RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', human

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRPA1-215	ENST00000561187	SMG5	Q9UPR3	1016 aa	Known RBP	29.18	■■■□□ 2.26
SNRPA1-215	ENST00000561187	MTMR6	Q9Y217	621 aa		29.18	■■■□□ 2.26
SNRPA1-215	ENST00000561187	NUP210	Q8TEM1	1887 aa	Predicted RBP	29.18	■■■□□ 2.26
SNRPA1-215	ENST00000561187	KPNA7	A9QM74	516 aa		29.17	■■■□□ 2.26
SNRPA1-215	ENST00000561187	CCDC73	Q6ZRK6	1079 aa		29.17	■■■□□ 2.26
SNRPA1-215	ENST00000561187	BRSK2	Q8IWQ3	736 aa		29.17	■■■□□ 2.26
SNRPA1-215	ENST00000561187	E2F7	Q96AV8	911 aa		29.17	■■■□□ 2.26
SNRPA1-215	ENST00000561187	BORCS6	Q96GS4	357 aa		29.17	■■■□□ 2.26
SNRPA1-215	ENST00000561187	TRPV5	Q9NQA5	729 aa		29.17	■■■□□ 2.26
SNRPA1-215	ENST00000561187	TMLHE	Q9NVH6	421 aa		29.17	■■■□□ 2.26
SNRPA1-215	ENST00000561187	RBAK	Q9NYW8	714 aa	Predicted RBP	29.17	■■■□□ 2.26
SNRPA1-215	ENST00000561187	GTSE1	Q9NYZ3	720 aa		29.17	■■■□□ 2.26
SNRPA1-215	ENST00000561187	AGAP1	Q9UPQ3	857 aa		29.17	■■■□□ 2.26
SNRPA1-215	ENST00000561187	CHAD	O15335	359 aa		29.16	■■■□□ 2.26
SNRPA1-215	ENST00000561187	PRPF6	O94906	941 aa	Known RBP	29.16	■■■□□ 2.26
SNRPA1-215	ENST00000561187	PAX3	P23760	479 aa		29.16	■■■□□ 2.26
SNRPA1-215	ENST00000561187	TUFM	P49411	452 aa	Known RBP	29.16	■■■□□ 2.26
SNRPA1-215	ENST00000561187	FCHO2	Q0JRZ9	810 aa		29.16	■■■□□ 2.26
SNRPA1-215	ENST00000561187	BFSP1	Q12934	665 aa		29.16	■■■□□ 2.26
SNRPA1-215	ENST00000561187	LPAL2	Q16609	132 aa		29.16	■■■□□ 2.26
SNRPA1-215	ENST00000561187	SDHAF4	Q5VUM1	108 aa		29.16	■■■□□ 2.26
SNRPA1-215	ENST00000561187	LMBRD2	Q68DH5	695 aa	Predicted RBP	29.16	■■■□□ 2.26
SNRPA1-215	ENST00000561187	ZBTB44	Q8NCP5	570 aa		29.16	■■■□□ 2.26
SNRPA1-215	ENST00000561187	IL21	Q9HBE4	155 aa		29.16	■■■□□ 2.26
SNRPA1-215	ENST00000561187	PANK4	Q9NVE7	773 aa		29.16	■■■□□ 2.26
SNRPA1-215	ENST00000561187	ACAT1	P24752	427 aa	Known RBP	29.15	■■■□□ 2.26
SNRPA1-215	ENST00000561187	SATB1	Q01826	763 aa		29.15	■■■□□ 2.26
SNRPA1-215	ENST00000561187	TNK2	Q07912	1038 aa		29.15	■■■□□ 2.26
SNRPA1-215	ENST00000561187	CCDC142	Q17RM4	750 aa		29.15	■■■□□ 2.26
SNRPA1-215	ENST00000561187	TXNDC11	Q6PKC3	985 aa		29.15	■■■□□ 2.26
SNRPA1-215	ENST00000561187	C1orf127	Q8N9H9	656 aa		29.15	■■■□□ 2.26
SNRPA1-215	ENST00000561187	PI4K2A	Q9BTU6	479 aa		29.15	■■■□□ 2.26
SNRPA1-215	ENST00000561187	FGF19	O95750	216 aa		29.14	■■■□□ 2.26
SNRPA1-215	ENST00000561187	KRT19	P08727	400 aa		29.14	■■■□□ 2.26
SNRPA1-215	ENST00000561187	HAPLN1	P10915	354 aa	Predicted RBP	29.14	■■■□□ 2.26
SNRPA1-215	ENST00000561187	CHRNB1	P11230	501 aa		29.14	■■■□□ 2.26
SNRPA1-215	ENST00000561187		Q6ZS52	159 aa		29.14	■■■□□ 2.26
SNRPA1-215	ENST00000561187	PDCL2	Q8N4E4	241 aa		29.14	■■■□□ 2.26
SNRPA1-215	ENST00000561187	GLIS3	Q8NEA6	775 aa		29.14	■■■□□ 2.26
SNRPA1-215	ENST00000561187	SPPL2B	Q8TCT7	592 aa		29.14	■■■□□ 2.26
SNRPA1-215	ENST00000561187	HPS3	Q969F9	1004 aa		29.14	■■■□□ 2.26
SNRPA1-215	ENST00000561187	OLFML3	Q9NRN5	406 aa		29.14	■■■□□ 2.26
SNRPA1-215	ENST00000561187	HSFX1	Q9UBD0	423 aa		29.14	■■■□□ 2.26
SNRPA1-215	ENST00000561187	L1RE1	Q9UN81	338 aa		29.14	■■■□□ 2.26
SNRPA1-215	ENST00000561187	MAGED2	Q9UNF1	606 aa	Predicted RBP	29.14	■■■□□ 2.26
SNRPA1-215	ENST00000561187	KIF26A	Q9ULI4	1882 aa	Predicted RBP	29.13	■■■□□ 2.25
SNRPA1-215	ENST00000561187	HCRT	O43612	131 aa		29.13	■■■□□ 2.25
SNRPA1-215	ENST00000561187	CDC25C	P30307	473 aa		29.13	■■■□□ 2.25
SNRPA1-215	ENST00000561187	TSPY1	Q01534	308 aa		29.13	■■■□□ 2.25
SNRPA1-215	ENST00000561187	GAS6	Q14393	721 aa		29.13	■■■□□ 2.25
SNRPA1-215	ENST00000561187	SLC39A14	Q15043	492 aa		29.13	■■■□□ 2.25
SNRPA1-215	ENST00000561187	STK38	Q15208	465 aa		29.13	■■■□□ 2.25
SNRPA1-215	ENST00000561187	WDR44	Q5JSH3	913 aa		29.13	■■■□□ 2.25
SNRPA1-215	ENST00000561187	DCP1B	Q8IZD4	617 aa	Known RBP	29.13	■■■□□ 2.25
SNRPA1-215	ENST00000561187	MTMR12	Q9C0I1	747 aa		29.13	■■■□□ 2.25
SNRPA1-215	ENST00000561187	TASP1	Q9H6P5	420 aa		29.13	■■■□□ 2.25
SNRPA1-215	ENST00000561187	PDE11A	Q9HCR9	933 aa		29.13	■■■□□ 2.25
SNRPA1-215	ENST00000561187	PCDHB5	Q9Y5E4	795 aa		29.13	■■■□□ 2.25
SNRPA1-215	ENST00000561187	PCDHB13	Q9Y5F0	798 aa		29.13	■■■□□ 2.25
SNRPA1-215	ENST00000561187	SPECC1L-ADORA2A	F8WAN1	911 aa		29.12	■■■□□ 2.25
SNRPA1-215	ENST00000561187	LILRB5	O75023	590 aa		29.12	■■■□□ 2.25
SNRPA1-215	ENST00000561187	PRPF40A	O75400	957 aa	Known RBP	29.12	■■■□□ 2.25
SNRPA1-215	ENST00000561187	CTH	P32929	405 aa		29.12	■■■□□ 2.25
SNRPA1-215	ENST00000561187	PON2	Q15165	354 aa		29.12	■■■□□ 2.25
SNRPA1-215	ENST00000561187	FOXD4L5	Q5VV16	416 aa	Predicted RBP	29.12	■■■□□ 2.25
SNRPA1-215	ENST00000561187	NT5DC4	Q86YG4	428 aa		29.12	■■■□□ 2.25
SNRPA1-215	ENST00000561187	CSGALNACT2	Q8N6G5	542 aa		29.12	■■■□□ 2.25
SNRPA1-215	ENST00000561187	BPIFB1	Q8TDL5	484 aa		29.12	■■■□□ 2.25
SNRPA1-215	ENST00000561187	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	29.12	■■■□□ 2.25
SNRPA1-215	ENST00000561187	NELL1	Q92832	810 aa		29.12	■■■□□ 2.25
SNRPA1-215	ENST00000561187	CACNA1A	O00555	2505 aa		29.11	■■■□□ 2.25
SNRPA1-215	ENST00000561187	FRMD3	A2A2Y4	597 aa		29.11	■■■□□ 2.25
SNRPA1-215	ENST00000561187	STX6	O43752	255 aa		29.11	■■■□□ 2.25
SNRPA1-215	ENST00000561187	TDGF1	P13385	188 aa		29.11	■■■□□ 2.25
SNRPA1-215	ENST00000561187	PNPLA4	P41247	253 aa		29.11	■■■□□ 2.25
SNRPA1-215	ENST00000561187	CCR3	P51677	355 aa		29.11	■■■□□ 2.25
SNRPA1-215	ENST00000561187	ARHGAP29	Q52LW3	1261 aa		29.11	■■■□□ 2.25
SNRPA1-215	ENST00000561187	C2orf15	Q8WU43	125 aa	Known RBP	29.11	■■■□□ 2.25
SNRPA1-215	ENST00000561187	SLC46A2	Q9BY10	475 aa		29.11	■■■□□ 2.25
SNRPA1-215	ENST00000561187	EPC1	Q9H2F5	836 aa		29.11	■■■□□ 2.25
SNRPA1-215	ENST00000561187	C8orf33	Q9H7E9	229 aa	Predicted RBP	29.11	■■■□□ 2.25
SNRPA1-215	ENST00000561187	DDX43	Q9NXZ2	648 aa	Known RBP	29.11	■■■□□ 2.25
SNRPA1-215	ENST00000561187	EXTL3	O43909	919 aa		29.1	■■■□□ 2.25
SNRPA1-215	ENST00000561187	TMEM191B	P0C7N4	346 aa		29.1	■■■□□ 2.25
SNRPA1-215	ENST00000561187	GART	P22102	1010 aa		29.1	■■■□□ 2.25
SNRPA1-215	ENST00000561187	FOXK2	Q01167	660 aa		29.1	■■■□□ 2.25
SNRPA1-215	ENST00000561187	POU5F1	Q01860	360 aa	Known RBP	29.1	■■■□□ 2.25
SNRPA1-215	ENST00000561187	DMWD	Q09019	674 aa		29.1	■■■□□ 2.25
SNRPA1-215	ENST00000561187	ERMP1	Q7Z2K6	904 aa		29.1	■■■□□ 2.25
SNRPA1-215	ENST00000561187	OSTM1	Q86WC4	334 aa		29.1	■■■□□ 2.25
SNRPA1-215	ENST00000561187	MAB21L3	Q8N8X9	362 aa		29.1	■■■□□ 2.25
SNRPA1-215	ENST00000561187	TTC16	Q8NEE8	873 aa		29.1	■■■□□ 2.25
SNRPA1-215	ENST00000561187	CCL26	Q9Y258	94 aa		29.1	■■■□□ 2.25
SNRPA1-215	ENST00000561187	SNX9	Q9Y5X1	595 aa		29.1	■■■□□ 2.25
SNRPA1-215	ENST00000561187	HUS1	O60921	280 aa		29.09	■■■□□ 2.25
SNRPA1-215	ENST00000561187	LDHA	P00338	332 aa	Known RBP	29.09	■■■□□ 2.25
SNRPA1-215	ENST00000561187	HOXC13	P31276	330 aa		29.09	■■■□□ 2.25
SNRPA1-215	ENST00000561187	LRRC32	Q14392	662 aa		29.09	■■■□□ 2.25
SNRPA1-215	ENST00000561187	DDR2	Q16832	855 aa		29.09	■■■□□ 2.25
SNRPA1-215	ENST00000561187	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	29.09	■■■□□ 2.25

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