RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 DPP3Q9NY33 737 aa17.92■□□□□ 0.46
CMTM3-205ENST00000562707 C2CD2Q9Y426 696 aa17.92■□□□□ 0.46
CMTM3-205ENST00000562707 ANKRD63C9JTQ0 380 aa17.91■□□□□ 0.46
CMTM3-205ENST00000562707 ATG13O75143 517 aa17.91■□□□□ 0.46
CMTM3-205ENST00000562707 HAPLN1P10915 354 aaPredicted RBP17.91■□□□□ 0.46
CMTM3-205ENST00000562707 NMT1P30419 496 aaKnown RBP17.91■□□□□ 0.46
CMTM3-205ENST00000562707 AVPR1AP37288 418 aa17.91■□□□□ 0.46
CMTM3-205ENST00000562707 CDR1P51861 262 aa17.91■□□□□ 0.46
CMTM3-205ENST00000562707 GRSF1Q12849 480 aaKnown RBP eCLIP17.91■□□□□ 0.46
CMTM3-205ENST00000562707 DCP1BQ8IZD4 617 aaKnown RBP17.91■□□□□ 0.46
CMTM3-205ENST00000562707 CMTM8Q8IZV2 173 aa17.91■□□□□ 0.46
CMTM3-205ENST00000562707 DDX1Q92499 740 aaKnown RBP17.91■□□□□ 0.46
CMTM3-205ENST00000562707 RAD54LQ92698 747 aa17.91■□□□□ 0.46
CMTM3-205ENST00000562707 SMG9Q9H0W8 520 aaKnown RBP17.91■□□□□ 0.46
CMTM3-205ENST00000562707 BLOC1S4Q9NUP1 217 aa17.91■□□□□ 0.46
CMTM3-205ENST00000562707 C2orf42Q9NWW7 574 aa17.91■□□□□ 0.46
CMTM3-205ENST00000562707 ABI2Q9NYB9 513 aaPredicted RBP17.91■□□□□ 0.46
CMTM3-205ENST00000562707 AGO2Q9UKV8 859 aaKnown RBP17.91■□□□□ 0.46
CMTM3-205ENST00000562707 COL4A2P08572 1712 aa17.9■□□□□ 0.46
CMTM3-205ENST00000562707 BMP15O95972 392 aa17.9■□□□□ 0.46
CMTM3-205ENST00000562707 PLCG1P19174 1290 aa17.9■□□□□ 0.46
CMTM3-205ENST00000562707 GJB2P29033 226 aa17.9■□□□□ 0.46
CMTM3-205ENST00000562707 LONP1P36776 959 aaKnown RBP17.9■□□□□ 0.46
CMTM3-205ENST00000562707 AMPD2Q01433 879 aa17.9■□□□□ 0.46
CMTM3-205ENST00000562707 POU5F1Q01860 360 aaKnown RBP17.9■□□□□ 0.46
CMTM3-205ENST00000562707 BFSP1Q12934 665 aa17.9■□□□□ 0.46
CMTM3-205ENST00000562707 RUNX3Q13761 415 aa17.9■□□□□ 0.46
CMTM3-205ENST00000562707 RABEP1Q15276 862 aa17.9■□□□□ 0.46
CMTM3-205ENST00000562707 SV2CQ496J9 727 aa17.9■□□□□ 0.46
CMTM3-205ENST00000562707 WSCD1Q658N2 575 aa17.9■□□□□ 0.46
CMTM3-205ENST00000562707 KRI1Q8N9T8 703 aaKnown RBP17.9■□□□□ 0.46
CMTM3-205ENST00000562707 SLC8A2Q9UPR5 921 aa17.9■□□□□ 0.46
CMTM3-205ENST00000562707 PCDHB5Q9Y5E4 795 aa17.9■□□□□ 0.46
CMTM3-205ENST00000562707 CITO14578 2027 aa17.89■□□□□ 0.46
CMTM3-205ENST00000562707 KPNA7A9QM74 516 aa17.89■□□□□ 0.45
CMTM3-205ENST00000562707 TULP1O00294 542 aaPredicted RBP17.89■□□□□ 0.45
CMTM3-205ENST00000562707 AXIN1O15169 862 aa17.89■□□□□ 0.45
CMTM3-205ENST00000562707 EXTL3O43909 919 aa17.89■□□□□ 0.45
CMTM3-205ENST00000562707 GDF9O60383 454 aa17.89■□□□□ 0.45
CMTM3-205ENST00000562707 DDX6P26196 483 aaKnown RBP eCLIP17.89■□□□□ 0.45
CMTM3-205ENST00000562707 TSPY1Q01534 308 aa17.89■□□□□ 0.45
CMTM3-205ENST00000562707 KARSQ15046 597 aaKnown RBP17.89■□□□□ 0.45
CMTM3-205ENST00000562707 POSTNQ15063 836 aa17.89■□□□□ 0.45
CMTM3-205ENST00000562707 AASDHQ4L235 1098 aaPredicted RBP17.89■□□□□ 0.45
CMTM3-205ENST00000562707 ZC2HC1CQ53FD0 456 aaPredicted RBP17.89■□□□□ 0.45
CMTM3-205ENST00000562707 IL31Q6EBC2 164 aa17.89■□□□□ 0.45
CMTM3-205ENST00000562707 CC2D1AQ6P1N0 951 aaPredicted RBP17.89■□□□□ 0.45
CMTM3-205ENST00000562707 CACNA2D4Q7Z3S7 1137 aa17.89■□□□□ 0.45
CMTM3-205ENST00000562707 LRRTM3Q86VH5 581 aa17.89■□□□□ 0.45
CMTM3-205ENST00000562707 MAB21L3Q8N8X9 362 aa17.89■□□□□ 0.45
CMTM3-205ENST00000562707 C12orf50Q8NA57 414 aaPredicted RBP17.89■□□□□ 0.45
CMTM3-205ENST00000562707 LOXL4Q96JB6 756 aa17.89■□□□□ 0.45
CMTM3-205ENST00000562707 FIZ1Q96SL8 496 aa17.89■□□□□ 0.45
CMTM3-205ENST00000562707 FAM83CQ9BQN1 747 aa17.89■□□□□ 0.45
CMTM3-205ENST00000562707 CCSER1Q9C0I3 900 aa17.89■□□□□ 0.45
CMTM3-205ENST00000562707 STYXL1Q9Y6J8 313 aa17.89■□□□□ 0.45
CMTM3-205ENST00000562707 TICRRQ7Z2Z1 1910 aa17.88■□□□□ 0.45
CMTM3-205ENST00000562707 CCDC163A0A0D9SF12 145 aa17.88■□□□□ 0.45
CMTM3-205ENST00000562707 RPP40O75818 363 aaKnown RBP17.88■□□□□ 0.45
CMTM3-205ENST00000562707 KRT37O76014 449 aa17.88■□□□□ 0.45
CMTM3-205ENST00000562707 F11P03951 625 aa17.88■□□□□ 0.45
CMTM3-205ENST00000562707 DDIT3P35638 169 aa17.88■□□□□ 0.45
CMTM3-205ENST00000562707 PNPLA4P41247 253 aa17.88■□□□□ 0.45
CMTM3-205ENST00000562707 NLRP12P59046 1061 aa17.88■□□□□ 0.45
CMTM3-205ENST00000562707 TMEM196Q5HYL7 178 aa17.88■□□□□ 0.45
CMTM3-205ENST00000562707 NT5DC4Q86YG4 428 aa17.88■□□□□ 0.45
CMTM3-205ENST00000562707 LRRC15Q8TF66 581 aa17.88■□□□□ 0.45
CMTM3-205ENST00000562707 GAB3Q8WWW8 586 aa17.88■□□□□ 0.45
CMTM3-205ENST00000562707 POMGNT1Q8WZA1 660 aa17.88■□□□□ 0.45
CMTM3-205ENST00000562707 LARP4BQ92615 738 aaKnown RBP17.88■□□□□ 0.45
CMTM3-205ENST00000562707 MRPS31Q92665 395 aaKnown RBP17.88■□□□□ 0.45
CMTM3-205ENST00000562707 EXOC4Q96A65 974 aa17.88■□□□□ 0.45
CMTM3-205ENST00000562707 TMX3Q96JJ7 454 aa17.88■□□□□ 0.45
CMTM3-205ENST00000562707 CHAMP1Q96JM3 812 aa17.88■□□□□ 0.45
CMTM3-205ENST00000562707 ZNF560Q96MR9 790 aa17.88■□□□□ 0.45
CMTM3-205ENST00000562707 ARRDC1-AS1Q9H2J1 176 aa17.88■□□□□ 0.45
CMTM3-205ENST00000562707 ST6GALNAC4Q9H4F1 302 aa17.88■□□□□ 0.45
CMTM3-205ENST00000562707 KIF9Q9HAQ2 790 aa17.88■□□□□ 0.45
CMTM3-205ENST00000562707 TDP1Q9NUW8 608 aa17.88■□□□□ 0.45
CMTM3-205ENST00000562707 SOBPA7XYQ1 873 aa17.87■□□□□ 0.45
CMTM3-205ENST00000562707 TISP43B9A030 160 aa17.87■□□□□ 0.45
CMTM3-205ENST00000562707 TRDMT1O14717 391 aaKnown RBP17.87■□□□□ 0.45
CMTM3-205ENST00000562707 PRPF40AO75400 957 aaKnown RBP17.87■□□□□ 0.45
CMTM3-205ENST00000562707 IL18RAPO95256 599 aa17.87■□□□□ 0.45
CMTM3-205ENST00000562707 CSH1P0DML2 217 aa17.87■□□□□ 0.45
CMTM3-205ENST00000562707 CSH2P0DML3 217 aa17.87■□□□□ 0.45
CMTM3-205ENST00000562707 CCDC192P0DO97 292 aa17.87■□□□□ 0.45
CMTM3-205ENST00000562707 HMGA1P17096 107 aaKnown RBP17.87■□□□□ 0.45
CMTM3-205ENST00000562707 KCNA4P22459 653 aa17.87■□□□□ 0.45
CMTM3-205ENST00000562707 HOXC13P31276 330 aa17.87■□□□□ 0.45
CMTM3-205ENST00000562707 PXNP49023 591 aaPredicted RBP17.87■□□□□ 0.45
CMTM3-205ENST00000562707 NFE2Q16621 373 aaPredicted RBP17.87■□□□□ 0.45
CMTM3-205ENST00000562707 USP13Q92995 863 aaPredicted RBP17.87■□□□□ 0.45
CMTM3-205ENST00000562707 EBF3Q9H4W6 596 aa17.87■□□□□ 0.45
CMTM3-205ENST00000562707 MAGED2Q9UNF1 606 aaPredicted RBP17.87■□□□□ 0.45
CMTM3-205ENST00000562707 SMC3Q9UQE7 1217 aa17.87■□□□□ 0.45
CMTM3-205ENST00000562707 LARP1BQ659C4 914 aaKnown RBP17.86■□□□□ 0.45
CMTM3-205ENST00000562707 TXNDC8Q6A555 127 aa17.86■□□□□ 0.45
CMTM3-205ENST00000562707 TRIM68Q6AZZ1 485 aa17.86■□□□□ 0.45
CMTM3-205ENST00000562707 FSTL4Q6MZW2 842 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms