RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 NXF1Q9UBU9 619 aaKnown RBP18.03■□□□□ 0.48
RPL28-209ENST00000560055 FAM50BQ9Y247 325 aa18.03■□□□□ 0.48
RPL28-209ENST00000560055 NME7Q9Y5B8 376 aa18.03■□□□□ 0.48
RPL28-209ENST00000560055 CCDC195A0A1B0GUA6 201 aa18.02■□□□□ 0.48
RPL28-209ENST00000560055 MTMR11A4FU01 709 aa18.02■□□□□ 0.48
RPL28-209ENST00000560055 HCRTO43612 131 aa18.02■□□□□ 0.48
RPL28-209ENST00000560055 HNRNPA1P09651 372 aaKnown RBP eCLIP18.02■□□□□ 0.48
RPL28-209ENST00000560055 CCDC192P0DO97 292 aa18.02■□□□□ 0.48
RPL28-209ENST00000560055 LMO2P25791 158 aa18.02■□□□□ 0.48
RPL28-209ENST00000560055 ASPAP45381 313 aa18.02■□□□□ 0.48
RPL28-209ENST00000560055 NOP14P78316 857 aaKnown RBP18.02■□□□□ 0.48
RPL28-209ENST00000560055 MYL7Q01449 175 aa18.02■□□□□ 0.48
RPL28-209ENST00000560055 ADCY1Q08828 1119 aa18.02■□□□□ 0.48
RPL28-209ENST00000560055 CBX2Q14781 532 aaPredicted RBP18.02■□□□□ 0.48
RPL28-209ENST00000560055 STX1AQ16623 288 aa18.02■□□□□ 0.48
RPL28-209ENST00000560055 INTS6LQ5JSJ4 861 aaKnown RBP18.02■□□□□ 0.48
RPL28-209ENST00000560055 SPOPLQ6IQ16 392 aa18.02■□□□□ 0.48
RPL28-209ENST00000560055 CES5AQ6NT32 575 aa18.02■□□□□ 0.48
RPL28-209ENST00000560055 CCDC149Q6ZUS6 474 aa18.02■□□□□ 0.48
RPL28-209ENST00000560055 CNOT6LQ96LI5 555 aaKnown RBP18.02■□□□□ 0.48
RPL28-209ENST00000560055 PGLYRP2Q96PD5 576 aa18.02■□□□□ 0.48
RPL28-209ENST00000560055 PRKD2Q9BZL6 878 aa18.02■□□□□ 0.48
RPL28-209ENST00000560055 CRISPLD1Q9H336 500 aa18.02■□□□□ 0.48
RPL28-209ENST00000560055 THAP9Q9H5L6 903 aa18.02■□□□□ 0.48
RPL28-209ENST00000560055 SMYD3Q9H7B4 428 aa18.02■□□□□ 0.48
RPL28-209ENST00000560055 CD320Q9NPF0 282 aa18.02■□□□□ 0.48
RPL28-209ENST00000560055 RAB20Q9NX57 234 aa18.02■□□□□ 0.48
RPL28-209ENST00000560055 SPDYE4A6NLX3 237 aa18.01■□□□□ 0.47
RPL28-209ENST00000560055 ACAT1P24752 427 aaKnown RBP18.01■□□□□ 0.47
RPL28-209ENST00000560055 PCSK1P29120 753 aa18.01■□□□□ 0.47
RPL28-209ENST00000560055 FMO5P49326 533 aa18.01■□□□□ 0.47
RPL28-209ENST00000560055 TSPY1Q01534 308 aa18.01■□□□□ 0.47
RPL28-209ENST00000560055 TYRO3Q06418 890 aa18.01■□□□□ 0.47
RPL28-209ENST00000560055 SMARCB1Q12824 385 aa18.01■□□□□ 0.47
RPL28-209ENST00000560055 SLC39A12Q504Y0 691 aa18.01■□□□□ 0.47
RPL28-209ENST00000560055 PPM1LQ5SGD2 360 aa18.01■□□□□ 0.47
RPL28-209ENST00000560055 C11orf57Q6ZUT1 292 aaPredicted RBP18.01■□□□□ 0.47
RPL28-209ENST00000560055 ENOX1Q8TC92 643 aaKnown RBP18.01■□□□□ 0.47
RPL28-209ENST00000560055 KHSRPQ92945 711 aaKnown RBP eCLIP18.01■□□□□ 0.47
RPL28-209ENST00000560055 NECTIN4Q96NY8 510 aa18.01■□□□□ 0.47
RPL28-209ENST00000560055 BCO2Q9BYV7 579 aa18.01■□□□□ 0.47
RPL28-209ENST00000560055 IMPG2Q9BZV3 1241 aa18.01■□□□□ 0.47
RPL28-209ENST00000560055 SDCBP2Q9H190 292 aa18.01■□□□□ 0.47
RPL28-209ENST00000560055 CYP4F11Q9HBI6 524 aa18.01■□□□□ 0.47
RPL28-209ENST00000560055 TMLHEQ9NVH6 421 aa18.01■□□□□ 0.47
RPL28-209ENST00000560055 HSFX1Q9UBD0 423 aa18.01■□□□□ 0.47
RPL28-209ENST00000560055 PRRG1O14668 218 aa18■□□□□ 0.47
RPL28-209ENST00000560055 P4HA2O15460 535 aa18■□□□□ 0.47
RPL28-209ENST00000560055 WEE2P0C1S8 567 aa18■□□□□ 0.47
RPL28-209ENST00000560055 P4HA1P13674 534 aa18■□□□□ 0.47
RPL28-209ENST00000560055 ELF1P32519 619 aa18■□□□□ 0.47
RPL28-209ENST00000560055 MTHFRP42898 656 aa18■□□□□ 0.47
RPL28-209ENST00000560055 CDH8P55286 799 aa18■□□□□ 0.47
RPL28-209ENST00000560055 ATAT1Q5SQI0 421 aa18■□□□□ 0.47
RPL28-209ENST00000560055 FAM171BQ6P995 826 aa18■□□□□ 0.47
RPL28-209ENST00000560055 DCP1BQ8IZD4 617 aaKnown RBP18■□□□□ 0.47
RPL28-209ENST00000560055 ATAD1Q8NBU5 361 aa18■□□□□ 0.47
RPL28-209ENST00000560055 C2orf15Q8WU43 125 aaKnown RBP18■□□□□ 0.47
RPL28-209ENST00000560055 FAXDC2Q96IV6 333 aa18■□□□□ 0.47
RPL28-209ENST00000560055 RIPOR3Q96MK2 946 aa18■□□□□ 0.47
RPL28-209ENST00000560055 NIF3L1Q9GZT8 377 aa18■□□□□ 0.47
RPL28-209ENST00000560055 CDH9Q9ULB4 789 aa18■□□□□ 0.47
RPL28-209ENST00000560055 INSL5Q9Y5Q6 135 aa18■□□□□ 0.47
RPL28-209ENST00000560055 C2orf16Q68DN1 1984 aa17.99■□□□□ 0.47
RPL28-209ENST00000560055 N4BP1O75113 896 aaKnown RBP17.99■□□□□ 0.47
RPL28-209ENST00000560055 GNL1P36915 607 aaPredicted RBP17.99■□□□□ 0.47
RPL28-209ENST00000560055 RAP1GAPP47736 663 aa17.99■□□□□ 0.47
RPL28-209ENST00000560055 KCNH2Q12809 1159 aa17.99■□□□□ 0.47
RPL28-209ENST00000560055 DUSP4Q13115 394 aa17.99■□□□□ 0.47
RPL28-209ENST00000560055 NFE2Q16621 373 aaPredicted RBP17.99■□□□□ 0.47
RPL28-209ENST00000560055 TPD52L1Q16890 204 aaPredicted RBP17.99■□□□□ 0.47
RPL28-209ENST00000560055 CCDC142Q17RM4 750 aa17.99■□□□□ 0.47
RPL28-209ENST00000560055 SCARA5Q6ZMJ2 495 aa17.99■□□□□ 0.47
RPL28-209ENST00000560055 TTC9BQ8N6N2 239 aa17.99■□□□□ 0.47
RPL28-209ENST00000560055 SMG7Q92540 1137 aaKnown RBP17.99■□□□□ 0.47
RPL28-209ENST00000560055 SYT15Q9BQS2 421 aa17.99■□□□□ 0.47
RPL28-209ENST00000560055 SNX25Q9H3E2 840 aa17.99■□□□□ 0.47
RPL28-209ENST00000560055 POMKQ9H5K3 350 aa17.99■□□□□ 0.47
RPL28-209ENST00000560055 EPHX3Q9H6B9 360 aa17.99■□□□□ 0.47
RPL28-209ENST00000560055 CRTAC1Q9NQ79 661 aa17.99■□□□□ 0.47
RPL28-209ENST00000560055 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.99■□□□□ 0.472e-7■■■■■ 33.6
RPL28-209ENST00000560055 PRKAG3Q9UGI9 489 aa17.99■□□□□ 0.47
RPL28-209ENST00000560055 RAPGEFL1Q9UHV5 662 aa17.99■□□□□ 0.47
RPL28-209ENST00000560055 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.99■□□□□ 0.47
RPL28-209ENST00000560055 MYBPHLA2RUH7 354 aa17.98■□□□□ 0.47
RPL28-209ENST00000560055 CCL16O15467 120 aa17.98■□□□□ 0.47
RPL28-209ENST00000560055 ATP2C2O75185 946 aa17.98■□□□□ 0.47
RPL28-209ENST00000560055 AFPP02771 609 aaKnown RBP17.98■□□□□ 0.47
RPL28-209ENST00000560055 ZP2Q05996 745 aa17.98■□□□□ 0.47
RPL28-209ENST00000560055 INCA1Q0VD86 236 aa17.98■□□□□ 0.47
RPL28-209ENST00000560055 CCDC150Q8NCX0 1101 aa17.98■□□□□ 0.47
RPL28-209ENST00000560055 OR6B3Q8NGW1 331 aa17.98■□□□□ 0.47
RPL28-209ENST00000560055 LMO3Q8TAP4 145 aa17.98■□□□□ 0.47
RPL28-209ENST00000560055 SPPL2BQ8TCT7 592 aa17.98■□□□□ 0.47
RPL28-209ENST00000560055 FUCA2Q9BTY2 467 aa17.98■□□□□ 0.47
RPL28-209ENST00000560055 PHF7Q9BWX1 381 aaPredicted RBP17.98■□□□□ 0.47
RPL28-209ENST00000560055 DNAJC25Q9H1X3 360 aa17.98■□□□□ 0.47
RPL28-209ENST00000560055 CYP3A43Q9HB55 503 aa17.98■□□□□ 0.47
RPL28-209ENST00000560055 WDR6Q9NNW5 1121 aaKnown RBP17.98■□□□□ 0.47
RPL28-209ENST00000560055 ABCB6Q9NP58 842 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms