RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 DAXXQ9UER7 740 aaPredicted RBP8.45□□□□□ -1.06
HERPUD1-206ENST00000563343 ASB3Q9Y575 518 aa8.45□□□□□ -1.06
HERPUD1-206ENST00000563343 ABLIM1O14639 778 aa8.44□□□□□ -1.06
HERPUD1-206ENST00000563343 CCNT1O60563 726 aaKnown RBP8.44□□□□□ -1.06
HERPUD1-206ENST00000563343 GJB3O75712 270 aa8.44□□□□□ -1.06
HERPUD1-206ENST00000563343 SOAT2O75908 522 aa8.44□□□□□ -1.06
HERPUD1-206ENST00000563343 FGF19O95750 216 aa8.44□□□□□ -1.06
HERPUD1-206ENST00000563343 PLA2G2AP14555 144 aa8.44□□□□□ -1.06
HERPUD1-206ENST00000563343 PDIA3P30101 505 aaKnown RBP8.44□□□□□ -1.06
HERPUD1-206ENST00000563343 RPL9P32969 192 aaKnown RBP8.44□□□□□ -1.06
HERPUD1-206ENST00000563343 MCM4P33991 863 aa8.44□□□□□ -1.06
HERPUD1-206ENST00000563343 PTGER3P43115 390 aa8.44□□□□□ -1.06
HERPUD1-206ENST00000563343 NAMPTP43490 491 aa8.44□□□□□ -1.06
HERPUD1-206ENST00000563343 AARSP49588 968 aaKnown RBP eCLIP8.44□□□□□ -1.06
HERPUD1-206ENST00000563343 C19orf57Q0VDD7 668 aa8.44□□□□□ -1.06
HERPUD1-206ENST00000563343 ARHGAP15Q53QZ3 475 aa8.44□□□□□ -1.06
HERPUD1-206ENST00000563343 ATF7IP2Q5U623 682 aa8.44□□□□□ -1.06
HERPUD1-206ENST00000563343 DIEXFQ68CQ4 756 aaKnown RBP8.44□□□□□ -1.06
HERPUD1-206ENST00000563343 ANO7Q6IWH7 933 aa8.44□□□□□ -1.06
HERPUD1-206ENST00000563343 SYT12Q8IV01 421 aa8.44□□□□□ -1.06
HERPUD1-206ENST00000563343 CMTM8Q8IZV2 173 aa8.44□□□□□ -1.06
HERPUD1-206ENST00000563343 FRMD1Q8N878 549 aa8.44□□□□□ -1.06
HERPUD1-206ENST00000563343 ATAD1Q8NBU5 361 aa8.44□□□□□ -1.06
HERPUD1-206ENST00000563343 MCPH1Q8NEM0 835 aa8.44□□□□□ -1.06
HERPUD1-206ENST00000563343 APPL2Q8NEU8 664 aa8.44□□□□□ -1.06
HERPUD1-206ENST00000563343 KCNB2Q92953 911 aa8.44□□□□□ -1.06
HERPUD1-206ENST00000563343 USP13Q92995 863 aaPredicted RBP8.44□□□□□ -1.06
HERPUD1-206ENST00000563343 ACDQ96AP0 544 aa8.44□□□□□ -1.06
HERPUD1-206ENST00000563343 CAMK1GQ96NX5 476 aa8.44□□□□□ -1.06
HERPUD1-206ENST00000563343 LPIN3Q9BQK8 851 aa8.44□□□□□ -1.06
HERPUD1-206ENST00000563343 KIFC3Q9BVG8 833 aa8.44□□□□□ -1.06
HERPUD1-206ENST00000563343 CAPN10Q9HC96 672 aa8.44□□□□□ -1.06
HERPUD1-206ENST00000563343 THG1LQ9NWX6 298 aaKnown RBP8.44□□□□□ -1.06
HERPUD1-206ENST00000563343 CNTN3Q9P232 1028 aa8.44□□□□□ -1.06
HERPUD1-206ENST00000563343 PILRBQ9UKJ0 227 aa8.44□□□□□ -1.06
HERPUD1-206ENST00000563343 KCNJ14Q9UNX9 436 aa8.44□□□□□ -1.06
HERPUD1-206ENST00000563343 TNFSF13BQ9Y275 285 aa8.44□□□□□ -1.06
HERPUD1-206ENST00000563343 SLC27A5Q9Y2P5 690 aa8.44□□□□□ -1.06
HERPUD1-206ENST00000563343 NUB1Q9Y5A7 615 aa8.44□□□□□ -1.06
HERPUD1-206ENST00000563343 ATMQ13315 3056 aa8.44□□□□□ -1.06
HERPUD1-206ENST00000563343 TMEM131Q92545 1883 aa8.43□□□□□ -1.06
HERPUD1-206ENST00000563343 TP53BP1Q12888 1972 aaPredicted RBP8.43□□□□□ -1.06
HERPUD1-206ENST00000563343 A0A087WV48 116 aa8.43□□□□□ -1.06
HERPUD1-206ENST00000563343 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.43□□□□□ -1.06
HERPUD1-206ENST00000563343 FAM205CA6NFA0 338 aa8.43□□□□□ -1.06
HERPUD1-206ENST00000563343 EIF4E1BA6NMX2 242 aaKnown RBP8.43□□□□□ -1.06
HERPUD1-206ENST00000563343 DEXIO95424 95 aa8.43□□□□□ -1.06
HERPUD1-206ENST00000563343 LARGE1O95461 756 aa8.43□□□□□ -1.06
HERPUD1-206ENST00000563343 HMGB1P09429 215 aaKnown RBP8.43□□□□□ -1.06
HERPUD1-206ENST00000563343 FTH1P19P0C7X4 201 aa8.43□□□□□ -1.06
HERPUD1-206ENST00000563343 SPATA31C1P0DKV0 1188 aa8.43□□□□□ -1.06
HERPUD1-206ENST00000563343 ATF6P18850 670 aa8.43□□□□□ -1.06
HERPUD1-206ENST00000563343 LIG1P18858 919 aa8.43□□□□□ -1.06
HERPUD1-206ENST00000563343 PROZP22891 400 aa8.43□□□□□ -1.06
HERPUD1-206ENST00000563343 RDXP35241 583 aaKnown RBP8.43□□□□□ -1.06
HERPUD1-206ENST00000563343 ALDH1A3P47895 512 aa8.43□□□□□ -1.06
HERPUD1-206ENST00000563343 OSTNP61366 133 aa8.43□□□□□ -1.06
HERPUD1-206ENST00000563343 CCT2P78371 535 aaKnown RBP8.43□□□□□ -1.06
HERPUD1-206ENST00000563343 YWHAHQ04917 246 aaPredicted RBP8.43□□□□□ -1.06
HERPUD1-206ENST00000563343 KRT32Q14532 448 aa8.43□□□□□ -1.06
HERPUD1-206ENST00000563343 TMEM132AQ24JP5 1023 aa8.43□□□□□ -1.06
HERPUD1-206ENST00000563343 TMEM92Q6UXU6 159 aa8.43□□□□□ -1.06
HERPUD1-206ENST00000563343 SLFN12Q8IYM2 578 aa8.43□□□□□ -1.06
HERPUD1-206ENST00000563343 TMEFF1Q8IYR6 380 aa8.43□□□□□ -1.06
HERPUD1-206ENST00000563343 PNPLA1Q8N8W4 532 aa8.43□□□□□ -1.06
HERPUD1-206ENST00000563343 TSTD1Q8NFU3 115 aa8.43□□□□□ -1.06
HERPUD1-206ENST00000563343 OR2I1PQ8NGU4 316 aa8.43□□□□□ -1.06
HERPUD1-206ENST00000563343 USP33Q8TEY7 942 aa8.43□□□□□ -1.06
HERPUD1-206ENST00000563343 CD101Q93033 1021 aa8.43□□□□□ -1.06
HERPUD1-206ENST00000563343 ACO2Q99798 780 aaKnown RBP8.43□□□□□ -1.06
HERPUD1-206ENST00000563343 CCDC94Q9BW85 323 aaPredicted RBP8.43□□□□□ -1.06
HERPUD1-206ENST00000563343 ECT2Q9H8V3 914 aa8.43□□□□□ -1.06
HERPUD1-206ENST00000563343 TOPORSQ9NS56 1045 aaPredicted RBP8.43□□□□□ -1.06
HERPUD1-206ENST00000563343 HSFX1Q9UBD0 423 aa8.43□□□□□ -1.06
HERPUD1-206ENST00000563343 TIMM13Q9Y5L4 95 aaPredicted RBP8.43□□□□□ -1.06
HERPUD1-206ENST00000563343 ATXN2Q99700 1313 aaKnown RBP8.43□□□□□ -1.06
HERPUD1-206ENST00000563343 HECTD1Q9ULT8 2610 aa8.42□□□□□ -1.06
HERPUD1-206ENST00000563343 OR6C75A6NL08 312 aa8.42□□□□□ -1.06
HERPUD1-206ENST00000563343 K7EQS6 105 aa8.42□□□□□ -1.06
HERPUD1-206ENST00000563343 TK2O00142 265 aa8.42□□□□□ -1.06
HERPUD1-206ENST00000563343 WNT7AO00755 349 aa8.42□□□□□ -1.06
HERPUD1-206ENST00000563343 PPP1R37O75864 691 aa8.42□□□□□ -1.06
HERPUD1-206ENST00000563343 F11P03951 625 aa8.42□□□□□ -1.06
HERPUD1-206ENST00000563343 CYP11B2P19099 503 aa8.42□□□□□ -1.06
HERPUD1-206ENST00000563343 ATP2B1P20020 1258 aa8.42□□□□□ -1.06
HERPUD1-206ENST00000563343 ITPKAP23677 461 aa8.42□□□□□ -1.06
HERPUD1-206ENST00000563343 CDC25CP30307 473 aa8.42□□□□□ -1.06
HERPUD1-206ENST00000563343 HOXD12P35452 270 aa8.42□□□□□ -1.06
HERPUD1-206ENST00000563343 AMPD2Q01433 879 aa8.42□□□□□ -1.06
HERPUD1-206ENST00000563343 SSRP1Q08945 709 aaKnown RBP8.42□□□□□ -1.06
HERPUD1-206ENST00000563343 HNRNPDQ14103 355 aaKnown RBP8.42□□□□□ -1.06
HERPUD1-206ENST00000563343 MYBPC2Q14324 1141 aa8.42□□□□□ -1.06
HERPUD1-206ENST00000563343 TRIP6Q15654 476 aaKnown RBP8.42□□□□□ -1.06
HERPUD1-206ENST00000563343 CRY1Q16526 586 aa8.42□□□□□ -1.06
HERPUD1-206ENST00000563343 GAB4Q2WGN9 574 aa8.42□□□□□ -1.06
HERPUD1-206ENST00000563343 SLC10A6Q3KNW5 377 aa8.42□□□□□ -1.06
HERPUD1-206ENST00000563343 MAP7D1Q3KQU3 841 aa8.42□□□□□ -1.06
HERPUD1-206ENST00000563343 SPDYCQ5MJ68 293 aa8.42□□□□□ -1.06
HERPUD1-206ENST00000563343 LARP1BQ659C4 914 aaKnown RBP8.42□□□□□ -1.06
HERPUD1-206ENST00000563343 ARMCX6Q7L4S7 300 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms