RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 EME2A4GXA9 379 aaPredicted RBP14.71□□□□□ -0.06
VPS9D1-202ENST00000561976 PLA2G6O60733 806 aa14.71□□□□□ -0.06
VPS9D1-202ENST00000561976 HNRNPCL1O60812 293 aaKnown RBP14.71□□□□□ -0.06
VPS9D1-202ENST00000561976 CCDC22O60826 627 aa14.71□□□□□ -0.06
VPS9D1-202ENST00000561976 HAUS5O94927 633 aa14.71□□□□□ -0.06
VPS9D1-202ENST00000561976 ACOT2P49753 483 aa14.71□□□□□ -0.06
VPS9D1-202ENST00000561976 GPX6P59796 221 aa14.71□□□□□ -0.06
VPS9D1-202ENST00000561976 KLC1Q07866 573 aa14.71□□□□□ -0.06
VPS9D1-202ENST00000561976 ZACNQ401N2 412 aa14.71□□□□□ -0.06
VPS9D1-202ENST00000561976 DRICH1Q6PGQ1 229 aaPredicted RBP14.71□□□□□ -0.06
VPS9D1-202ENST00000561976 DCUN1D2Q6PH85 259 aa14.71□□□□□ -0.06
VPS9D1-202ENST00000561976 C4orf50Q6ZRC1 276 aa14.71□□□□□ -0.06
VPS9D1-202ENST00000561976 C15orf39Q6ZRI6 1047 aa14.71□□□□□ -0.06
VPS9D1-202ENST00000561976 SPIRE2Q8WWL2 714 aa14.71□□□□□ -0.06
VPS9D1-202ENST00000561976 CLEC4DQ8WXI8 215 aa14.71□□□□□ -0.06
VPS9D1-202ENST00000561976 MIPEPQ99797 713 aa14.71□□□□□ -0.06
VPS9D1-202ENST00000561976 TRIM55Q9BYV6 548 aa14.71□□□□□ -0.06
VPS9D1-202ENST00000561976 HEY2Q9UBP5 337 aa14.71□□□□□ -0.06
VPS9D1-202ENST00000561976 DRG1Q9Y295 367 aaKnown RBP14.71□□□□□ -0.06
VPS9D1-202ENST00000561976 F8VP50 259 aa14.7□□□□□ -0.06
VPS9D1-202ENST00000561976 NVLO15381 856 aaKnown RBP14.7□□□□□ -0.06
VPS9D1-202ENST00000561976 ACADSP16219 412 aa14.7□□□□□ -0.06
VPS9D1-202ENST00000561976 ACO1P21399 889 aaKnown RBP14.7□□□□□ -0.06
VPS9D1-202ENST00000561976 SFNP31947 248 aa14.7□□□□□ -0.06
VPS9D1-202ENST00000561976 DYNLT1P63172 113 aa14.7□□□□□ -0.06
VPS9D1-202ENST00000561976 C1QBPQ07021 282 aaKnown RBP14.7□□□□□ -0.06
VPS9D1-202ENST00000561976 EFHC2Q5JST6 749 aa14.7□□□□□ -0.06
VPS9D1-202ENST00000561976 SPDYAQ5MJ70 313 aa14.7□□□□□ -0.06
VPS9D1-202ENST00000561976 TMEM154Q6P9G4 183 aa14.7□□□□□ -0.06
VPS9D1-202ENST00000561976 C3orf62Q6ZUJ4 267 aa14.7□□□□□ -0.06
VPS9D1-202ENST00000561976 SPDYE1Q8NFV5 336 aaPredicted RBP14.7□□□□□ -0.06
VPS9D1-202ENST00000561976 ZNF398Q8TD17 642 aa14.7□□□□□ -0.06
VPS9D1-202ENST00000561976 SYTL5Q8TDW5 730 aaPredicted RBP14.7□□□□□ -0.06
VPS9D1-202ENST00000561976 SH3TC2Q8TF17 1288 aa14.7□□□□□ -0.06
VPS9D1-202ENST00000561976 MCUR1Q96AQ8 359 aa14.7□□□□□ -0.06
VPS9D1-202ENST00000561976 MCEEQ96PE7 176 aa14.7□□□□□ -0.06
VPS9D1-202ENST00000561976 CADM1Q9BY67 442 aaKnown RBP14.7□□□□□ -0.06
VPS9D1-202ENST00000561976 RABGEF1Q9UJ41 708 aa14.7□□□□□ -0.06
VPS9D1-202ENST00000561976 RPL26L1Q9UNX3 145 aaKnown RBP14.7□□□□□ -0.06
VPS9D1-202ENST00000561976 NUMBLQ9Y6R0 609 aa14.7□□□□□ -0.06
VPS9D1-202ENST00000561976 GYG2O15488 501 aa14.7□□□□□ -0.06
VPS9D1-202ENST00000561976 EXTL3O43909 919 aa14.7□□□□□ -0.06
VPS9D1-202ENST00000561976 SMIM24O75264 130 aa14.7□□□□□ -0.06
VPS9D1-202ENST00000561976 GLRA2P23416 452 aa14.7□□□□□ -0.06
VPS9D1-202ENST00000561976 KRT76Q01546 638 aa14.7□□□□□ -0.06
VPS9D1-202ENST00000561976 WDR72Q3MJ13 1102 aa14.7□□□□□ -0.06
VPS9D1-202ENST00000561976 DSTYKQ6XUX3 929 aa14.7□□□□□ -0.06
VPS9D1-202ENST00000561976 RHPN2Q8IUC4 686 aa14.7□□□□□ -0.06
VPS9D1-202ENST00000561976 VPS52Q8N1B4 723 aa14.7□□□□□ -0.06
VPS9D1-202ENST00000561976 ATP11CQ8NB49 1132 aa14.7□□□□□ -0.06
VPS9D1-202ENST00000561976 PAFAH2Q99487 392 aa14.7□□□□□ -0.06
VPS9D1-202ENST00000561976 NTPCRQ9BSD7 190 aaKnown RBP14.7□□□□□ -0.06
VPS9D1-202ENST00000561976 DEFB129Q9H1M3 183 aa14.7□□□□□ -0.06
VPS9D1-202ENST00000561976 TLE6Q9H808 572 aa14.7□□□□□ -0.06
VPS9D1-202ENST00000561976 MANSC1Q9H8J5 431 aa14.7□□□□□ -0.06
VPS9D1-202ENST00000561976 PCDH9Q9HC56 1237 aa14.7□□□□□ -0.06
VPS9D1-202ENST00000561976 RAVER2Q9HCJ3 691 aaKnown RBP14.7□□□□□ -0.06
VPS9D1-202ENST00000561976 SLC17A7Q9P2U7 560 aa14.7□□□□□ -0.06
VPS9D1-202ENST00000561976 SCN9AQ15858 1988 aa14.69□□□□□ -0.06
VPS9D1-202ENST00000561976 C4BPAP04003 597 aaKnown RBP14.69□□□□□ -0.06
VPS9D1-202ENST00000561976 ARL4CP56559 192 aa14.69□□□□□ -0.06
VPS9D1-202ENST00000561976 WNT7BP56706 349 aa14.69□□□□□ -0.06
VPS9D1-202ENST00000561976 GAD2Q05329 585 aa14.69□□□□□ -0.06
VPS9D1-202ENST00000561976 MCL1Q07820 350 aa14.69□□□□□ -0.06
VPS9D1-202ENST00000561976 RCN1Q15293 331 aa14.69□□□□□ -0.06
VPS9D1-202ENST00000561976 CTC1Q2NKJ3 1217 aa14.69□□□□□ -0.06
VPS9D1-202ENST00000561976 TFDP3Q5H9I0 405 aa14.69□□□□□ -0.06
VPS9D1-202ENST00000561976 TXNRD3NBQ6F5E7 133 aa14.69□□□□□ -0.06
VPS9D1-202ENST00000561976 PALM2Q8IXS6 379 aa14.69□□□□□ -0.06
VPS9D1-202ENST00000561976 SAMD3Q8N6K7 520 aa14.69□□□□□ -0.06
VPS9D1-202ENST00000561976 ZBTB10Q96DT7 871 aa14.69□□□□□ -0.06
VPS9D1-202ENST00000561976 BTBD10Q9BSF8 475 aa14.69□□□□□ -0.06
VPS9D1-202ENST00000561976 C10orf88Q9H8K7 445 aa14.69□□□□□ -0.06
VPS9D1-202ENST00000561976 APOBEC3GQ9HC16 384 aaKnown RBP14.69□□□□□ -0.06
VPS9D1-202ENST00000561976 ARL8BQ9NVJ2 186 aa14.69□□□□□ -0.06
VPS9D1-202ENST00000561976 NMRK1Q9NWW6 199 aa14.69□□□□□ -0.06
VPS9D1-202ENST00000561976 GABBR1Q9UBS5 961 aa14.69□□□□□ -0.06
VPS9D1-202ENST00000561976 NDC80O14777 642 aa14.69□□□□□ -0.06
VPS9D1-202ENST00000561976 VHLP40337 213 aa14.69□□□□□ -0.06
VPS9D1-202ENST00000561976 PTGER2P43116 358 aa14.69□□□□□ -0.06
VPS9D1-202ENST00000561976 ARFIP2P53365 341 aa14.69□□□□□ -0.06
VPS9D1-202ENST00000561976 NLRP11P59045 1033 aaKnown RBP14.69□□□□□ -0.06
VPS9D1-202ENST00000561976 SP4Q02446 784 aa14.69□□□□□ -0.06
VPS9D1-202ENST00000561976 PSMD6Q15008 389 aa14.69□□□□□ -0.06
VPS9D1-202ENST00000561976 PGM5Q15124 567 aa14.69□□□□□ -0.06
VPS9D1-202ENST00000561976 RASA2Q15283 850 aa14.69□□□□□ -0.06
VPS9D1-202ENST00000561976 OASLQ15646 514 aaKnown RBP14.69□□□□□ -0.06
VPS9D1-202ENST00000561976 GNPTABQ3T906 1256 aa14.69□□□□□ -0.06
VPS9D1-202ENST00000561976 THEMIS2Q5TEJ8 643 aa14.69□□□□□ -0.06
VPS9D1-202ENST00000561976 LRRC6Q86X45 466 aa14.69□□□□□ -0.06
VPS9D1-202ENST00000561976 SCYL3Q8IZE3 742 aa14.69□□□□□ -0.06
VPS9D1-202ENST00000561976 TSC22D3Q99576 134 aa14.69□□□□□ -0.06
VPS9D1-202ENST00000561976 TSSK1BQ9BXA7 367 aa14.69□□□□□ -0.06
VPS9D1-202ENST00000561976 C17orf75Q9HAS0 396 aa14.69□□□□□ -0.06
VPS9D1-202ENST00000561976 SSU72Q9NP77 194 aaKnown RBP14.69□□□□□ -0.06
VPS9D1-202ENST00000561976 SAE1Q9UBE0 346 aaPredicted RBP14.69□□□□□ -0.06
VPS9D1-202ENST00000561976 AGTPBP1Q9UPW5 1226 aa14.69□□□□□ -0.06
VPS9D1-202ENST00000561976 ANKRD31Q8N7Z5 1873 aa14.69□□□□□ -0.06
VPS9D1-202ENST00000561976 CLUHO75153 1309 aa14.69□□□□□ -0.06
VPS9D1-202ENST00000561976 hCG_1818297A0A087WSY0 165 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms