RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 TBCKQ8TEA7 893 aa19.57■□□□□ 0.72
RAB40C-206ENST00000561781 POP1Q99575 1024 aaKnown RBP19.57■□□□□ 0.72
RAB40C-206ENST00000561781 SCHIP1Q9P0W5 487 aaPredicted RBP19.57■□□□□ 0.72
RAB40C-206ENST00000561781 UVRAGQ9P2Y5 699 aa19.57■□□□□ 0.72
RAB40C-206ENST00000561781 MAD2L2Q9UI95 211 aa19.57■□□□□ 0.72
RAB40C-206ENST00000561781 PPM1HQ9ULR3 514 aa19.57■□□□□ 0.72
RAB40C-206ENST00000561781 COG5Q9UP83 839 aa19.57■□□□□ 0.72
RAB40C-206ENST00000561781 TRIM17Q9Y577 477 aa19.57■□□□□ 0.72
RAB40C-206ENST00000561781 AK5Q9Y6K8 562 aa19.57■□□□□ 0.72
RAB40C-206ENST00000561781 TCRBV7S2A1N4TA0A589 114 aa19.57■□□□□ 0.72
RAB40C-206ENST00000561781 COILP38432 576 aaPredicted RBP19.57■□□□□ 0.72
RAB40C-206ENST00000561781 DLG1Q12959 904 aa19.57■□□□□ 0.72
RAB40C-206ENST00000561781 ZNF423Q2M1K9 1284 aa19.57■□□□□ 0.72
RAB40C-206ENST00000561781 SFT2D3Q587I9 215 aa19.57■□□□□ 0.72
RAB40C-206ENST00000561781 PLEKHG4Q58EX7 1191 aa19.57■□□□□ 0.72
RAB40C-206ENST00000561781 DEPDC1Q5TB30 811 aa19.57■□□□□ 0.72
RAB40C-206ENST00000561781 RSBN1LQ6PCB5 846 aaPredicted RBP19.57■□□□□ 0.72
RAB40C-206ENST00000561781 ERI1Q8IV48 349 aaKnown RBP19.57■□□□□ 0.72
RAB40C-206ENST00000561781 PNMA1Q8ND90 353 aa19.57■□□□□ 0.72
RAB40C-206ENST00000561781 DDI1Q8WTU0 396 aa19.57■□□□□ 0.72
RAB40C-206ENST00000561781 SCFD1Q8WVM8 642 aa19.57■□□□□ 0.72
RAB40C-206ENST00000561781 SREK1Q8WXA9 508 aaKnown RBP19.57■□□□□ 0.72
RAB40C-206ENST00000561781 PANX3Q96QZ0 392 aa19.57■□□□□ 0.72
RAB40C-206ENST00000561781 VPS33BQ9H267 617 aa19.57■□□□□ 0.72
RAB40C-206ENST00000561781 SIX2Q9NPC8 291 aa19.57■□□□□ 0.72
RAB40C-206ENST00000561781 SELENONQ9NZV5 590 aa19.57■□□□□ 0.72
RAB40C-206ENST00000561781 SPO11Q9Y5K1 396 aa19.57■□□□□ 0.72
RAB40C-206ENST00000561781 USP1O94782 785 aa19.56■□□□□ 0.72
RAB40C-206ENST00000561781 NR2F2P24468 414 aa19.56■□□□□ 0.72
RAB40C-206ENST00000561781 ZBTB16Q05516 673 aa19.56■□□□□ 0.72
RAB40C-206ENST00000561781 CALCRLQ16602 461 aa19.56■□□□□ 0.72
RAB40C-206ENST00000561781 MYLK3Q32MK0 819 aa19.56■□□□□ 0.72
RAB40C-206ENST00000561781 DHRS4L2Q6PKH6 230 aa19.56■□□□□ 0.72
RAB40C-206ENST00000561781 METTL25Q8N6Q8 603 aa19.56■□□□□ 0.72
RAB40C-206ENST00000561781 MTMR9Q96QG7 549 aa19.56■□□□□ 0.72
RAB40C-206ENST00000561781 MTMR7Q9Y216 660 aa19.56■□□□□ 0.72
RAB40C-206ENST00000561781 GOLGA8TH3BQL2 631 aa19.56■□□□□ 0.72
RAB40C-206ENST00000561781 SPTLC1O15269 473 aa19.56■□□□□ 0.72
RAB40C-206ENST00000561781 OXSR1O95747 527 aaPredicted RBP19.56■□□□□ 0.72
RAB40C-206ENST00000561781 GOLGA8HP0CJ92 632 aa19.56■□□□□ 0.72
RAB40C-206ENST00000561781 FXR2P51116 673 aaKnown RBP eCLIP19.56■□□□□ 0.72
RAB40C-206ENST00000561781 MSLNQ13421 630 aaPredicted RBP19.56■□□□□ 0.72
RAB40C-206ENST00000561781 ECM1Q16610 540 aa19.56■□□□□ 0.72
RAB40C-206ENST00000561781 CYP1B1Q16678 543 aa19.56■□□□□ 0.72
RAB40C-206ENST00000561781 ZC3H3Q8IXZ2 948 aaKnown RBP19.56■□□□□ 0.72
RAB40C-206ENST00000561781 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.56■□□□□ 0.72
RAB40C-206ENST00000561781 ZNF75CPQ92670 426 aaPredicted RBP19.56■□□□□ 0.72
RAB40C-206ENST00000561781 PPP1R10Q96QC0 940 aaKnown RBP19.56■□□□□ 0.72
RAB40C-206ENST00000561781 SENP6Q9GZR1 1112 aaPredicted RBP19.56■□□□□ 0.72
RAB40C-206ENST00000561781 THAP2Q9H0W7 228 aa19.56■□□□□ 0.72
RAB40C-206ENST00000561781 MTUS1Q9ULD2 1270 aa19.56■□□□□ 0.72
RAB40C-206ENST00000561781 CTDP1Q9Y5B0 961 aaPredicted RBP19.56■□□□□ 0.72
RAB40C-206ENST00000561781 PCDHA2Q9Y5H9 948 aa19.56■□□□□ 0.72
RAB40C-206ENST00000561781 ALG6Q9Y672 507 aa19.56■□□□□ 0.72
RAB40C-206ENST00000561781 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.55■□□□□ 0.72
RAB40C-206ENST00000561781 SPECC1L-ADORA2AF8WAN1 911 aa19.55■□□□□ 0.72
RAB40C-206ENST00000561781 TM7SF2O76062 418 aa19.55■□□□□ 0.72
RAB40C-206ENST00000561781 ITIH2P19823 946 aa19.55■□□□□ 0.72
RAB40C-206ENST00000561781 TRPC1P48995 793 aa19.55■□□□□ 0.72
RAB40C-206ENST00000561781 NAPAP54920 295 aa19.55■□□□□ 0.72
RAB40C-206ENST00000561781 EPHA7Q15375 998 aa19.55■□□□□ 0.72
RAB40C-206ENST00000561781 DCAF17Q5H9S7 520 aaPredicted RBP19.55■□□□□ 0.72
RAB40C-206ENST00000561781 PCNX4Q63HM2 1172 aa19.55■□□□□ 0.72
RAB40C-206ENST00000561781 RSPH3Q86UC2 560 aa19.55■□□□□ 0.72
RAB40C-206ENST00000561781 TRABD2AQ86V40 505 aa19.55■□□□□ 0.72
RAB40C-206ENST00000561781 KSR1Q8IVT5 923 aa19.55■□□□□ 0.72
RAB40C-206ENST00000561781 ALLCQ8N6M5 410 aa19.55■□□□□ 0.72
RAB40C-206ENST00000561781 RIN3Q8TB24 985 aa19.55■□□□□ 0.72
RAB40C-206ENST00000561781 MAML1Q92585 1016 aa19.55■□□□□ 0.72
RAB40C-206ENST00000561781 SKA1Q96BD8 255 aa19.55■□□□□ 0.72
RAB40C-206ENST00000561781 BIRC8Q96P09 236 aa19.55■□□□□ 0.72
RAB40C-206ENST00000561781 SENP1Q9P0U3 644 aa19.55■□□□□ 0.72
RAB40C-206ENST00000561781 DCTN4Q9UJW0 460 aa19.55■□□□□ 0.72
RAB40C-206ENST00000561781 MTO1Q9Y2Z2 717 aaKnown RBP19.55■□□□□ 0.72
RAB40C-206ENST00000561781 MIF4GDA9UHW6 222 aaKnown RBP19.55■□□□□ 0.72
RAB40C-206ENST00000561781 ADAM23O75077 832 aa19.55■□□□□ 0.72
RAB40C-206ENST00000561781 AQP4P55087 323 aa19.55■□□□□ 0.72
RAB40C-206ENST00000561781 CACNB1Q02641 598 aaPredicted RBP19.55■□□□□ 0.72
RAB40C-206ENST00000561781 TMED2Q15363 201 aa19.55■□□□□ 0.72
RAB40C-206ENST00000561781 TMEM119Q4V9L6 283 aa19.55■□□□□ 0.72
RAB40C-206ENST00000561781 RHBDF2Q6PJF5 856 aa19.55■□□□□ 0.72
RAB40C-206ENST00000561781 SAMD7Q7Z3H4 446 aa19.55■□□□□ 0.72
RAB40C-206ENST00000561781 UBL4BQ8N7F7 174 aa19.55■□□□□ 0.72
RAB40C-206ENST00000561781 PYROXD1Q8WU10 500 aa19.55■□□□□ 0.72
RAB40C-206ENST00000561781 TRIM55Q9BYV6 548 aa19.55■□□□□ 0.72
RAB40C-206ENST00000561781 TYW1Q9NV66 732 aaKnown RBP19.55■□□□□ 0.72
RAB40C-206ENST00000561781 KANSL3Q9P2N6 904 aa19.55■□□□□ 0.72
RAB40C-206ENST00000561781 GRID1Q9ULK0 1009 aa19.55■□□□□ 0.72
RAB40C-206ENST00000561781 LZTS1Q9Y250 596 aa19.55■□□□□ 0.72
RAB40C-206ENST00000561781 FUOMA2VDF0 154 aa19.54■□□□□ 0.72
RAB40C-206ENST00000561781 CAMK2BQ13554 666 aa19.54■□□□□ 0.72
RAB40C-206ENST00000561781 KRT81Q14533 505 aa19.54■□□□□ 0.72
RAB40C-206ENST00000561781 GRM4Q14833 912 aa19.54■□□□□ 0.72
RAB40C-206ENST00000561781 C1orf146Q5VVC0 180 aa19.54■□□□□ 0.72
RAB40C-206ENST00000561781 KRT79Q5XKE5 535 aa19.54■□□□□ 0.72
RAB40C-206ENST00000561781 FAM91A1Q658Y4 838 aa19.54■□□□□ 0.72
RAB40C-206ENST00000561781 MICALL2Q8IY33 904 aa19.54■□□□□ 0.72
RAB40C-206ENST00000561781 MARVELD2Q8N4S9 558 aa19.54■□□□□ 0.72
RAB40C-206ENST00000561781 BHMTQ93088 406 aa19.54■□□□□ 0.72
RAB40C-206ENST00000561781 GRIP2Q9C0E4 1043 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms