RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 SLITRK6Q9H5Y7 841 aa11.08□□□□□ -0.64
CLK3-205ENST00000561673 MAGEF1Q9HAY2 307 aa11.08□□□□□ -0.64
CLK3-205ENST00000561673 ZNF334Q9HCZ1 680 aaPredicted RBP11.08□□□□□ -0.64
CLK3-205ENST00000561673 HEBP1Q9NRV9 189 aa11.08□□□□□ -0.64
CLK3-205ENST00000561673 TMLHEQ9NVH6 421 aa11.08□□□□□ -0.64
CLK3-205ENST00000561673 FAM13BQ9NYF5 915 aa11.08□□□□□ -0.64
CLK3-205ENST00000561673 HSPBP1Q9NZL4 362 aa11.08□□□□□ -0.64
CLK3-205ENST00000561673 L1RE1Q9UN81 338 aa11.08□□□□□ -0.64
CLK3-205ENST00000561673 SHISA7A6NL88 538 aa11.07□□□□□ -0.64
CLK3-205ENST00000561673 HUS1O60921 280 aa11.07□□□□□ -0.64
CLK3-205ENST00000561673 KRT19P08727 400 aa11.07□□□□□ -0.64
CLK3-205ENST00000561673 HAPLN1P10915 354 aaPredicted RBP11.07□□□□□ -0.64
CLK3-205ENST00000561673 PSMC3P17980 439 aa11.07□□□□□ -0.64
CLK3-205ENST00000561673 ATF6P18850 670 aa11.07□□□□□ -0.64
CLK3-205ENST00000561673 AFMP43652 599 aa11.07□□□□□ -0.64
CLK3-205ENST00000561673 SMARCB1Q12824 385 aa11.07□□□□□ -0.64
CLK3-205ENST00000561673 CUL4BQ13620 913 aa11.07□□□□□ -0.64
CLK3-205ENST00000561673 UBXN2BQ14CS0 331 aa11.07□□□□□ -0.64
CLK3-205ENST00000561673 ZNF852Q6ZMS4 543 aa11.07□□□□□ -0.64
CLK3-205ENST00000561673 TPRG1Q6ZUI0 275 aa11.07□□□□□ -0.64
CLK3-205ENST00000561673 ASCL5Q7RTU5 278 aa11.07□□□□□ -0.64
CLK3-205ENST00000561673 ITIH5Q86UX2 942 aa11.07□□□□□ -0.64
CLK3-205ENST00000561673 GPIHBP1Q8IV16 184 aa11.07□□□□□ -0.64
CLK3-205ENST00000561673 C1orf210Q8IVY1 113 aa11.07□□□□□ -0.64
CLK3-205ENST00000561673 MFSD6LQ8IWD5 586 aa11.07□□□□□ -0.64
CLK3-205ENST00000561673 NELFCDQ8IXH7 590 aa11.07□□□□□ -0.64
CLK3-205ENST00000561673 GRAMD1CQ8IYS0 662 aa11.07□□□□□ -0.64
CLK3-205ENST00000561673 DCP1BQ8IZD4 617 aaKnown RBP11.07□□□□□ -0.64
CLK3-205ENST00000561673 RDH13Q8NBN7 331 aa11.07□□□□□ -0.64
CLK3-205ENST00000561673 OR5B17Q8NGF7 314 aa11.07□□□□□ -0.64
CLK3-205ENST00000561673 FAM200AQ8TCP9 573 aa11.07□□□□□ -0.64
CLK3-205ENST00000561673 GIPC2Q8TF65 315 aa11.07□□□□□ -0.64
CLK3-205ENST00000561673 C2orf15Q8WU43 125 aaKnown RBP11.07□□□□□ -0.64
CLK3-205ENST00000561673 RSPRY1Q96DX4 576 aa11.07□□□□□ -0.64
CLK3-205ENST00000561673 ANKRD36BP1Q96IX9 119 aa11.07□□□□□ -0.64
CLK3-205ENST00000561673 MKNK1Q9BUB5 465 aa11.07□□□□□ -0.64
CLK3-205ENST00000561673 OSBPL6Q9BZF3 934 aa11.07□□□□□ -0.64
CLK3-205ENST00000561673 ATXN3LQ9H3M9 355 aa11.07□□□□□ -0.64
CLK3-205ENST00000561673 BRD9Q9H8M2 597 aa11.07□□□□□ -0.64
CLK3-205ENST00000561673 LTB4R2Q9NPC1 389 aa11.07□□□□□ -0.64
CLK3-205ENST00000561673 AGPAT3Q9NRZ7 376 aa11.07□□□□□ -0.64
CLK3-205ENST00000561673 INTS13Q9NVM9 706 aa11.07□□□□□ -0.64
CLK3-205ENST00000561673 GDAP2Q9NXN4 497 aa11.07□□□□□ -0.64
CLK3-205ENST00000561673 ABI2Q9NYB9 513 aaPredicted RBP11.07□□□□□ -0.64
CLK3-205ENST00000561673 SNX9Q9Y5X1 595 aa11.07□□□□□ -0.64
CLK3-205ENST00000561673 COL4A3Q01955 1670 aa11.07□□□□□ -0.64
CLK3-205ENST00000561673 NCANO14594 1321 aa11.07□□□□□ -0.64
CLK3-205ENST00000561673 PTPRJQ12913 1337 aa11.07□□□□□ -0.64
CLK3-205ENST00000561673 ANK1P16157 1881 aa11.06□□□□□ -0.64
CLK3-205ENST00000561673 SCN1AP35498 2009 aa11.06□□□□□ -0.64
CLK3-205ENST00000561673 MYH15Q9Y2K3 1946 aa11.06□□□□□ -0.64
CLK3-205ENST00000561673 PVALEFA0A1B0GWK0 134 aa11.06□□□□□ -0.64
CLK3-205ENST00000561673 HEPACAM2A8MVW5 462 aa11.06□□□□□ -0.64
CLK3-205ENST00000561673 CLIC2O15247 247 aa11.06□□□□□ -0.64
CLK3-205ENST00000561673 FGF19O95750 216 aa11.06□□□□□ -0.64
CLK3-205ENST00000561673 TMEM191BP0C7N4 346 aa11.06□□□□□ -0.64
CLK3-205ENST00000561673 SLFN14P0C7P3 912 aa11.06□□□□□ -0.64
CLK3-205ENST00000561673 ACAT1P24752 427 aaKnown RBP11.06□□□□□ -0.64
CLK3-205ENST00000561673 GABRR2P28476 465 aa11.06□□□□□ -0.64
CLK3-205ENST00000561673 GDI1P31150 447 aa11.06□□□□□ -0.64
CLK3-205ENST00000561673 TSPY1Q01534 308 aa11.06□□□□□ -0.64
CLK3-205ENST00000561673 BFSP1Q12934 665 aa11.06□□□□□ -0.64
CLK3-205ENST00000561673 SNRNP35Q16560 246 aaKnown RBP11.06□□□□□ -0.64
CLK3-205ENST00000561673 DUOXA2Q1HG44 320 aa11.06□□□□□ -0.64
CLK3-205ENST00000561673 SOWAHAQ2M3V2 549 aa11.06□□□□□ -0.64
CLK3-205ENST00000561673 ARID3BQ8IVW6 561 aaPredicted RBP11.06□□□□□ -0.64
CLK3-205ENST00000561673 MAML2Q8IZL2 1156 aaPredicted RBP11.06□□□□□ -0.64
CLK3-205ENST00000561673 TMEM86AQ8N2M4 240 aa11.06□□□□□ -0.64
CLK3-205ENST00000561673 SPPL2BQ8TCT7 592 aa11.06□□□□□ -0.64
CLK3-205ENST00000561673 DNASE1L2Q92874 299 aa11.06□□□□□ -0.64
CLK3-205ENST00000561673 IRF7Q92985 503 aa11.06□□□□□ -0.64
CLK3-205ENST00000561673 HPDLQ96IR7 371 aa11.06□□□□□ -0.64
CLK3-205ENST00000561673 CHAMP1Q96JM3 812 aa11.06□□□□□ -0.64
CLK3-205ENST00000561673 LRRC3BQ96PB8 259 aa11.06□□□□□ -0.64
CLK3-205ENST00000561673 ACBD6Q9BR61 282 aa11.06□□□□□ -0.64
CLK3-205ENST00000561673 PI4K2AQ9BTU6 479 aa11.06□□□□□ -0.64
CLK3-205ENST00000561673 BCO2Q9BYV7 579 aa11.06□□□□□ -0.64
CLK3-205ENST00000561673 KIAA1586Q9HCI6 787 aa11.06□□□□□ -0.64
CLK3-205ENST00000561673 SLC39A2Q9NP94 309 aa11.06□□□□□ -0.64
CLK3-205ENST00000561673 TRPV5Q9NQA5 729 aa11.06□□□□□ -0.64
CLK3-205ENST00000561673 DDX43Q9NXZ2 648 aaKnown RBP11.06□□□□□ -0.64
CLK3-205ENST00000561673 SERTAD1Q9UHV2 236 aa11.06□□□□□ -0.64
CLK3-205ENST00000561673 ZDHHC9Q9Y397 364 aa11.06□□□□□ -0.64
CLK3-205ENST00000561673 PCDHB5Q9Y5E4 795 aa11.06□□□□□ -0.64
CLK3-205ENST00000561673 PRR23AA6NEV1 266 aa11.05□□□□□ -0.64
CLK3-205ENST00000561673 ARNTLO00327 626 aa11.05□□□□□ -0.64
CLK3-205ENST00000561673 GABRDO14764 452 aa11.05□□□□□ -0.64
CLK3-205ENST00000561673 ZNF263O14978 683 aa11.05□□□□□ -0.64
CLK3-205ENST00000561673 HCRTO43612 131 aa11.05□□□□□ -0.64
CLK3-205ENST00000561673 ACTN4O43707 911 aaKnown RBP11.05□□□□□ -0.64
CLK3-205ENST00000561673 TNNC2P02585 160 aa11.05□□□□□ -0.64
CLK3-205ENST00000561673 TARSP26639 723 aaKnown RBP11.05□□□□□ -0.64
CLK3-205ENST00000561673 LHX1P48742 406 aa11.05□□□□□ -0.64
CLK3-205ENST00000561673 GPR15P49685 360 aa11.05□□□□□ -0.64
CLK3-205ENST00000561673 CYP2J2P51589 502 aa11.05□□□□□ -0.64
CLK3-205ENST00000561673 SNRPFP62306 86 aaKnown RBP11.05□□□□□ -0.64
CLK3-205ENST00000561673 MYL7Q01449 175 aa11.05□□□□□ -0.64
CLK3-205ENST00000561673 MYO1EQ12965 1108 aa11.05□□□□□ -0.64
CLK3-205ENST00000561673 FZD5Q13467 585 aa11.05□□□□□ -0.64
CLK3-205ENST00000561673 VEPH1Q14D04 833 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms