RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 M0QZ92 97 aa8.04□□□□□ -1.12
TPM1-231ENST00000561395 CYP26A1O43174 497 aa8.04□□□□□ -1.12
TPM1-231ENST00000561395 MBTPS2O43462 519 aa8.04□□□□□ -1.12
TPM1-231ENST00000561395 CST3P01034 146 aaPredicted RBP8.04□□□□□ -1.12
TPM1-231ENST00000561395 CHRNB2P17787 502 aa8.04□□□□□ -1.12
TPM1-231ENST00000561395 ACO1P21399 889 aaKnown RBP8.04□□□□□ -1.12
TPM1-231ENST00000561395 LTBRP36941 435 aa8.04□□□□□ -1.12
TPM1-231ENST00000561395 ID4P47928 161 aa8.04□□□□□ -1.12
TPM1-231ENST00000561395 PDE6CP51160 858 aa8.04□□□□□ -1.12
TPM1-231ENST00000561395 VCPP55072 806 aaKnown RBP8.04□□□□□ -1.12
TPM1-231ENST00000561395 MYL6P60660 151 aa8.04□□□□□ -1.12
TPM1-231ENST00000561395 TRPC3Q13507 836 aa8.04□□□□□ -1.12
TPM1-231ENST00000561395 GPNMBQ14956 572 aa8.04□□□□□ -1.12
TPM1-231ENST00000561395 TMEM132DQ14C87 1099 aa8.04□□□□□ -1.12
TPM1-231ENST00000561395 ZNF699Q32M78 642 aa8.04□□□□□ -1.12
TPM1-231ENST00000561395 UBXN11Q5T124 520 aa8.04□□□□□ -1.12
TPM1-231ENST00000561395 SCARA3Q6AZY7 606 aa8.04□□□□□ -1.12
TPM1-231ENST00000561395 LRRC8DQ7L1W4 858 aa8.04□□□□□ -1.12
TPM1-231ENST00000561395 NOP9Q86U38 636 aaKnown RBP8.04□□□□□ -1.12
TPM1-231ENST00000561395 SLC47A2Q86VL8 602 aa8.04□□□□□ -1.12
TPM1-231ENST00000561395 GLYCTKQ8IVS8 523 aa8.04□□□□□ -1.12
TPM1-231ENST00000561395 UBR7Q8N806 425 aa8.04□□□□□ -1.12
TPM1-231ENST00000561395 C1orf127Q8N9H9 656 aa8.04□□□□□ -1.12
TPM1-231ENST00000561395 MYRIPQ8NFW9 859 aa8.04□□□□□ -1.12
TPM1-231ENST00000561395 CXorf38Q8TB03 319 aa8.04□□□□□ -1.12
TPM1-231ENST00000561395 CAGE1Q8TC20 777 aa8.04□□□□□ -1.12
TPM1-231ENST00000561395 TAF4BQ92750 862 aa8.04□□□□□ -1.12
TPM1-231ENST00000561395 DDX27Q96GQ7 796 aaKnown RBP8.04□□□□□ -1.12
TPM1-231ENST00000561395 ACAP3Q96P50 834 aa8.04□□□□□ -1.12
TPM1-231ENST00000561395 NAPGQ99747 312 aaPredicted RBP8.04□□□□□ -1.12
TPM1-231ENST00000561395 TMEM121BQ9BXQ6 578 aaPredicted RBP8.04□□□□□ -1.12
TPM1-231ENST00000561395 PACSIN1Q9BY11 444 aa8.04□□□□□ -1.12
TPM1-231ENST00000561395 XYLT2Q9H1B5 865 aa8.04□□□□□ -1.12
TPM1-231ENST00000561395 L2HGDHQ9H9P8 463 aa8.04□□□□□ -1.12
TPM1-231ENST00000561395 PLEKHA5Q9HAU0 1116 aa8.04□□□□□ -1.12
TPM1-231ENST00000561395 SIX4Q9UIU6 781 aa8.04□□□□□ -1.12
TPM1-231ENST00000561395 ITGA11Q9UKX5 1188 aa8.04□□□□□ -1.12
TPM1-231ENST00000561395 INTUQ9ULD6 942 aa8.04□□□□□ -1.12
TPM1-231ENST00000561395 CNTN6Q9UQ52 1028 aa8.04□□□□□ -1.12
TPM1-231ENST00000561395 DERAQ9Y315 318 aa8.04□□□□□ -1.12
TPM1-231ENST00000561395 NOC2LQ9Y3T9 749 aaKnown RBP8.04□□□□□ -1.12
TPM1-231ENST00000561395 C2CD2Q9Y426 696 aa8.04□□□□□ -1.12
TPM1-231ENST00000561395 NCANO14594 1321 aa8.03□□□□□ -1.12
TPM1-231ENST00000561395 PRR23AA6NEV1 266 aa8.03□□□□□ -1.12
TPM1-231ENST00000561395 PROB1E7EW31 1015 aa8.03□□□□□ -1.12
TPM1-231ENST00000561395 H0Y858 1186 aa8.03□□□□□ -1.12
TPM1-231ENST00000561395 NBNO60934 754 aa8.03□□□□□ -1.12
TPM1-231ENST00000561395 TACC1O75410 805 aa8.03□□□□□ -1.12
TPM1-231ENST00000561395 RECQL4O94761 1208 aa8.03□□□□□ -1.12
TPM1-231ENST00000561395 CLSTN1O94985 981 aa8.03□□□□□ -1.12
TPM1-231ENST00000561395 CHRNA1P02708 482 aa8.03□□□□□ -1.12
TPM1-231ENST00000561395 CXCL10P02778 98 aa8.03□□□□□ -1.12
TPM1-231ENST00000561395 ITGB3P05106 788 aa8.03□□□□□ -1.12
TPM1-231ENST00000561395 CTSHP09668 335 aa8.03□□□□□ -1.12
TPM1-231ENST00000561395 H2AFZP0C0S5 128 aa8.03□□□□□ -1.12
TPM1-231ENST00000561395 KRT5P13647 590 aa8.03□□□□□ -1.12
TPM1-231ENST00000561395 CYP11B1P15538 503 aa8.03□□□□□ -1.12
TPM1-231ENST00000561395 TNFAIP3P21580 790 aa8.03□□□□□ -1.12
TPM1-231ENST00000561395 ATICP31939 592 aa8.03□□□□□ -1.12
TPM1-231ENST00000561395 ZNF132P52740 706 aa8.03□□□□□ -1.12
TPM1-231ENST00000561395 YARSP54577 528 aaKnown RBP8.03□□□□□ -1.12
TPM1-231ENST00000561395 ZXDAP98168 799 aa8.03□□□□□ -1.12
TPM1-231ENST00000561395 FMO1Q01740 532 aa8.03□□□□□ -1.12
TPM1-231ENST00000561395 CDR2Q01850 454 aa8.03□□□□□ -1.12
TPM1-231ENST00000561395 PTK7Q13308 1070 aa8.03□□□□□ -1.12
TPM1-231ENST00000561395 GPM6BQ13491 265 aa8.03□□□□□ -1.12
TPM1-231ENST00000561395 PTGISQ16647 500 aa8.03□□□□□ -1.12
TPM1-231ENST00000561395 SGSM1Q2NKQ1 1148 aa8.03□□□□□ -1.12
TPM1-231ENST00000561395 TRIM71Q2Q1W2 868 aaKnown RBP8.03□□□□□ -1.12
TPM1-231ENST00000561395 ALKAL1Q6UXT8 129 aa8.03□□□□□ -1.12
TPM1-231ENST00000561395 H2AFVQ71UI9 128 aa8.03□□□□□ -1.12
TPM1-231ENST00000561395 ZNF677Q86XU0 584 aa8.03□□□□□ -1.12
TPM1-231ENST00000561395 PALB2Q86YC2 1186 aa8.03□□□□□ -1.12
TPM1-231ENST00000561395 RNF10Q8N5U6 811 aaKnown RBP8.03□□□□□ -1.12
TPM1-231ENST00000561395 TRIM58Q8NG06 486 aa8.03□□□□□ -1.12
TPM1-231ENST00000561395 DDX1Q92499 740 aaKnown RBP8.03□□□□□ -1.12
TPM1-231ENST00000561395 FAXDC2Q96IV6 333 aa8.03□□□□□ -1.12
TPM1-231ENST00000561395 SAMD11Q96NU1 681 aa8.03□□□□□ -1.12
TPM1-231ENST00000561395 NOX5Q96PH1 765 aa8.03□□□□□ -1.12
TPM1-231ENST00000561395 TRIM6Q9C030 488 aaPredicted RBP8.03□□□□□ -1.12
TPM1-231ENST00000561395 NXF3Q9H4D5 531 aaKnown RBP8.03□□□□□ -1.12
TPM1-231ENST00000561395 VRTNQ9H8Y1 702 aa8.03□□□□□ -1.12
TPM1-231ENST00000561395 TLR9Q9NR96 1032 aa8.03□□□□□ -1.12
TPM1-231ENST00000561395 SEPT11Q9NVA2 429 aaKnown RBP8.03□□□□□ -1.12
TPM1-231ENST00000561395 SNTG2Q9NY99 539 aa8.03□□□□□ -1.12
TPM1-231ENST00000561395 CNTN3Q9P232 1028 aa8.03□□□□□ -1.12
TPM1-231ENST00000561395 SALL4Q9UJQ4 1053 aa8.03□□□□□ -1.12
TPM1-231ENST00000561395 INSL6Q9Y581 213 aa8.03□□□□□ -1.12
TPM1-231ENST00000561395 PCDHB4Q9Y5E5 795 aa8.03□□□□□ -1.12
TPM1-231ENST00000561395 CAPN6Q9Y6Q1 641 aa8.03□□□□□ -1.12
TPM1-231ENST00000561395 MYH10P35580 1976 aa8.02□□□□□ -1.12
TPM1-231ENST00000561395 CACNA1GO43497 2377 aa8.02□□□□□ -1.13
TPM1-231ENST00000561395 TPRP12270 2363 aaKnown RBP8.02□□□□□ -1.13
TPM1-231ENST00000561395 A0A0A6YYK5 440 aaPredicted RBP8.02□□□□□ -1.13
TPM1-231ENST00000561395 ANO9A1A5B4 782 aa8.02□□□□□ -1.13
TPM1-231ENST00000561395 H3BNC9 293 aa8.02□□□□□ -1.13
TPM1-231ENST00000561395 CAND2O75155 1236 aa8.02□□□□□ -1.13
TPM1-231ENST00000561395 TBX10O75333 385 aa8.02□□□□□ -1.13
TPM1-231ENST00000561395 RPS6KA5O75582 802 aa8.02□□□□□ -1.13
TPM1-231ENST00000561395 URI1O94763 535 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms