RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 MRPS6P82932 125 aaKnown RBP9.97□□□□□ -0.81
LINC00838-201ENST00000562956 MYO1EQ12965 1108 aa9.97□□□□□ -0.81
LINC00838-201ENST00000562956 LLGL1Q15334 1064 aa9.97□□□□□ -0.81
LINC00838-201ENST00000562956 PTPN20Q4JDL3 420 aa9.97□□□□□ -0.81
LINC00838-201ENST00000562956 FAM47CQ5HY64 1035 aa9.97□□□□□ -0.81
LINC00838-201ENST00000562956 SEL1L2Q5TEA6 688 aa9.97□□□□□ -0.81
LINC00838-201ENST00000562956 SMYD5Q6GMV2 418 aa9.97□□□□□ -0.81
LINC00838-201ENST00000562956 ERICH1Q86X53 443 aa9.97□□□□□ -0.81
LINC00838-201ENST00000562956 ARRDC4Q8NCT1 418 aa9.97□□□□□ -0.81
LINC00838-201ENST00000562956 SMG8Q8ND04 991 aaKnown RBP9.97□□□□□ -0.81
LINC00838-201ENST00000562956 BEST2Q8NFU1 509 aa9.97□□□□□ -0.81
LINC00838-201ENST00000562956 HEXIM2Q96MH2 286 aaKnown RBP9.97□□□□□ -0.81
LINC00838-201ENST00000562956 LHX5Q9H2C1 402 aa9.97□□□□□ -0.81
LINC00838-201ENST00000562956 BARX2Q9UMQ3 279 aaPredicted RBP9.97□□□□□ -0.81
LINC00838-201ENST00000562956 NFU1Q9UMS0 254 aa9.97□□□□□ -0.81
LINC00838-201ENST00000562956 IPPQ9Y573 584 aa9.97□□□□□ -0.81
LINC00838-201ENST00000562956 CEP83Q9Y592 693 aa9.97□□□□□ -0.81
LINC00838-201ENST00000562956 TMEM191CA6NGB0 347 aa9.97□□□□□ -0.81
LINC00838-201ENST00000562956 TTI1O43156 1089 aa9.97□□□□□ -0.81
LINC00838-201ENST00000562956 MICAL2O94851 1124 aa9.97□□□□□ -0.81
LINC00838-201ENST00000562956 ASGR1P07306 291 aa9.97□□□□□ -0.81
LINC00838-201ENST00000562956 CTSHP09668 335 aa9.97□□□□□ -0.81
LINC00838-201ENST00000562956 KCNA10Q16322 511 aa9.97□□□□□ -0.81
LINC00838-201ENST00000562956 DEFB115Q30KQ5 88 aa9.97□□□□□ -0.81
LINC00838-201ENST00000562956 C9orf57Q5W0N0 161 aa9.97□□□□□ -0.81
LINC00838-201ENST00000562956 MCEEQ96PE7 176 aa9.97□□□□□ -0.81
LINC00838-201ENST00000562956 MRPL45Q9BRJ2 306 aaKnown RBP9.97□□□□□ -0.81
LINC00838-201ENST00000562956 UBXN6Q9BZV1 441 aa9.97□□□□□ -0.81
LINC00838-201ENST00000562956 SLITRK6Q9H5Y7 841 aa9.97□□□□□ -0.81
LINC00838-201ENST00000562956 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.97□□□□□ -0.81
LINC00838-201ENST00000562956 SNX9Q9Y5X1 595 aa9.97□□□□□ -0.81
LINC00838-201ENST00000562956 TOMM70O94826 608 aa9.96□□□□□ -0.81
LINC00838-201ENST00000562956 CHRNA1P02708 482 aa9.96□□□□□ -0.81
LINC00838-201ENST00000562956 TAS2R40P59535 323 aa9.96□□□□□ -0.81
LINC00838-201ENST00000562956 ZNF252P-AS1Q0IIN9 211 aa9.96□□□□□ -0.81
LINC00838-201ENST00000562956 CLUL1Q15846 466 aa9.96□□□□□ -0.81
LINC00838-201ENST00000562956 PPP1R15BQ5SWA1 713 aa9.96□□□□□ -0.81
LINC00838-201ENST00000562956 TWF2Q6IBS0 349 aaKnown RBP9.96□□□□□ -0.81
LINC00838-201ENST00000562956 DNAJC24Q6P3W2 148 aa9.96□□□□□ -0.81
LINC00838-201ENST00000562956 DPH6Q7L8W6 267 aa9.96□□□□□ -0.81
LINC00838-201ENST00000562956 SERINC5Q86VE9 423 aa9.96□□□□□ -0.81
LINC00838-201ENST00000562956 PRELID2Q8N945 189 aa9.96□□□□□ -0.81
LINC00838-201ENST00000562956 DDX27Q96GQ7 796 aaKnown RBP9.96□□□□□ -0.81
LINC00838-201ENST00000562956 CPXM1Q96SM3 734 aa9.96□□□□□ -0.81
LINC00838-201ENST00000562956 GOLGA2P5Q9HBQ8 144 aa9.96□□□□□ -0.81
LINC00838-201ENST00000562956 NME7Q9Y5B8 376 aa9.96□□□□□ -0.81
LINC00838-201ENST00000562956 GRIN2DO15399 1336 aa9.96□□□□□ -0.81
LINC00838-201ENST00000562956 GOLGA6L10A0A0M3HER8 536 aa9.96□□□□□ -0.81
LINC00838-201ENST00000562956 FAM153BP0C7A2 387 aa9.96□□□□□ -0.81
LINC00838-201ENST00000562956 CYP3A5P20815 502 aa9.96□□□□□ -0.81
LINC00838-201ENST00000562956 OGDHQ02218 1023 aa9.96□□□□□ -0.81
LINC00838-201ENST00000562956 SMC1AQ14683 1233 aaKnown RBP9.96□□□□□ -0.81
LINC00838-201ENST00000562956 FAM153CQ494X1 144 aa9.96□□□□□ -0.81
LINC00838-201ENST00000562956 XKR4Q5GH76 650 aa9.96□□□□□ -0.81
LINC00838-201ENST00000562956 CCSAPQ6IQ19 270 aaPredicted RBP9.96□□□□□ -0.81
LINC00838-201ENST00000562956 SND1Q7KZF4 910 aaKnown RBP eCLIP9.96□□□□□ -0.81
LINC00838-201ENST00000562956 SLC13A5Q86YT5 568 aaPredicted RBP9.96□□□□□ -0.81
LINC00838-201ENST00000562956 GPATCH11Q8N954 259 aa9.96□□□□□ -0.81
LINC00838-201ENST00000562956 C12orf29Q8N999 325 aa9.96□□□□□ -0.81
LINC00838-201ENST00000562956 KLHDC9Q8NEP7 349 aa9.96□□□□□ -0.81
LINC00838-201ENST00000562956 C18orf8Q96DM3 657 aa9.96□□□□□ -0.81
LINC00838-201ENST00000562956 FAM153AQ9UHL3 310 aa9.96□□□□□ -0.81
LINC00838-201ENST00000562956 UBQLN1Q9UMX0 589 aaKnown RBP9.96□□□□□ -0.81
LINC00838-201ENST00000562956 USTQ9Y2C2 406 aa9.96□□□□□ -0.81
LINC00838-201ENST00000562956 TRPV2Q9Y5S1 764 aa9.96□□□□□ -0.81
LINC00838-201ENST00000562956 TRIP12Q14669 1992 aaPredicted RBP9.96□□□□□ -0.82
LINC00838-201ENST00000562956 BHMG1C9JSJ3 638 aaPredicted RBP9.96□□□□□ -0.82
LINC00838-201ENST00000562956 M0QYV0 167 aa9.96□□□□□ -0.82
LINC00838-201ENST00000562956 M0QZ92 97 aa9.96□□□□□ -0.82
LINC00838-201ENST00000562956 TRPA1O75762 1119 aa9.96□□□□□ -0.82
LINC00838-201ENST00000562956 ERBB2P04626 1255 aa9.96□□□□□ -0.82
LINC00838-201ENST00000562956 VDRP11473 427 aa9.96□□□□□ -0.82
LINC00838-201ENST00000562956 KCNE1P15382 129 aa9.96□□□□□ -0.82
LINC00838-201ENST00000562956 TCF4P15884 667 aa9.96□□□□□ -0.82
LINC00838-201ENST00000562956 EPHB4P54760 987 aa9.96□□□□□ -0.82
LINC00838-201ENST00000562956 SOX4Q06945 474 aaPredicted RBP9.96□□□□□ -0.82
LINC00838-201ENST00000562956 SIX1Q15475 284 aaPredicted RBP9.96□□□□□ -0.82
LINC00838-201ENST00000562956 CNGA2Q16280 664 aa9.96□□□□□ -0.82
LINC00838-201ENST00000562956 SGO2Q562F6 1265 aa9.96□□□□□ -0.82
LINC00838-201ENST00000562956 SESTD1Q86VW0 696 aa9.96□□□□□ -0.82
LINC00838-201ENST00000562956 DDX42Q86XP3 938 aaKnown RBP eCLIP9.96□□□□□ -0.82
LINC00838-201ENST00000562956 LRRC52Q8N7C0 313 aa9.96□□□□□ -0.82
LINC00838-201ENST00000562956 C3orf20Q8ND61 904 aa9.96□□□□□ -0.82
LINC00838-201ENST00000562956 CCDC26Q8TAB7 109 aa9.96□□□□□ -0.82
LINC00838-201ENST00000562956 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.96□□□□□ -0.82
LINC00838-201ENST00000562956 UBA3Q8TBC4 463 aa9.96□□□□□ -0.82
LINC00838-201ENST00000562956 NT5C1AQ9BXI3 368 aa9.96□□□□□ -0.82
LINC00838-201ENST00000562956 OSBPL7Q9BZF2 842 aa9.96□□□□□ -0.82
LINC00838-201ENST00000562956 SENP6Q9GZR1 1112 aaPredicted RBP9.96□□□□□ -0.82
LINC00838-201ENST00000562956 IP6K2Q9UHH9 426 aa9.96□□□□□ -0.82
LINC00838-201ENST00000562956 HPCAL4Q9UM19 191 aa9.96□□□□□ -0.82
LINC00838-201ENST00000562956 ST3GAL5Q9UNP4 418 aa9.96□□□□□ -0.82
LINC00838-201ENST00000562956 CEP350Q5VT06 3117 aa9.95□□□□□ -0.82
LINC00838-201ENST00000562956 MEIS3P2A8K0S8 358 aa9.95□□□□□ -0.82
LINC00838-201ENST00000562956 F8VP50 259 aa9.95□□□□□ -0.82
LINC00838-201ENST00000562956 GOLGA8SH3BPF8 625 aa9.95□□□□□ -0.82
LINC00838-201ENST00000562956 H3BQF6 201 aa9.95□□□□□ -0.82
LINC00838-201ENST00000562956 SPTLC1O15269 473 aa9.95□□□□□ -0.82
LINC00838-201ENST00000562956 HMGCRP04035 888 aa9.95□□□□□ -0.82
LINC00838-201ENST00000562956 RARAP10276 462 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms