RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 TRIM32Q13049 653 aa14.93□□□□□ -0.02
CARMIL3-203ENST00000560349 ERICH1Q86X53 443 aa14.93□□□□□ -0.02
CARMIL3-203ENST00000560349 TMEM35BQ8NCS4 154 aa14.93□□□□□ -0.02
CARMIL3-203ENST00000560349 FAM76AQ8TAV0 307 aa14.93□□□□□ -0.02
CARMIL3-203ENST00000560349 FEZF2Q8TBJ5 459 aa14.93□□□□□ -0.02
CARMIL3-203ENST00000560349 RUBCNQ92622 972 aa14.93□□□□□ -0.02
CARMIL3-203ENST00000560349 TRIM11Q96F44 468 aa14.93□□□□□ -0.02
CARMIL3-203ENST00000560349 RUFY1Q96T51 708 aa14.93□□□□□ -0.02
CARMIL3-203ENST00000560349 TRIM6Q9C030 488 aaPredicted RBP14.93□□□□□ -0.02
CARMIL3-203ENST00000560349 CENPHQ9H3R5 247 aa14.93□□□□□ -0.02
CARMIL3-203ENST00000560349 GOLGA6AQ9NYA3 693 aa14.93□□□□□ -0.02
CARMIL3-203ENST00000560349 CACNG4Q9UBN1 327 aa14.93□□□□□ -0.02
CARMIL3-203ENST00000560349 ZSWIM8A7E2V4 1837 aa14.93□□□□□ -0.02
CARMIL3-203ENST00000560349 CITO14578 2027 aa14.93□□□□□ -0.02
CARMIL3-203ENST00000560349 NRCAMQ92823 1304 aa14.92□□□□□ -0.02
CARMIL3-203ENST00000560349 HSF2BPO75031 334 aa14.92□□□□□ -0.02
CARMIL3-203ENST00000560349 KRT10P13645 584 aa14.92□□□□□ -0.02
CARMIL3-203ENST00000560349 PSEN2P49810 448 aa14.92□□□□□ -0.02
CARMIL3-203ENST00000560349 C1QBPQ07021 282 aaKnown RBP14.92□□□□□ -0.02
CARMIL3-203ENST00000560349 SMTNL2Q2TAL5 461 aa14.92□□□□□ -0.02
CARMIL3-203ENST00000560349 FAM182AQ5T1J6 154 aa14.92□□□□□ -0.02
CARMIL3-203ENST00000560349 JOSD2Q8TAC2 188 aa14.92□□□□□ -0.02
CARMIL3-203ENST00000560349 HEXIM2Q96MH2 286 aaKnown RBP14.92□□□□□ -0.02
CARMIL3-203ENST00000560349 BCO2Q9BYV7 579 aa14.92□□□□□ -0.02
CARMIL3-203ENST00000560349 GCOM2Q9BZD3 368 aaPredicted RBP14.92□□□□□ -0.02
CARMIL3-203ENST00000560349 PARVAQ9NVD7 372 aa14.92□□□□□ -0.02
CARMIL3-203ENST00000560349 M0QYV0 167 aa14.92□□□□□ -0.02
CARMIL3-203ENST00000560349 NDST1P52848 882 aa14.92□□□□□ -0.02
CARMIL3-203ENST00000560349 UAP1Q16222 522 aaPredicted RBP14.92□□□□□ -0.02
CARMIL3-203ENST00000560349 SGO2Q562F6 1265 aa14.92□□□□□ -0.02
CARMIL3-203ENST00000560349 CFAP58Q5T655 872 aa14.92□□□□□ -0.02
CARMIL3-203ENST00000560349 TRPV1Q8NER1 839 aa14.92□□□□□ -0.02
CARMIL3-203ENST00000560349 FBXO25Q8TCJ0 367 aa14.92□□□□□ -0.02
CARMIL3-203ENST00000560349 UBLCP1Q8WVY7 318 aaPredicted RBP14.92□□□□□ -0.02
CARMIL3-203ENST00000560349 HAUS1Q96CS2 278 aa14.92□□□□□ -0.02
CARMIL3-203ENST00000560349 SH3GL2Q99962 352 aa14.92□□□□□ -0.02
CARMIL3-203ENST00000560349 ERP44Q9BS26 406 aa14.92□□□□□ -0.02
CARMIL3-203ENST00000560349 SYNCQ9H7C4 482 aa14.92□□□□□ -0.02
CARMIL3-203ENST00000560349 MRPL47Q9HD33 250 aaKnown RBP14.92□□□□□ -0.02
CARMIL3-203ENST00000560349 FAM49BQ9NUQ9 324 aa14.92□□□□□ -0.02
CARMIL3-203ENST00000560349 SNX9Q9Y5X1 595 aa14.92□□□□□ -0.02
CARMIL3-203ENST00000560349 CLGNO14967 610 aa14.91□□□□□ -0.02
CARMIL3-203ENST00000560349 RECQL4O94761 1208 aa14.91□□□□□ -0.02
CARMIL3-203ENST00000560349 HSD17B3P37058 310 aa14.91□□□□□ -0.02
CARMIL3-203ENST00000560349 PTGIRP43119 386 aa14.91□□□□□ -0.02
CARMIL3-203ENST00000560349 RPL21P46778 160 aaKnown RBP14.91□□□□□ -0.02
CARMIL3-203ENST00000560349 PTPN11Q06124 597 aaPredicted RBP14.91□□□□□ -0.02
CARMIL3-203ENST00000560349 TTMPQ5BVD1 217 aa14.91□□□□□ -0.02
CARMIL3-203ENST00000560349 TTC19Q6DKK2 380 aaPredicted RBP14.91□□□□□ -0.02
CARMIL3-203ENST00000560349 ZNF410Q86VK4 478 aa14.91□□□□□ -0.02
CARMIL3-203ENST00000560349 ASB7Q9H672 318 aa14.91□□□□□ -0.02
CARMIL3-203ENST00000560349 GABRQQ9UN88 632 aa14.91□□□□□ -0.02
CARMIL3-203ENST00000560349 PLAAQ9Y263 795 aa14.91□□□□□ -0.02
CARMIL3-203ENST00000560349 ATP8A1Q9Y2Q0 1164 aa14.91□□□□□ -0.02
CARMIL3-203ENST00000560349 CILPO75339 1184 aa14.91□□□□□ -0.02
CARMIL3-203ENST00000560349 CTSHP09668 335 aa14.91□□□□□ -0.02
CARMIL3-203ENST00000560349 DARSP14868 501 aaKnown RBP14.91□□□□□ -0.02
CARMIL3-203ENST00000560349 ATF7P17544 494 aaPredicted RBP14.91□□□□□ -0.02
CARMIL3-203ENST00000560349 RFC1P35251 1148 aaPredicted RBP14.91□□□□□ -0.02
CARMIL3-203ENST00000560349 IRAK1P51617 712 aa14.91□□□□□ -0.02
CARMIL3-203ENST00000560349 CAP1Q01518 475 aa14.91□□□□□ -0.02
CARMIL3-203ENST00000560349 CUL1Q13616 776 aa14.91□□□□□ -0.02
CARMIL3-203ENST00000560349 FSCN1Q16658 493 aaKnown RBP14.91□□□□□ -0.02
CARMIL3-203ENST00000560349 KCNT1Q5JUK3 1230 aa14.91□□□□□ -0.02
CARMIL3-203ENST00000560349 CXCL17Q6UXB2 119 aa14.91□□□□□ -0.02
CARMIL3-203ENST00000560349 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.91□□□□□ -0.02
CARMIL3-203ENST00000560349 USP6NLQ92738 828 aa14.91□□□□□ -0.02
CARMIL3-203ENST00000560349 PIWIL1Q96J94 861 aaKnown RBP14.91□□□□□ -0.02
CARMIL3-203ENST00000560349 AP5M1Q9H0R1 490 aa14.91□□□□□ -0.02
CARMIL3-203ENST00000560349 CEP83Q9Y592 693 aa14.91□□□□□ -0.02
CARMIL3-203ENST00000560349 SCINQ9Y6U3 715 aa14.91□□□□□ -0.02
CARMIL3-203ENST00000560349 TMEM191CA6NGB0 347 aa14.9□□□□□ -0.02
CARMIL3-203ENST00000560349 RRN3P2A6NIE6 340 aa14.9□□□□□ -0.02
CARMIL3-203ENST00000560349 GRAP2O75791 330 aa14.9□□□□□ -0.02
CARMIL3-203ENST00000560349 MICAL2O94851 1124 aa14.9□□□□□ -0.02
CARMIL3-203ENST00000560349 ERBB2P04626 1255 aa14.9□□□□□ -0.02
CARMIL3-203ENST00000560349 CYP3A5P20815 502 aa14.9□□□□□ -0.02
CARMIL3-203ENST00000560349 EIF4BP23588 611 aaKnown RBP14.9□□□□□ -0.02
CARMIL3-203ENST00000560349 COILP38432 576 aaPredicted RBP14.9□□□□□ -0.02
CARMIL3-203ENST00000560349 RGS2P41220 211 aa14.9□□□□□ -0.02
CARMIL3-203ENST00000560349 RGS7P49802 495 aa14.9□□□□□ -0.02
CARMIL3-203ENST00000560349 DHX9Q08211 1270 aaKnown RBP14.9□□□□□ -0.02
CARMIL3-203ENST00000560349 SNX17Q15036 470 aa14.9□□□□□ -0.02
CARMIL3-203ENST00000560349 DUPD1Q68J44 220 aa14.9□□□□□ -0.02
CARMIL3-203ENST00000560349 SLC27A1Q6PCB7 646 aa14.9□□□□□ -0.02
CARMIL3-203ENST00000560349 UHMK1Q8TAS1 419 aaKnown RBP14.9□□□□□ -0.02
CARMIL3-203ENST00000560349 TMEM176AQ96HP8 235 aa14.9□□□□□ -0.02
CARMIL3-203ENST00000560349 MRPL45Q9BRJ2 306 aaKnown RBP14.9□□□□□ -0.02
CARMIL3-203ENST00000560349 IGFBP6P24592 240 aaPredicted RBP14.9□□□□□ -0.02
CARMIL3-203ENST00000560349 GRM5P41594 1212 aa14.9□□□□□ -0.02
CARMIL3-203ENST00000560349 PSMC1P62191 440 aaKnown RBP14.9□□□□□ -0.02
CARMIL3-203ENST00000560349 RAB6CQ53S08 254 aa14.9□□□□□ -0.02
CARMIL3-203ENST00000560349 CCDC114Q96M63 670 aa14.9□□□□□ -0.02
CARMIL3-203ENST00000560349 APBA2Q99767 749 aa14.9□□□□□ -0.02
CARMIL3-203ENST00000560349 RAB6CQ9H0N0 254 aa14.9□□□□□ -0.02
CARMIL3-203ENST00000560349 RABEP2Q9H5N1 569 aa14.9□□□□□ -0.02
CARMIL3-203ENST00000560349 METTL5Q9NRN9 209 aaKnown RBP14.9□□□□□ -0.02
CARMIL3-203ENST00000560349 DNAJC17Q9NVM6 304 aaKnown RBP14.9□□□□□ -0.02
CARMIL3-203ENST00000560349 PARP2Q9UGN5 583 aa14.9□□□□□ -0.02
CARMIL3-203ENST00000560349 MTUS1Q9ULD2 1270 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms