RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 MYBPC2Q14324 1141 aa11.71□□□□□ -0.53
TRAF3-207ENST00000559734 ZNF174Q15697 407 aa11.71□□□□□ -0.53
TRAF3-207ENST00000559734 FBXO43Q4G163 708 aa11.71□□□□□ -0.53
TRAF3-207ENST00000559734 USP39Q53GS9 565 aaKnown RBP11.71□□□□□ -0.53
TRAF3-207ENST00000559734 PMS2CLQ68D20 193 aa11.71□□□□□ -0.53
TRAF3-207ENST00000559734 ANO7Q6IWH7 933 aa11.71□□□□□ -0.53
TRAF3-207ENST00000559734 ARMCX6Q7L4S7 300 aa11.71□□□□□ -0.53
TRAF3-207ENST00000559734 CPA6Q8N4T0 437 aa11.71□□□□□ -0.53
TRAF3-207ENST00000559734 USP13Q92995 863 aaPredicted RBP11.71□□□□□ -0.53
TRAF3-207ENST00000559734 TM6SF1Q9BZW5 370 aa11.71□□□□□ -0.53
TRAF3-207ENST00000559734 IL21Q9HBE4 155 aa11.71□□□□□ -0.53
TRAF3-207ENST00000559734 ARHGAP28Q9P2N2 729 aa11.71□□□□□ -0.53
TRAF3-207ENST00000559734 UBQLN1Q9UMX0 589 aaKnown RBP11.71□□□□□ -0.53
TRAF3-207ENST00000559734 NEUROG3Q9Y4Z2 214 aa11.71□□□□□ -0.53
TRAF3-207ENST00000559734 CEP295Q9C0D2 2601 aa11.71□□□□□ -0.54
TRAF3-207ENST00000559734 EML5Q05BV3 1969 aa11.7□□□□□ -0.54
TRAF3-207ENST00000559734 SPAARA0A1B0GVQ0 90 aa11.7□□□□□ -0.54
TRAF3-207ENST00000559734 PPEF2O14830 753 aa11.7□□□□□ -0.54
TRAF3-207ENST00000559734 SEC24BO95487 1268 aa11.7□□□□□ -0.54
TRAF3-207ENST00000559734 TYMPP19971 482 aa11.7□□□□□ -0.54
TRAF3-207ENST00000559734 WEE1P30291 646 aa11.7□□□□□ -0.54
TRAF3-207ENST00000559734 LRPAP1P30533 357 aa11.7□□□□□ -0.54
TRAF3-207ENST00000559734 GJA4P35212 333 aa11.7□□□□□ -0.54
TRAF3-207ENST00000559734 TUFMP49411 452 aaKnown RBP11.7□□□□□ -0.54
TRAF3-207ENST00000559734 SEC13P55735 322 aa11.7□□□□□ -0.54
TRAF3-207ENST00000559734 GUCY1B3Q02153 619 aa11.7□□□□□ -0.54
TRAF3-207ENST00000559734 C19orf48Q6RUI8 117 aa11.7□□□□□ -0.54
TRAF3-207ENST00000559734 C11orf74Q86VG3 221 aa11.7□□□□□ -0.54
TRAF3-207ENST00000559734 DAW1Q8N136 415 aa11.7□□□□□ -0.54
TRAF3-207ENST00000559734 STKLD1Q8NE28 680 aa11.7□□□□□ -0.54
TRAF3-207ENST00000559734 OR10T2Q8NGX3 314 aa11.7□□□□□ -0.54
TRAF3-207ENST00000559734 RIN3Q8TB24 985 aa11.7□□□□□ -0.54
TRAF3-207ENST00000559734 CD101Q93033 1021 aa11.7□□□□□ -0.54
TRAF3-207ENST00000559734 FAM212AQ96EL1 285 aa11.7□□□□□ -0.54
TRAF3-207ENST00000559734 BICD1Q96G01 975 aa11.7□□□□□ -0.54
TRAF3-207ENST00000559734 DRC1Q96MC2 740 aa11.7□□□□□ -0.54
TRAF3-207ENST00000559734 ABI2Q9NYB9 513 aaPredicted RBP11.7□□□□□ -0.54
TRAF3-207ENST00000559734 EBF1Q9UH73 591 aa11.7□□□□□ -0.54
TRAF3-207ENST00000559734 MAGED2Q9UNF1 606 aaPredicted RBP11.7□□□□□ -0.54
TRAF3-207ENST00000559734 IGF2RP11717 2491 aa11.7□□□□□ -0.54
TRAF3-207ENST00000559734 ATG2BQ96BY7 2078 aa11.69□□□□□ -0.54
TRAF3-207ENST00000559734 ATXN2Q99700 1313 aaKnown RBP11.69□□□□□ -0.54
TRAF3-207ENST00000559734 SFI1A8K8P3 1242 aa11.69□□□□□ -0.54
TRAF3-207ENST00000559734 E9PMD0 336 aa11.69□□□□□ -0.54
TRAF3-207ENST00000559734 CLDN3O15551 220 aa11.69□□□□□ -0.54
TRAF3-207ENST00000559734 XPOTO43592 962 aaKnown RBP11.69□□□□□ -0.54
TRAF3-207ENST00000559734 JAK2O60674 1132 aa11.69□□□□□ -0.54
TRAF3-207ENST00000559734 TOM1L1O75674 476 aa11.69□□□□□ -0.54
TRAF3-207ENST00000559734 IFNAR2P48551 515 aa11.69□□□□□ -0.54
TRAF3-207ENST00000559734 AARSP49588 968 aaKnown RBP eCLIP11.69□□□□□ -0.54
TRAF3-207ENST00000559734 SIM1P81133 766 aaPredicted RBP11.69□□□□□ -0.54
TRAF3-207ENST00000559734 RAD51AP2Q09MP3 1159 aa11.69□□□□□ -0.54
TRAF3-207ENST00000559734 PDGFRLQ15198 375 aa11.69□□□□□ -0.54
TRAF3-207ENST00000559734 TRIM61Q5EBN2 209 aa11.69□□□□□ -0.54
TRAF3-207ENST00000559734 TXNDC8Q6A555 127 aa11.69□□□□□ -0.54
TRAF3-207ENST00000559734 SNX29Q8TEQ0 813 aa11.69□□□□□ -0.54
TRAF3-207ENST00000559734 EZH1Q92800 747 aaPredicted RBP11.69□□□□□ -0.54
TRAF3-207ENST00000559734 SENP8Q96LD8 212 aa11.69□□□□□ -0.54
TRAF3-207ENST00000559734 RUSC1Q9BVN2 902 aa11.69□□□□□ -0.54
TRAF3-207ENST00000559734 NUSAP1Q9BXS6 441 aaKnown RBP11.69□□□□□ -0.54
TRAF3-207ENST00000559734 ECT2Q9H8V3 914 aa11.69□□□□□ -0.54
TRAF3-207ENST00000559734 KIF9Q9HAQ2 790 aa11.69□□□□□ -0.54
TRAF3-207ENST00000559734 TRPC7Q9HCX4 862 aa11.69□□□□□ -0.54
TRAF3-207ENST00000559734 TDP1Q9NUW8 608 aa11.69□□□□□ -0.54
TRAF3-207ENST00000559734 MSRB2Q9Y3D2 182 aa11.69□□□□□ -0.54
TRAF3-207ENST00000559734 RBM19Q9Y4C8 960 aaKnown RBP11.69□□□□□ -0.54
TRAF3-207ENST00000559734 CITO14578 2027 aa11.69□□□□□ -0.54
TRAF3-207ENST00000559734 ZFYVE26Q68DK2 2539 aa11.68□□□□□ -0.54
TRAF3-207ENST00000559734 LACTBL1A8MY62 500 aa11.68□□□□□ -0.54
TRAF3-207ENST00000559734 TAF4O00268 1085 aa11.68□□□□□ -0.54
TRAF3-207ENST00000559734 CLTAP09496 248 aa11.68□□□□□ -0.54
TRAF3-207ENST00000559734 MUTP22033 750 aa11.68□□□□□ -0.54
TRAF3-207ENST00000559734 TNFSF9P41273 254 aa11.68□□□□□ -0.54
TRAF3-207ENST00000559734 NLRP12P59046 1061 aa11.68□□□□□ -0.54
TRAF3-207ENST00000559734 LMAN2Q12907 356 aa11.68□□□□□ -0.54
TRAF3-207ENST00000559734 MTF1Q14872 753 aa11.68□□□□□ -0.54
TRAF3-207ENST00000559734 SAFBQ15424 915 aaKnown RBP eCLIP11.68□□□□□ -0.54
TRAF3-207ENST00000559734 C2orf27AQ580R0 203 aa11.68□□□□□ -0.54
TRAF3-207ENST00000559734 MRPS31Q92665 395 aaKnown RBP11.68□□□□□ -0.54
TRAF3-207ENST00000559734 PLEKHA5Q9HAU0 1116 aa11.68□□□□□ -0.54
TRAF3-207ENST00000559734 DUS2Q9NX74 493 aaKnown RBP11.68□□□□□ -0.54
TRAF3-207ENST00000559734 LRWD1Q9UFC0 647 aa11.68□□□□□ -0.54
TRAF3-207ENST00000559734 ZMYM5Q9UJ78 669 aa11.68□□□□□ -0.54
TRAF3-207ENST00000559734 TBX20Q9UMR3 447 aa11.68□□□□□ -0.54
TRAF3-207ENST00000559734 WNT6Q9Y6F9 365 aa11.68□□□□□ -0.54
TRAF3-207ENST00000559734 SPEGQ15772 3267 aa11.68□□□□□ -0.54
TRAF3-207ENST00000559734 TTC26A0AVF1 554 aa11.67□□□□□ -0.54
TRAF3-207ENST00000559734 MAP3K13O43283 966 aa11.67□□□□□ -0.54
TRAF3-207ENST00000559734 ZIC2O95409 532 aaPredicted RBP11.67□□□□□ -0.54
TRAF3-207ENST00000559734 CFIP05156 583 aa11.67□□□□□ -0.54
TRAF3-207ENST00000559734 ENGP17813 658 aa11.67□□□□□ -0.54
TRAF3-207ENST00000559734 CYP3A5P20815 502 aa11.67□□□□□ -0.54
TRAF3-207ENST00000559734 DDX6P26196 483 aaKnown RBP eCLIP11.67□□□□□ -0.54
TRAF3-207ENST00000559734 RDXP35241 583 aaKnown RBP11.67□□□□□ -0.54
TRAF3-207ENST00000559734 ATXN3P54252 364 aaPredicted RBP11.67□□□□□ -0.54
TRAF3-207ENST00000559734 MCL1Q07820 350 aa11.67□□□□□ -0.54
TRAF3-207ENST00000559734 MAPK7Q13164 816 aa11.67□□□□□ -0.54
TRAF3-207ENST00000559734 ZRSR1Q15695 479 aaKnown RBP11.67□□□□□ -0.54
TRAF3-207ENST00000559734 TTC38Q5R3I4 469 aa11.67□□□□□ -0.54
TRAF3-207ENST00000559734 SDHAF4Q5VUM1 108 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms