RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 NXF3Q9H4D5 531 aaKnown RBP10.34□□□□□ -0.75
UBFD1-202ENST00000563366 APOBEC3GQ9HC16 384 aaKnown RBP10.34□□□□□ -0.75
UBFD1-202ENST00000563366 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.34□□□□□ -0.75
UBFD1-202ENST00000563366 CISHQ9NSE2 258 aa10.34□□□□□ -0.75
UBFD1-202ENST00000563366 TRIM10Q9UDY6 481 aa10.34□□□□□ -0.75
UBFD1-202ENST00000563366 LCMT1Q9UIC8 334 aa10.34□□□□□ -0.75
UBFD1-202ENST00000563366 SIX4Q9UIU6 781 aa10.34□□□□□ -0.75
UBFD1-202ENST00000563366 CDC23Q9UJX2 597 aa10.34□□□□□ -0.75
UBFD1-202ENST00000563366 ST3GAL5Q9UNP4 418 aa10.34□□□□□ -0.75
UBFD1-202ENST00000563366 AGAP1Q9UPQ3 857 aa10.34□□□□□ -0.75
UBFD1-202ENST00000563366 PTPN22Q9Y2R2 807 aa10.34□□□□□ -0.75
UBFD1-202ENST00000563366 IPPQ9Y573 584 aa10.34□□□□□ -0.75
UBFD1-202ENST00000563366 MRFAP1Q9Y605 127 aa10.34□□□□□ -0.75
UBFD1-202ENST00000563366 SAR1BQ9Y6B6 198 aa10.34□□□□□ -0.75
UBFD1-202ENST00000563366 TDRD15B5MCY1 1934 aaKnown RBP10.34□□□□□ -0.75
UBFD1-202ENST00000563366 TANC1Q9C0D5 1861 aa10.34□□□□□ -0.75
UBFD1-202ENST00000563366 GRIN2DO15399 1336 aa10.33□□□□□ -0.76
UBFD1-202ENST00000563366 UQCRHLA0A096LP55 91 aa10.33□□□□□ -0.76
UBFD1-202ENST00000563366 ARVCFO00192 962 aa10.33□□□□□ -0.76
UBFD1-202ENST00000563366 THAP12O43422 761 aa10.33□□□□□ -0.76
UBFD1-202ENST00000563366 MOCS3O95396 460 aa10.33□□□□□ -0.76
UBFD1-202ENST00000563366 CHRNA1P02708 482 aa10.33□□□□□ -0.76
UBFD1-202ENST00000563366 UQCRHP07919 91 aa10.33□□□□□ -0.76
UBFD1-202ENST00000563366 MMEP08473 750 aa10.33□□□□□ -0.76
UBFD1-202ENST00000563366 ITGA4P13612 1032 aa10.33□□□□□ -0.76
UBFD1-202ENST00000563366 HSPA6P17066 643 aa10.33□□□□□ -0.76
UBFD1-202ENST00000563366 PAX3P23760 479 aa10.33□□□□□ -0.76
UBFD1-202ENST00000563366 NOP2P46087 812 aaKnown RBP10.33□□□□□ -0.76
UBFD1-202ENST00000563366 NSFP46459 744 aaKnown RBP10.33□□□□□ -0.76
UBFD1-202ENST00000563366 ZNF132P52740 706 aa10.33□□□□□ -0.76
UBFD1-202ENST00000563366 HTRA3P83110 453 aa10.33□□□□□ -0.76
UBFD1-202ENST00000563366 FMO1Q01740 532 aa10.33□□□□□ -0.76
UBFD1-202ENST00000563366 CKAP4Q07065 602 aaKnown RBP10.33□□□□□ -0.76
UBFD1-202ENST00000563366 NFX1Q12986 1120 aaKnown RBP10.33□□□□□ -0.76
UBFD1-202ENST00000563366 STILQ15468 1287 aa10.33□□□□□ -0.76
UBFD1-202ENST00000563366 ZBTB6Q15916 424 aa10.33□□□□□ -0.76
UBFD1-202ENST00000563366 CLEC16AQ2KHT3 1053 aa10.33□□□□□ -0.76
UBFD1-202ENST00000563366 SV2CQ496J9 727 aa10.33□□□□□ -0.76
UBFD1-202ENST00000563366 TAF3Q5VWG9 929 aa10.33□□□□□ -0.76
UBFD1-202ENST00000563366 ANKMY2Q8IV38 441 aa10.33□□□□□ -0.76
UBFD1-202ENST00000563366 MSANTD4Q8NCY6 345 aa10.33□□□□□ -0.76
UBFD1-202ENST00000563366 OLIG1Q8TAK6 271 aa10.33□□□□□ -0.76
UBFD1-202ENST00000563366 DDX1Q92499 740 aaKnown RBP10.33□□□□□ -0.76
UBFD1-202ENST00000563366 PGBD4Q96DM1 585 aa10.33□□□□□ -0.76
UBFD1-202ENST00000563366 RPS6KC1Q96S38 1066 aa10.33□□□□□ -0.76
UBFD1-202ENST00000563366 PACSIN1Q9BY11 444 aa10.33□□□□□ -0.76
UBFD1-202ENST00000563366 ERVK-5Q9HDB9 667 aa10.33□□□□□ -0.76
UBFD1-202ENST00000563366 PAK6Q9NQU5 681 aaPredicted RBP10.33□□□□□ -0.76
UBFD1-202ENST00000563366 FAM105AQ9NUU6 356 aa10.33□□□□□ -0.76
UBFD1-202ENST00000563366 UVRAGQ9P2Y5 699 aa10.33□□□□□ -0.76
UBFD1-202ENST00000563366 NXF1Q9UBU9 619 aaKnown RBP10.33□□□□□ -0.76
UBFD1-202ENST00000563366 PARP2Q9UGN5 583 aa10.33□□□□□ -0.76
UBFD1-202ENST00000563366 GTF3C4Q9UKN8 822 aa10.33□□□□□ -0.76
UBFD1-202ENST00000563366 KIAA1257Q9ULG3 409 aa10.33□□□□□ -0.76
UBFD1-202ENST00000563366 GIT1Q9Y2X7 761 aa10.33□□□□□ -0.76
UBFD1-202ENST00000563366 HYOU1Q9Y4L1 999 aa10.33□□□□□ -0.76
UBFD1-202ENST00000563366 CAPN6Q9Y6Q1 641 aa10.33□□□□□ -0.76
UBFD1-202ENST00000563366 DUSP10Q9Y6W6 482 aa10.33□□□□□ -0.76
UBFD1-202ENST00000563366 CARNS1A5YM72 827 aa10.32□□□□□ -0.76
UBFD1-202ENST00000563366 CES2O00748 559 aa10.32□□□□□ -0.76
UBFD1-202ENST00000563366 DYNC1I1O14576 645 aa10.32□□□□□ -0.76
UBFD1-202ENST00000563366 BUB1O43683 1085 aa10.32□□□□□ -0.76
UBFD1-202ENST00000563366 ZNF623O75123 536 aa10.32□□□□□ -0.76
UBFD1-202ENST00000563366 MTA2O94776 668 aa10.32□□□□□ -0.76
UBFD1-202ENST00000563366 ABL1P00519 1130 aa10.32□□□□□ -0.76
UBFD1-202ENST00000563366 FTLP02792 175 aaPredicted RBP10.32□□□□□ -0.76
UBFD1-202ENST00000563366 CAPN2P17655 700 aa10.32□□□□□ -0.76
UBFD1-202ENST00000563366 CHRNB2P17787 502 aa10.32□□□□□ -0.76
UBFD1-202ENST00000563366 ABCB4P21439 1286 aa10.32□□□□□ -0.76
UBFD1-202ENST00000563366 CENPCQ03188 943 aa10.32□□□□□ -0.76
UBFD1-202ENST00000563366 INCA1Q0VD86 236 aa10.32□□□□□ -0.76
UBFD1-202ENST00000563366 BFSP2Q13515 415 aa10.32□□□□□ -0.76
UBFD1-202ENST00000563366 CLUL1Q15846 466 aa10.32□□□□□ -0.76
UBFD1-202ENST00000563366 LIN9Q5TKA1 542 aa10.32□□□□□ -0.76
UBFD1-202ENST00000563366 TMEM164Q5U3C3 297 aa10.32□□□□□ -0.76
UBFD1-202ENST00000563366 ACAD10Q6JQN1 1059 aa10.32□□□□□ -0.76
UBFD1-202ENST00000563366 SMG8Q8ND04 991 aaKnown RBP10.32□□□□□ -0.76
UBFD1-202ENST00000563366 CXorf38Q8TB03 319 aa10.32□□□□□ -0.76
UBFD1-202ENST00000563366 FAM84AQ96KN4 292 aa10.32□□□□□ -0.76
UBFD1-202ENST00000563366 APOL6Q9BWW8 343 aa10.32□□□□□ -0.76
UBFD1-202ENST00000563366 FTHL17Q9BXU8 183 aa10.32□□□□□ -0.76
UBFD1-202ENST00000563366 AVENQ9NQS1 362 aaPredicted RBP10.32□□□□□ -0.76
UBFD1-202ENST00000563366 TMPRSS4Q9NRS4 437 aa10.32□□□□□ -0.76
UBFD1-202ENST00000563366 RNF14Q9UBS8 474 aa10.32□□□□□ -0.76
UBFD1-202ENST00000563366 PADI3Q9ULW8 664 aa10.32□□□□□ -0.76
UBFD1-202ENST00000563366 TFR2Q9UP52 801 aa10.32□□□□□ -0.76
UBFD1-202ENST00000563366 SCINQ9Y6U3 715 aa10.32□□□□□ -0.76
UBFD1-202ENST00000563366 UMODL1Q5DID0 1318 aa10.32□□□□□ -0.76
UBFD1-202ENST00000563366 SMIM28A0A1B0GU29 152 aa10.31□□□□□ -0.76
UBFD1-202ENST00000563366 EFCAB8A8MWE9 144 aa10.31□□□□□ -0.76
UBFD1-202ENST00000563366 TMCO5BA8MYB1 307 aa10.31□□□□□ -0.76
UBFD1-202ENST00000563366 FANCGO15287 622 aa10.31□□□□□ -0.76
UBFD1-202ENST00000563366 MEFVO15553 781 aaPredicted RBP10.31□□□□□ -0.76
UBFD1-202ENST00000563366 CTIFO43310 598 aaKnown RBP10.31□□□□□ -0.76
UBFD1-202ENST00000563366 PALMO75781 387 aa10.31□□□□□ -0.76
UBFD1-202ENST00000563366 PARNO95453 639 aaKnown RBP10.31□□□□□ -0.76
UBFD1-202ENST00000563366 CYP1A1P04798 512 aaPredicted RBP10.31□□□□□ -0.76
UBFD1-202ENST00000563366 FAM163BP0C2L3 166 aa10.31□□□□□ -0.76
UBFD1-202ENST00000563366 GHRP10912 638 aa10.31□□□□□ -0.76
UBFD1-202ENST00000563366 CKBP12277 381 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms