RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 GPR17Q13304 367 aa9.16□□□□□ -0.94
USP3-217ENST00000560070 DDR2Q16832 855 aa9.16□□□□□ -0.94
USP3-217ENST00000560070 DPCR1Q3MIW9 517 aa9.16□□□□□ -0.94
USP3-217ENST00000560070 MGAT5BQ3V5L5 792 aa9.16□□□□□ -0.94
USP3-217ENST00000560070 CBWD6Q4V339 395 aa9.16□□□□□ -0.94
USP3-217ENST00000560070 CBWD3Q5JTY5 395 aa9.16□□□□□ -0.94
USP3-217ENST00000560070 CBWD5Q5RIA9 395 aa9.16□□□□□ -0.94
USP3-217ENST00000560070 TPGS2Q68CL5 300 aa9.16□□□□□ -0.94
USP3-217ENST00000560070 CAVIN1Q6NZI2 390 aaKnown RBP9.16□□□□□ -0.94
USP3-217ENST00000560070 SASS6Q6UVJ0 657 aa9.16□□□□□ -0.94
USP3-217ENST00000560070 DPH6Q7L8W6 267 aa9.16□□□□□ -0.94
USP3-217ENST00000560070 GPIHBP1Q8IV16 184 aa9.16□□□□□ -0.94
USP3-217ENST00000560070 SCN4BQ8IWT1 228 aa9.16□□□□□ -0.94
USP3-217ENST00000560070 ADHFE1Q8IWW8 467 aa9.16□□□□□ -0.94
USP3-217ENST00000560070 TCEAL8Q8IYN2 117 aa9.16□□□□□ -0.94
USP3-217ENST00000560070 TMEM86AQ8N2M4 240 aa9.16□□□□□ -0.94
USP3-217ENST00000560070 TOP6BLQ8N6T0 577 aa9.16□□□□□ -0.94
USP3-217ENST00000560070 STKLD1Q8NE28 680 aa9.16□□□□□ -0.94
USP3-217ENST00000560070 ITFG1Q8TB96 612 aa9.16□□□□□ -0.94
USP3-217ENST00000560070 KBTBD7Q8WVZ9 684 aa9.16□□□□□ -0.94
USP3-217ENST00000560070 ING5Q8WYH8 240 aa9.16□□□□□ -0.94
USP3-217ENST00000560070 TATDN2Q93075 761 aa9.16□□□□□ -0.94
USP3-217ENST00000560070 ZNF512Q96ME7 567 aaPredicted RBP9.16□□□□□ -0.94
USP3-217ENST00000560070 CEP63Q96MT8 703 aa9.16□□□□□ -0.94
USP3-217ENST00000560070 ACBD6Q9BR61 282 aa9.16□□□□□ -0.94
USP3-217ENST00000560070 MKNK1Q9BUB5 465 aa9.16□□□□□ -0.94
USP3-217ENST00000560070 OXCT2Q9BYC2 517 aaPredicted RBP9.16□□□□□ -0.94
USP3-217ENST00000560070 RHOBTB2Q9BYZ6 727 aa9.16□□□□□ -0.94
USP3-217ENST00000560070 DPEP3Q9H4B8 488 aa9.16□□□□□ -0.94
USP3-217ENST00000560070 APOBEC3GQ9HC16 384 aaKnown RBP9.16□□□□□ -0.94
USP3-217ENST00000560070 TMEM8AQ9HCN3 771 aa9.16□□□□□ -0.94
USP3-217ENST00000560070 CEP72Q9P209 647 aa9.16□□□□□ -0.94
USP3-217ENST00000560070 RWDD2AQ9UIY3 292 aa9.16□□□□□ -0.94
USP3-217ENST00000560070 PCDHB5Q9Y5E4 795 aa9.16□□□□□ -0.94
USP3-217ENST00000560070 FNDC1Q4ZHG4 1894 aaPredicted RBP9.15□□□□□ -0.94
USP3-217ENST00000560070 CLDN5O00501 218 aa9.15□□□□□ -0.94
USP3-217ENST00000560070 GABRDO14764 452 aa9.15□□□□□ -0.94
USP3-217ENST00000560070 FGFR1OPO95684 399 aaKnown RBP9.15□□□□□ -0.94
USP3-217ENST00000560070 MBD3O95983 291 aa9.15□□□□□ -0.94
USP3-217ENST00000560070 C1RP00736 705 aa9.15□□□□□ -0.94
USP3-217ENST00000560070 RHOP08100 348 aa9.15□□□□□ -0.94
USP3-217ENST00000560070 MYL4P12829 197 aa9.15□□□□□ -0.94
USP3-217ENST00000560070 GJA1P17302 382 aa9.15□□□□□ -0.94
USP3-217ENST00000560070 PTPN2P17706 415 aa9.15□□□□□ -0.94
USP3-217ENST00000560070 PTPN1P18031 435 aaKnown RBP9.15□□□□□ -0.94
USP3-217ENST00000560070 CD58P19256 250 aa9.15□□□□□ -0.94
USP3-217ENST00000560070 WARSP23381 471 aaKnown RBP9.15□□□□□ -0.94
USP3-217ENST00000560070 FSHRP23945 695 aa9.15□□□□□ -0.94
USP3-217ENST00000560070 CYP2F1P24903 491 aa9.15□□□□□ -0.94
USP3-217ENST00000560070 PCSK1P29120 753 aa9.15□□□□□ -0.94
USP3-217ENST00000560070 GTF2H1P32780 548 aa9.15□□□□□ -0.94
USP3-217ENST00000560070 MXI1P50539 228 aa9.15□□□□□ -0.94
USP3-217ENST00000560070 EPHB3P54753 998 aa9.15□□□□□ -0.94
USP3-217ENST00000560070 ZP2Q05996 745 aa9.15□□□□□ -0.94
USP3-217ENST00000560070 MDH1BQ5I0G3 518 aa9.15□□□□□ -0.94
USP3-217ENST00000560070 WDR44Q5JSH3 913 aa9.15□□□□□ -0.94
USP3-217ENST00000560070 CCDC183Q5T5S1 534 aa9.15□□□□□ -0.94
USP3-217ENST00000560070 KRT39Q6A163 491 aa9.15□□□□□ -0.94
USP3-217ENST00000560070 IQCEQ6IPM2 695 aa9.15□□□□□ -0.94
USP3-217ENST00000560070 C15orf39Q6ZRI6 1047 aa9.15□□□□□ -0.94
USP3-217ENST00000560070 GET4Q7L5D6 327 aaPredicted RBP9.15□□□□□ -0.94
USP3-217ENST00000560070 FRMD5Q7Z6J6 570 aa9.15□□□□□ -0.94
USP3-217ENST00000560070 SPATA2LQ8IUW3 424 aaPredicted RBP9.15□□□□□ -0.94
USP3-217ENST00000560070 ZC3H3Q8IXZ2 948 aaKnown RBP9.15□□□□□ -0.94
USP3-217ENST00000560070 ELMOD1Q8N336 334 aa9.15□□□□□ -0.94
USP3-217ENST00000560070 CCDC150Q8NCX0 1101 aa9.15□□□□□ -0.94
USP3-217ENST00000560070 CMASQ8NFW8 434 aaPredicted RBP9.15□□□□□ -0.94
USP3-217ENST00000560070 KHSRPQ92945 711 aaKnown RBP eCLIP9.15□□□□□ -0.941e-6■■□□□ 14.1
USP3-217ENST00000560070 TCEAL4Q96EI5 215 aa9.15□□□□□ -0.94
USP3-217ENST00000560070 MCRS1Q96EZ8 462 aa9.15□□□□□ -0.94
USP3-217ENST00000560070 NECTIN4Q96NY8 510 aa9.15□□□□□ -0.94
USP3-217ENST00000560070 MYADMQ96S97 322 aa9.15□□□□□ -0.94
USP3-217ENST00000560070 SYT15Q9BQS2 421 aa9.15□□□□□ -0.94
USP3-217ENST00000560070 MED10Q9BTT4 135 aa9.15□□□□□ -0.94
USP3-217ENST00000560070 METTL14Q9HCE5 456 aaKnown RBP9.15□□□□□ -0.94
USP3-217ENST00000560070 WDR6Q9NNW5 1121 aaKnown RBP9.15□□□□□ -0.94
USP3-217ENST00000560070 RAB20Q9NX57 234 aa9.15□□□□□ -0.94
USP3-217ENST00000560070 TMEM63CQ9P1W3 806 aa9.15□□□□□ -0.94
USP3-217ENST00000560070 MAGEC2Q9UBF1 373 aaPredicted RBP9.15□□□□□ -0.94
USP3-217ENST00000560070 CDH9Q9ULB4 789 aa9.15□□□□□ -0.94
USP3-217ENST00000560070 MAGED2Q9UNF1 606 aaPredicted RBP9.15□□□□□ -0.94
USP3-217ENST00000560070 YIPF1Q9Y548 306 aa9.15□□□□□ -0.94
USP3-217ENST00000560070 NME7Q9Y5B8 376 aa9.15□□□□□ -0.94
USP3-217ENST00000560070 INSL5Q9Y5Q6 135 aa9.15□□□□□ -0.94
USP3-217ENST00000560070 COL4A4P53420 1690 aaPredicted RBP9.14□□□□□ -0.95
USP3-217ENST00000560070 CLUHO75153 1309 aa9.14□□□□□ -0.95
USP3-217ENST00000560070 LOC730098B7Z3J9 87 aa9.14□□□□□ -0.95
USP3-217ENST00000560070 TNFRSF10AO00220 468 aa9.14□□□□□ -0.95
USP3-217ENST00000560070 TACC1O75410 805 aa9.14□□□□□ -0.95
USP3-217ENST00000560070 ASS1P00966 412 aaKnown RBP9.14□□□□□ -0.95
USP3-217ENST00000560070 ASGR2P07307 311 aa9.14□□□□□ -0.95
USP3-217ENST00000560070 CCDC192P0DO97 292 aa9.14□□□□□ -0.95
USP3-217ENST00000560070 HAPLN1P10915 354 aaPredicted RBP9.14□□□□□ -0.95
USP3-217ENST00000560070 P4HA1P13674 534 aa9.14□□□□□ -0.95
USP3-217ENST00000560070 BDNFP23560 247 aa9.14□□□□□ -0.95
USP3-217ENST00000560070 MTIF2P46199 727 aaKnown RBP9.14□□□□□ -0.95
USP3-217ENST00000560070 TUFMP49411 452 aaKnown RBP9.14□□□□□ -0.95
USP3-217ENST00000560070 NDST1P52848 882 aa9.14□□□□□ -0.95
USP3-217ENST00000560070 KCNH2Q12809 1159 aa9.14□□□□□ -0.95
USP3-217ENST00000560070 MTMR3Q13615 1198 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms