RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 PHLPP1O60346 1717 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 BAZ2AQ9UIF9 1905 aaKnown RBP6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 FRMPD4Q14CM0 1322 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 KDM3AQ9Y4C1 1321 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 SIGLEC16A6NMB1 481 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 TCP11X1B4DZS4 312 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 NVLO15381 856 aaKnown RBP6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 SIN3BO75182 1162 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 AFPP02771 609 aaKnown RBP6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 SHBGP04278 402 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 CTNNA2P26232 953 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 PTPN4P29074 926 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 MAN1A1P33908 653 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 ADH7P40394 386 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 CDK8P49336 464 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 AP3B2Q13367 1082 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 SLC29A2Q14542 456 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 NONOQ15233 471 aaKnown RBP eCLIP6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 TXNRD1Q16881 649 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 TMEM266Q2M3C6 531 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 GNPTABQ3T906 1256 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 TMEM119Q4V9L6 283 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 PABPC1LQ4VXU2 614 aaKnown RBP6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 HYIQ5T013 277 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 DAB2IPQ5VWQ8 1189 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 C11orf63Q6NUN7 778 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 ALKBH5Q6P6C2 394 aaKnown RBP6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 TXNDC11Q6PKC3 985 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 VSTM1Q6UX27 236 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 FAM43BQ6ZT52 329 aaPredicted RBP6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 SPATC1Q76KD6 591 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 IRF2BP2Q7Z5L9 587 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 FRMD5Q7Z6J6 570 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 TRIM74Q86UV6 250 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 TRIM73Q86UV7 250 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 EXOC3L1Q86VI1 746 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 DGKHQ86XP1 1220 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 FAM178BQ8IXR5 827 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 C12orf50Q8NA57 414 aaPredicted RBP6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 PPFIBP2Q8ND30 876 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 LRRC15Q8TF66 581 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 CTNNBL1Q8WYA6 563 aaPredicted RBP6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 IRGQQ8WZA9 623 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 LARP4BQ92615 738 aaKnown RBP6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 RAD54LQ92698 747 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 ART4Q93070 314 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 UTP4Q969X6 686 aaKnown RBP6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 PLEKHG4BQ96PX9 1271 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 HAPLN3Q96S86 360 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 AP1M1Q9BXS5 423 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 PACSIN1Q9BY11 444 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 FOXP3Q9BZS1 431 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 ADAM19Q9H013 955 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 DPH5Q9H2P9 285 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 MMADHCQ9H3L0 296 aaPredicted RBP6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 EPB41L1Q9H4G0 881 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 SUDS3Q9H7L9 328 aaPredicted RBP6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 PPCSQ9HAB8 311 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 BLOC1S4Q9NUP1 217 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 TYW1Q9NV66 732 aaKnown RBP6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 FGFR1OP2Q9NVK5 253 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 DDX43Q9NXZ2 648 aaKnown RBP6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 BARHL2Q9NY43 387 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 NDUFA13Q9P0J0 144 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 WHRNQ9P202 907 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 ZNF212Q9UDV6 495 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 DNAJB4Q9UDY4 337 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 PACSIN2Q9UNF0 486 aaPredicted RBP6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 STK38LQ9Y2H1 464 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 OAS3Q9Y6K5 1087 aaKnown RBP6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 COMMD3-BMI1R4GMX3 469 aa6.33□□□□□ -1.4
SNRPA1-209ENST00000560307 ZNF804BA4D1E1 1349 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 PASKQ96RG2 1323 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 TMEM120BA0PK00 339 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 MYMKA6NI61 221 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 PP2D1A8MPX8 630 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 A8MUI8 341 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 A8MXQ7 604 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 BTBD19C9JJ37 291 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 SOX1O00570 391 aaPredicted RBP6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 SLC16A3O15427 465 aaKnown RBP6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 CYP27B1O15528 508 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 ZSCAN9O15535 394 aaPredicted RBP6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 PRKAB2O43741 272 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 ZWINTO95229 277 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 FGGP02679 453 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 CCDC166P0CW27 439 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 PIM1P11309 404 aaPredicted RBP6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 ITGA4P13612 1032 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 EPHA1P21709 976 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 MUTP22033 750 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 MARK3P27448 753 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 GNA11P29992 359 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 STX2P32856 288 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 EPS15P42566 896 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 PTDSS1P48651 473 aaKnown RBP6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 JAM2P57087 298 aa6.32□□□□□ -1.4
SNRPA1-209ENST00000560307 IFI35P80217 286 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms