RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 FAM81BQ96LP2 452 aa17.49■□□□□ 0.39
USB1-206ENST00000562534 VPS16Q9H269 839 aa17.49■□□□□ 0.39
USB1-206ENST00000562534 HSD3B7Q9H2F3 369 aa17.49■□□□□ 0.39
USB1-206ENST00000562534 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.49■□□□□ 0.393e-9■■■■■ 81.5
USB1-206ENST00000562534 DZANK1Q9NVP4 752 aa17.49■□□□□ 0.39
USB1-206ENST00000562534 AFF4Q9UHB7 1163 aaKnown RBP17.49■□□□□ 0.39
USB1-206ENST00000562534 VWA8A3KMH1 1905 aa17.49■□□□□ 0.39
USB1-206ENST00000562534 WDR27A2RRH5 827 aa17.48■□□□□ 0.39
USB1-206ENST00000562534 A8MXQ7 604 aa17.48■□□□□ 0.39
USB1-206ENST00000562534 LINC01565O15544 149 aa17.48■□□□□ 0.39
USB1-206ENST00000562534 PDGFRBP09619 1106 aa17.48■□□□□ 0.39
USB1-206ENST00000562534 SPATA31D3P0C874 917 aa17.48■□□□□ 0.39
USB1-206ENST00000562534 YWHAEP62258 255 aaKnown RBP17.48■□□□□ 0.39
USB1-206ENST00000562534 NFE2Q16621 373 aaPredicted RBP17.48■□□□□ 0.39
USB1-206ENST00000562534 FKBP15Q5T1M5 1219 aa17.48■□□□□ 0.39
USB1-206ENST00000562534 SPATA31D4Q6ZUB0 917 aa17.48■□□□□ 0.39
USB1-206ENST00000562534 CCDC149Q6ZUS6 474 aa17.48■□□□□ 0.39
USB1-206ENST00000562534 OSTM1Q86WC4 334 aa17.48■□□□□ 0.39
USB1-206ENST00000562534 OR10T2Q8NGX3 314 aa17.48■□□□□ 0.39
USB1-206ENST00000562534 TNIP3Q96KP6 325 aa17.48■□□□□ 0.39
USB1-206ENST00000562534 SMYD3Q9H7B4 428 aa17.48■□□□□ 0.39
USB1-206ENST00000562534 TAB2Q9NYJ8 693 aa17.48■□□□□ 0.39
USB1-206ENST00000562534 HSFX1Q9UBD0 423 aa17.48■□□□□ 0.39
USB1-206ENST00000562534 BARX2Q9UMQ3 279 aaPredicted RBP17.48■□□□□ 0.39
USB1-206ENST00000562534 SPDYE4A6NLX3 237 aa17.47■□□□□ 0.39
USB1-206ENST00000562534 GLP2RO95838 553 aa17.47■□□□□ 0.39
USB1-206ENST00000562534 LTBRP36941 435 aa17.47■□□□□ 0.39
USB1-206ENST00000562534 COPB1P53618 953 aaKnown RBP17.47■□□□□ 0.39
USB1-206ENST00000562534 ADCY1Q08828 1119 aa17.47■□□□□ 0.39
USB1-206ENST00000562534 LRMPQ12912 555 aa17.47■□□□□ 0.39
USB1-206ENST00000562534 CUL2Q13617 745 aa17.47■□□□□ 0.39
USB1-206ENST00000562534 SLC39A12Q504Y0 691 aa17.47■□□□□ 0.39
USB1-206ENST00000562534 INTS6LQ5JSJ4 861 aaKnown RBP17.47■□□□□ 0.39
USB1-206ENST00000562534 ANKRD54Q6NXT1 300 aa17.47■□□□□ 0.39
USB1-206ENST00000562534 FAM171BQ6P995 826 aa17.47■□□□□ 0.39
USB1-206ENST00000562534 SCARA5Q6ZMJ2 495 aa17.47■□□□□ 0.39
USB1-206ENST00000562534 RNF19BQ6ZMZ0 732 aa17.47■□□□□ 0.39
USB1-206ENST00000562534 LUZP1Q86V48 1076 aa17.47■□□□□ 0.39
USB1-206ENST00000562534 LRRTM3Q86VH5 581 aa17.47■□□□□ 0.39
USB1-206ENST00000562534 TCEAL8Q8IYN2 117 aa17.47■□□□□ 0.39
USB1-206ENST00000562534 CRYBG2Q8N1P7 616 aa17.47■□□□□ 0.39
USB1-206ENST00000562534 VN1R2Q8NFZ6 395 aa17.47■□□□□ 0.39
USB1-206ENST00000562534 JAKMIP2Q96AA8 810 aa17.47■□□□□ 0.39
USB1-206ENST00000562534 TMEM209Q96SK2 561 aa17.47■□□□□ 0.39
USB1-206ENST00000562534 CRACR2AQ9BSW2 395 aa17.47■□□□□ 0.39
USB1-206ENST00000562534 INTS2Q9H0H0 1204 aaKnown RBP17.47■□□□□ 0.39
USB1-206ENST00000562534 SDCBP2Q9H190 292 aa17.47■□□□□ 0.39
USB1-206ENST00000562534 UBE2ZQ9H832 354 aaPredicted RBP17.47■□□□□ 0.39
USB1-206ENST00000562534 MAN1C1Q9NR34 630 aa17.47■□□□□ 0.39
USB1-206ENST00000562534 GCNT4Q9P109 453 aa17.47■□□□□ 0.39
USB1-206ENST00000562534 CLEC1BQ9P126 229 aa17.47■□□□□ 0.39
USB1-206ENST00000562534 GTF3C4Q9UKN8 822 aa17.47■□□□□ 0.39
USB1-206ENST00000562534 OR4Q2P0C623 313 aa17.46■□□□□ 0.39
USB1-206ENST00000562534 PTPN1P18031 435 aaKnown RBP17.46■□□□□ 0.39
USB1-206ENST00000562534 SLC9A1P19634 815 aa17.46■□□□□ 0.39
USB1-206ENST00000562534 ACAT1P24752 427 aaKnown RBP17.46■□□□□ 0.39
USB1-206ENST00000562534 PON1P27169 355 aa17.46■□□□□ 0.39
USB1-206ENST00000562534 RAP1GAPP47736 663 aa17.46■□□□□ 0.39
USB1-206ENST00000562534 TUFMP49411 452 aaKnown RBP17.46■□□□□ 0.39
USB1-206ENST00000562534 RBM10P98175 930 aaKnown RBP17.46■□□□□ 0.39
USB1-206ENST00000562534 GCNT1Q02742 428 aa17.46■□□□□ 0.39
USB1-206ENST00000562534 INCA1Q0VD86 236 aa17.46■□□□□ 0.39
USB1-206ENST00000562534 FILIP1LQ4L180 1135 aa17.46■□□□□ 0.39
USB1-206ENST00000562534 LIN9Q5TKA1 542 aa17.46■□□□□ 0.39
USB1-206ENST00000562534 SMYD5Q6GMV2 418 aa17.46■□□□□ 0.39
USB1-206ENST00000562534 TRIM65Q6PJ69 517 aa17.46■□□□□ 0.39
USB1-206ENST00000562534 CYP26C1Q6V0L0 522 aa17.46■□□□□ 0.39
USB1-206ENST00000562534 ENOSF1Q7L5Y1 443 aa17.46■□□□□ 0.39
USB1-206ENST00000562534 PPM1KQ8N3J5 372 aa17.46■□□□□ 0.39
USB1-206ENST00000562534 SPPL2BQ8TCT7 592 aa17.46■□□□□ 0.39
USB1-206ENST00000562534 SYT15Q9BQS2 421 aa17.46■□□□□ 0.39
USB1-206ENST00000562534 CYP4F11Q9HBI6 524 aa17.46■□□□□ 0.39
USB1-206ENST00000562534 CISHQ9NSE2 258 aa17.46■□□□□ 0.39
USB1-206ENST00000562534 ZDHHC7Q9NXF8 308 aa17.46■□□□□ 0.39
USB1-206ENST00000562534 FBXW11Q9UKB1 542 aa17.46■□□□□ 0.39
USB1-206ENST00000562534 PCDHB5Q9Y5E4 795 aa17.46■□□□□ 0.39
USB1-206ENST00000562534 PRRG1O14668 218 aa17.45■□□□□ 0.38
USB1-206ENST00000562534 ZMYND10O75800 440 aa17.45■□□□□ 0.38
USB1-206ENST00000562534 HNRNPA1P09651 372 aaKnown RBP eCLIP17.45■□□□□ 0.38
USB1-206ENST00000562534 ATP1A3P13637 1013 aa17.45■□□□□ 0.38
USB1-206ENST00000562534 NDST1P52848 882 aa17.45■□□□□ 0.38
USB1-206ENST00000562534 MFAP3P55082 362 aa17.45■□□□□ 0.38
USB1-206ENST00000562534 ITIH3Q06033 890 aa17.45■□□□□ 0.38
USB1-206ENST00000562534 DLX2Q07687 328 aaPredicted RBP17.45■□□□□ 0.38
USB1-206ENST00000562534 AAK1Q2M2I8 961 aa17.45■□□□□ 0.38
USB1-206ENST00000562534 PPM1LQ5SGD2 360 aa17.45■□□□□ 0.38
USB1-206ENST00000562534 PHLDB3Q6NSJ2 640 aa17.45■□□□□ 0.38
USB1-206ENST00000562534 C4orf50Q6ZRC1 276 aa17.45■□□□□ 0.38
USB1-206ENST00000562534 MYCBPAPQ8TBZ2 947 aa17.45■□□□□ 0.38
USB1-206ENST00000562534 MSLNLQ96KJ4 702 aa17.45■□□□□ 0.38
USB1-206ENST00000562534 NT5C1AQ9BXI3 368 aa17.45■□□□□ 0.38
USB1-206ENST00000562534 SFXN1Q9H9B4 322 aa17.45■□□□□ 0.38
USB1-206ENST00000562534 UBE2TQ9NPD8 197 aaPredicted RBP17.45■□□□□ 0.38
USB1-206ENST00000562534 CCDC195A0A1B0GUA6 201 aa17.44■□□□□ 0.38
USB1-206ENST00000562534 MYBPHLA2RUH7 354 aa17.44■□□□□ 0.38
USB1-206ENST00000562534 MTMR11A4FU01 709 aa17.44■□□□□ 0.38
USB1-206ENST00000562534 ATP2C2O75185 946 aa17.44■□□□□ 0.38
USB1-206ENST00000562534 CILPO75339 1184 aa17.44■□□□□ 0.38
USB1-206ENST00000562534 SERPINC1P01008 464 aa17.44■□□□□ 0.38
USB1-206ENST00000562534 C8AP07357 584 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms