RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 DDX43Q9NXZ2 648 aaKnown RBP14.74□□□□□ -0.05
RABGGTA-220ENST00000560998 HAO1Q9UJM8 370 aa14.74□□□□□ -0.05
RABGGTA-220ENST00000560998 CHKBQ9Y259 395 aa14.74□□□□□ -0.05
RABGGTA-220ENST00000560998 COQ4Q9Y3A0 265 aa14.74□□□□□ -0.05
RABGGTA-220ENST00000560998 PTPRFP10586 1907 aa14.74□□□□□ -0.05
RABGGTA-220ENST00000560998 DICER1Q9UPY3 1922 aaKnown RBP14.74□□□□□ -0.05
RABGGTA-220ENST00000560998 EPHB2P29323 1055 aa14.74□□□□□ -0.05
RABGGTA-220ENST00000560998 HADHBP55084 474 aaKnown RBP14.74□□□□□ -0.05
RABGGTA-220ENST00000560998 SP2Q02086 613 aa14.74□□□□□ -0.05
RABGGTA-220ENST00000560998 SLC34A1Q06495 639 aa14.74□□□□□ -0.05
RABGGTA-220ENST00000560998 CYP24A1Q07973 514 aa14.74□□□□□ -0.05
RABGGTA-220ENST00000560998 MOGSQ13724 837 aa14.74□□□□□ -0.05
RABGGTA-220ENST00000560998 PRKG1Q13976 671 aa14.74□□□□□ -0.05
RABGGTA-220ENST00000560998 CYP1B1Q16678 543 aa14.74□□□□□ -0.05
RABGGTA-220ENST00000560998 ACBD5Q5T8D3 534 aaPredicted RBP14.74□□□□□ -0.05
RABGGTA-220ENST00000560998 C4orf50Q6ZRC1 276 aa14.74□□□□□ -0.05
RABGGTA-220ENST00000560998 ZNF365Q70YC5 407 aa14.74□□□□□ -0.05
RABGGTA-220ENST00000560998 PHC3Q8NDX5 983 aa14.74□□□□□ -0.05
RABGGTA-220ENST00000560998 TTC8Q8TAM2 541 aa14.74□□□□□ -0.05
RABGGTA-220ENST00000560998 GDAP1Q8TB36 358 aa14.74□□□□□ -0.05
RABGGTA-220ENST00000560998 ZNF212Q9UDV6 495 aa14.74□□□□□ -0.05
RABGGTA-220ENST00000560998 PCDHGA4Q9Y5G9 962 aa14.74□□□□□ -0.05
RABGGTA-220ENST00000560998 SNCAIPQ9Y6H5 919 aa14.74□□□□□ -0.05
RABGGTA-220ENST00000560998 H0Y3Z8 333 aa14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 SGPL1O95470 568 aa14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 CHRNB2P17787 502 aa14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 GTF2H1P32780 548 aa14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 ICAM3P32942 547 aa14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 GPC3P51654 580 aa14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 MFAP3P55082 362 aa14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 RNASELQ05823 741 aaKnown RBP14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 CALCOCO2Q13137 446 aa14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 TCEAL1Q15170 157 aa14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 LONRF1Q17RB8 773 aa14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 XKR3Q5GH77 459 aa14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 LRRC74BQ6ZQY2 392 aa14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 TAS1R3Q7RTX0 852 aa14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 ZC3H18Q86VM9 953 aaKnown RBP14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 UBL4BQ8N7F7 174 aa14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 CHST13Q8NET6 341 aa14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 UHMK1Q8TAS1 419 aaKnown RBP14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 ZNF398Q8TD17 642 aa14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 SCG3Q8WXD2 468 aaKnown RBP14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 POMGNT1Q8WZA1 660 aa14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 SHC3Q92529 594 aa14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 C18orf8Q96DM3 657 aa14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 POP1Q99575 1024 aaKnown RBP14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 SPATA16Q9BXB7 569 aa14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 POLR3FQ9H1D9 316 aaPredicted RBP14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 CDC42EP4Q9H3Q1 356 aaKnown RBP14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 TOPORSQ9NS56 1045 aaPredicted RBP14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 WHRNQ9P202 907 aa14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 ARHGAP28Q9P2N2 729 aa14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 NOCTQ9UK39 431 aaKnown RBP14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 COG5Q9UP83 839 aa14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 MAP3K7O43318 606 aa14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 FTLP02792 175 aaPredicted RBP14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 GARTP22102 1010 aa14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 SLC18A1P54219 525 aa14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 ENPEPQ07075 957 aa14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 STXBP2Q15833 593 aa14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 CNPY1Q3B7I2 92 aa14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 BRDTQ58F21 947 aaPredicted RBP14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 DAB2IPQ5VWQ8 1189 aa14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 C11orf63Q6NUN7 778 aa14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 NOP9Q86U38 636 aaKnown RBP14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 RHOT2Q8IXI1 618 aa14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 ANKRD35Q8N283 1001 aa14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 PPM1KQ8N3J5 372 aa14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 RIBC1Q8N443 379 aaPredicted RBP14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 DNERQ8NFT8 737 aa14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 HELQQ8TDG4 1101 aa14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 EPS8L1Q8TE68 723 aa14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 PPP1R14BQ96C90 147 aa14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 PPP1R12CQ9BZL4 782 aa14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 A0A0G2JMZ2 1700 aa14.73□□□□□ -0.05
RABGGTA-220ENST00000560998 FAM170AA1A519 330 aa14.72□□□□□ -0.05
RABGGTA-220ENST00000560998 H0YCG3 227 aa14.72□□□□□ -0.05
RABGGTA-220ENST00000560998 SMAPO00193 183 aa14.72□□□□□ -0.05
RABGGTA-220ENST00000560998 HNRNPDLO14979 420 aaKnown RBP14.72□□□□□ -0.05
RABGGTA-220ENST00000560998 ENTPD5O75356 428 aa14.72□□□□□ -0.05
RABGGTA-220ENST00000560998 ZWINTO95229 277 aa14.72□□□□□ -0.05
RABGGTA-220ENST00000560998 ATG7O95352 703 aa14.72□□□□□ -0.05
RABGGTA-220ENST00000560998 T-ENOLP0DO92 83 aa14.72□□□□□ -0.05
RABGGTA-220ENST00000560998 CDR2Q01850 454 aa14.72□□□□□ -0.05
RABGGTA-220ENST00000560998 CNTN2Q02246 1040 aa14.72□□□□□ -0.05
RABGGTA-220ENST00000560998 FSTL1Q12841 308 aa14.72□□□□□ -0.05
RABGGTA-220ENST00000560998 NR1H3Q13133 447 aa14.72□□□□□ -0.05
RABGGTA-220ENST00000560998 LSAMPQ13449 338 aa14.72□□□□□ -0.05
RABGGTA-220ENST00000560998 VGLL4Q14135 290 aa14.72□□□□□ -0.05
RABGGTA-220ENST00000560998 MTERF2Q49AM1 385 aa14.72□□□□□ -0.05
RABGGTA-220ENST00000560998 SLC45A4Q5BKX6 768 aa14.72□□□□□ -0.05
RABGGTA-220ENST00000560998 TREML2Q5T2D2 321 aa14.72□□□□□ -0.05
RABGGTA-220ENST00000560998 GPD1LQ8N335 351 aa14.72□□□□□ -0.05
RABGGTA-220ENST00000560998 PRELID2Q8N945 189 aa14.72□□□□□ -0.05
RABGGTA-220ENST00000560998 TAS1R2Q8TE23 839 aa14.72□□□□□ -0.05
RABGGTA-220ENST00000560998 PCDHB18PQ96TA0 734 aa14.72□□□□□ -0.05
RABGGTA-220ENST00000560998 ZCWPW1Q9H0M4 648 aa14.72□□□□□ -0.05
RABGGTA-220ENST00000560998 MMADHCQ9H3L0 296 aaPredicted RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms