RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 ENGASEQ8NFI3 743 aa11.76□□□□□ -0.53
SPG11-216ENST00000559347 SPPL2BQ8TCT7 592 aa11.76□□□□□ -0.53
SPG11-216ENST00000559347 PLEKHO2Q8TD55 490 aa11.76□□□□□ -0.53
SPG11-216ENST00000559347 C2orf15Q8WU43 125 aaKnown RBP11.76□□□□□ -0.53
SPG11-216ENST00000559347 KBTBD7Q8WVZ9 684 aa11.76□□□□□ -0.53
SPG11-216ENST00000559347 PSMG2Q969U7 264 aa11.76□□□□□ -0.53
SPG11-216ENST00000559347 CCDC47Q96A33 483 aaKnown RBP11.76□□□□□ -0.53
SPG11-216ENST00000559347 CCDC127Q96BQ5 260 aa11.76□□□□□ -0.53
SPG11-216ENST00000559347 HPDLQ96IR7 371 aa11.76□□□□□ -0.53
SPG11-216ENST00000559347 PKMYT1Q99640 499 aa11.76□□□□□ -0.53
SPG11-216ENST00000559347 SEPT5Q99719 369 aaPredicted RBP11.76□□□□□ -0.53
SPG11-216ENST00000559347 KXD1Q9BQD3 176 aa11.76□□□□□ -0.53
SPG11-216ENST00000559347 RPP25Q9BUL9 199 aaKnown RBP11.76□□□□□ -0.53
SPG11-216ENST00000559347 LRRC3Q9BY71 257 aa11.76□□□□□ -0.53
SPG11-216ENST00000559347 KCNH6Q9H252 994 aa11.76□□□□□ -0.53
SPG11-216ENST00000559347 TMLHEQ9NVH6 421 aa11.76□□□□□ -0.53
SPG11-216ENST00000559347 DMAC2Q9NW81 257 aa11.76□□□□□ -0.53
SPG11-216ENST00000559347 DDX43Q9NXZ2 648 aaKnown RBP11.76□□□□□ -0.53
SPG11-216ENST00000559347 MYO16Q9Y6X6 1858 aa11.75□□□□□ -0.53
SPG11-216ENST00000559347 LRRIQ3A6PVS8 624 aaPredicted RBP11.75□□□□□ -0.53
SPG11-216ENST00000559347 ZNF197O14709 1029 aa11.75□□□□□ -0.53
SPG11-216ENST00000559347 GABRDO14764 452 aa11.75□□□□□ -0.53
SPG11-216ENST00000559347 HCRTO43612 131 aa11.75□□□□□ -0.53
SPG11-216ENST00000559347 KIF20AO95235 890 aa11.75□□□□□ -0.53
SPG11-216ENST00000559347 NR3C1P04150 777 aa11.75□□□□□ -0.53
SPG11-216ENST00000559347 MYL4P12829 197 aa11.75□□□□□ -0.53
SPG11-216ENST00000559347 ACAT1P24752 427 aaKnown RBP11.75□□□□□ -0.53
SPG11-216ENST00000559347 ALDH1A3P47895 512 aa11.75□□□□□ -0.53
SPG11-216ENST00000559347 CASP4P49662 377 aa11.75□□□□□ -0.53
SPG11-216ENST00000559347 CDR1P51861 262 aa11.75□□□□□ -0.53
SPG11-216ENST00000559347 EPHB3P54753 998 aa11.75□□□□□ -0.53
SPG11-216ENST00000559347 MYL7Q01449 175 aa11.75□□□□□ -0.53
SPG11-216ENST00000559347 TSPY1Q01534 308 aa11.75□□□□□ -0.53
SPG11-216ENST00000559347 FAM160A1Q05DH4 1040 aa11.75□□□□□ -0.53
SPG11-216ENST00000559347 PNOCQ13519 176 aa11.75□□□□□ -0.53
SPG11-216ENST00000559347 SNW1Q13573 536 aaKnown RBP11.75□□□□□ -0.53
SPG11-216ENST00000559347 CCDC142Q17RM4 750 aa11.75□□□□□ -0.53
SPG11-216ENST00000559347 SOWAHAQ2M3V2 549 aa11.75□□□□□ -0.53
SPG11-216ENST00000559347 MGAT5BQ3V5L5 792 aa11.75□□□□□ -0.53
SPG11-216ENST00000559347 INTS6LQ5JSJ4 861 aaKnown RBP11.75□□□□□ -0.53
SPG11-216ENST00000559347 CYP4A22Q5TCH4 519 aa11.75□□□□□ -0.53
SPG11-216ENST00000559347 DPH6Q7L8W6 267 aa11.75□□□□□ -0.53
SPG11-216ENST00000559347 DCP1BQ8IZD4 617 aaKnown RBP11.75□□□□□ -0.53
SPG11-216ENST00000559347 GUF1Q8N442 669 aaKnown RBP11.75□□□□□ -0.53
SPG11-216ENST00000559347 SHKBP1Q8TBC3 707 aa11.75□□□□□ -0.53
SPG11-216ENST00000559347 GPR152Q8TDT2 470 aa11.75□□□□□ -0.53
SPG11-216ENST00000559347 PARD3BQ8TEW8 1205 aa11.75□□□□□ -0.53
SPG11-216ENST00000559347 ZNF516Q92618 1163 aa11.75□□□□□ -0.53
SPG11-216ENST00000559347 MCRS1Q96EZ8 462 aa11.75□□□□□ -0.53
SPG11-216ENST00000559347 CCDC34Q96HJ3 373 aa11.75□□□□□ -0.53
SPG11-216ENST00000559347 LPIN3Q9BQK8 851 aa11.75□□□□□ -0.53
SPG11-216ENST00000559347 ACBD6Q9BR61 282 aa11.75□□□□□ -0.53
SPG11-216ENST00000559347 ZNF334Q9HCZ1 680 aaPredicted RBP11.75□□□□□ -0.53
SPG11-216ENST00000559347 SLC2A4RGQ9NR83 387 aa11.75□□□□□ -0.53
SPG11-216ENST00000559347 ABI2Q9NYB9 513 aaPredicted RBP11.75□□□□□ -0.53
SPG11-216ENST00000559347 WNT16Q9UBV4 365 aa11.75□□□□□ -0.53
SPG11-216ENST00000559347 FBXL21Q9UKT6 434 aa11.75□□□□□ -0.53
SPG11-216ENST00000559347 TRAF3IP3Q9Y228 551 aa11.75□□□□□ -0.53
SPG11-216ENST00000559347 R3HCC1Q9Y3T6 440 aaKnown RBP11.75□□□□□ -0.53
SPG11-216ENST00000559347 ASB3Q9Y575 518 aa11.75□□□□□ -0.53
SPG11-216ENST00000559347 USP34Q70CQ2 3546 aa11.74□□□□□ -0.53
SPG11-216ENST00000559347 DMDP11532 3685 aa11.74□□□□□ -0.53
SPG11-216ENST00000559347 A0A1W2PRU2 124 aa11.74□□□□□ -0.53
SPG11-216ENST00000559347 KRBA1A5PL33 1030 aa11.74□□□□□ -0.53
SPG11-216ENST00000559347 GOLGA6L4A6NEF3 574 aa11.74□□□□□ -0.53
SPG11-216ENST00000559347 CALUO43852 315 aaPredicted RBP11.74□□□□□ -0.53
SPG11-216ENST00000559347 ECI2O75521 394 aa11.74□□□□□ -0.53
SPG11-216ENST00000559347 STAU1O95793 577 aaKnown RBP11.74□□□□□ -0.53
SPG11-216ENST00000559347 CST3P01034 146 aaPredicted RBP11.74□□□□□ -0.53
SPG11-216ENST00000559347 GJA1P17302 382 aa11.74□□□□□ -0.53
SPG11-216ENST00000559347 NPR3P17342 541 aa11.74□□□□□ -0.53
SPG11-216ENST00000559347 PLA2G5P39877 138 aa11.74□□□□□ -0.53
SPG11-216ENST00000559347 LHX1P48742 406 aa11.74□□□□□ -0.53
SPG11-216ENST00000559347 TUFMP49411 452 aaKnown RBP11.74□□□□□ -0.53
SPG11-216ENST00000559347 CLDN10P78369 228 aa11.74□□□□□ -0.53
SPG11-216ENST00000559347 TEAD2Q15562 447 aa11.74□□□□□ -0.53
SPG11-216ENST00000559347 NFE2Q16621 373 aaPredicted RBP11.74□□□□□ -0.53
SPG11-216ENST00000559347 NFIL3Q16649 462 aa11.74□□□□□ -0.53
SPG11-216ENST00000559347 ZCWPW2Q504Y3 356 aa11.74□□□□□ -0.53
SPG11-216ENST00000559347 TDRD10Q5VZ19 366 aaKnown RBP11.74□□□□□ -0.53
SPG11-216ENST00000559347 ITIH5Q86UX2 942 aa11.74□□□□□ -0.53
SPG11-216ENST00000559347 SIX5Q8N196 739 aa11.74□□□□□ -0.53
SPG11-216ENST00000559347 PRSS33Q8NF86 280 aa11.74□□□□□ -0.53
SPG11-216ENST00000559347 ASB16Q96NS5 453 aa11.74□□□□□ -0.53
SPG11-216ENST00000559347 MFSD1Q9H3U5 465 aa11.74□□□□□ -0.53
SPG11-216ENST00000559347 ARHGEF3Q9NR81 526 aa11.74□□□□□ -0.53
SPG11-216ENST00000559347 CIZ1Q9ULV3 898 aaPredicted RBP11.74□□□□□ -0.53
SPG11-216ENST00000559347 MAPK8IP1Q9UQF2 711 aa11.74□□□□□ -0.53
SPG11-216ENST00000559347 PCDHB5Q9Y5E4 795 aa11.74□□□□□ -0.53
SPG11-216ENST00000559347 NCANO14594 1321 aa11.74□□□□□ -0.53
SPG11-216ENST00000559347 MYH10P35580 1976 aa11.74□□□□□ -0.53
SPG11-216ENST00000559347 HAPLN1P10915 354 aaPredicted RBP11.73□□□□□ -0.53
SPG11-216ENST00000559347 WARSP23381 471 aaKnown RBP11.73□□□□□ -0.53
SPG11-216ENST00000559347 NR2F2P24468 414 aa11.73□□□□□ -0.53
SPG11-216ENST00000559347 PCSK1P29120 753 aa11.73□□□□□ -0.53
SPG11-216ENST00000559347 AVPR2P30518 371 aa11.73□□□□□ -0.53
SPG11-216ENST00000559347 MYL6P60660 151 aa11.73□□□□□ -0.53
SPG11-216ENST00000559347 DLG4P78352 724 aa11.73□□□□□ -0.53
SPG11-216ENST00000559347 VEPH1Q14D04 833 aa11.73□□□□□ -0.53
SPG11-216ENST00000559347 FAM78AQ5JUQ0 283 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms