RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 EFCAB3Q8N7B9 438 aa4.69□□□□□ -1.66
SNX1-205ENST00000559339 ATAD1Q8NBU5 361 aa4.69□□□□□ -1.66
SNX1-205ENST00000559339 ZSWIM2Q8NEG5 633 aa4.69□□□□□ -1.66
SNX1-205ENST00000559339 ENGASEQ8NFI3 743 aa4.69□□□□□ -1.66
SNX1-205ENST00000559339 OR5B17Q8NGF7 314 aa4.69□□□□□ -1.66
SNX1-205ENST00000559339 TMC2Q8TDI7 906 aa4.69□□□□□ -1.66
SNX1-205ENST00000559339 PARD3BQ8TEW8 1205 aa4.69□□□□□ -1.66
SNX1-205ENST00000559339 TAF4BQ92750 862 aa4.69□□□□□ -1.66
SNX1-205ENST00000559339 FGF13Q92913 245 aa4.69□□□□□ -1.66
SNX1-205ENST00000559339 KHSRPQ92945 711 aaKnown RBP eCLIP4.69□□□□□ -1.66
SNX1-205ENST00000559339 PSMG2Q969U7 264 aa4.69□□□□□ -1.66
SNX1-205ENST00000559339 PBXIP1Q96AQ6 731 aa4.69□□□□□ -1.66
SNX1-205ENST00000559339 DCBLD2Q96PD2 775 aa4.69□□□□□ -1.66
SNX1-205ENST00000559339 GCNAQ96QF7 691 aa4.69□□□□□ -1.66
SNX1-205ENST00000559339 CGRRF1Q99675 332 aa4.69□□□□□ -1.66
SNX1-205ENST00000559339 GPR88Q9GZN0 384 aa4.69□□□□□ -1.66
SNX1-205ENST00000559339 ZCWPW1Q9H0M4 648 aa4.69□□□□□ -1.66
SNX1-205ENST00000559339 SNX25Q9H3E2 840 aa4.69□□□□□ -1.66
SNX1-205ENST00000559339 KCTD10Q9H3F6 313 aa4.69□□□□□ -1.66
SNX1-205ENST00000559339 SLITRK6Q9H5Y7 841 aa4.69□□□□□ -1.66
SNX1-205ENST00000559339 ABCB6Q9NP58 842 aa4.69□□□□□ -1.66
SNX1-205ENST00000559339 AVENQ9NQS1 362 aaPredicted RBP4.69□□□□□ -1.66
SNX1-205ENST00000559339 ABI2Q9NYB9 513 aaPredicted RBP4.69□□□□□ -1.66
SNX1-205ENST00000559339 EHD2Q9NZN4 543 aa4.69□□□□□ -1.66
SNX1-205ENST00000559339 DNMT3BQ9UBC3 853 aaKnown RBP4.69□□□□□ -1.66
SNX1-205ENST00000559339 NXF1Q9UBU9 619 aaKnown RBP4.69□□□□□ -1.66
SNX1-205ENST00000559339 CDH9Q9ULB4 789 aa4.69□□□□□ -1.66
SNX1-205ENST00000559339 SLC27A5Q9Y2P5 690 aa4.69□□□□□ -1.66
SNX1-205ENST00000559339 YIPF1Q9Y548 306 aa4.69□□□□□ -1.66
SNX1-205ENST00000559339 ASB3Q9Y575 518 aa4.69□□□□□ -1.66
SNX1-205ENST00000559339 PCDHB5Q9Y5E4 795 aa4.69□□□□□ -1.66
SNX1-205ENST00000559339 PCDHA5Q9Y5H7 936 aa4.69□□□□□ -1.66
SNX1-205ENST00000559339 BICDL2A1A5D9 508 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 MTMR11A4FU01 709 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 FAM86C2PA6NEL3 165 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 TMEM221A6NGB7 291 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 LRRIQ3A6PVS8 624 aaPredicted RBP4.68□□□□□ -1.66
SNX1-205ENST00000559339 A8MXQ7 604 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 M0R296 226 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 GABRDO14764 452 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 N4BP1O75113 896 aaKnown RBP4.68□□□□□ -1.66
SNX1-205ENST00000559339 TACC1O75410 805 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 GABBR2O75899 941 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 AKAP3O75969 853 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 SEC24AO95486 1093 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 FGFR1OPO95684 399 aaKnown RBP4.68□□□□□ -1.66
SNX1-205ENST00000559339 STAU1O95793 577 aaKnown RBP4.68□□□□□ -1.66
SNX1-205ENST00000559339 CST3P01034 146 aaPredicted RBP4.68□□□□□ -1.66
SNX1-205ENST00000559339 ASGR2P07307 311 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 CSH1P0DML2 217 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 CSH2P0DML3 217 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 SRFP11831 508 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 MYL4P12829 197 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 CDC25CP30307 473 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 GTF2H1P32780 548 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 GNL1P36915 607 aaPredicted RBP4.68□□□□□ -1.66
SNX1-205ENST00000559339 PRCPP42785 496 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 WNT7BP56706 349 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 MYL6P60660 151 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 CLDN10P78369 228 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 NTHL1P78549 312 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 ENPEPQ07075 957 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 CETN1Q12798 172 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 SOWAHAQ2M3V2 549 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 ZACNQ401N2 412 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 CFAP221Q4G0U5 840 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 COBLL1Q53SF7 1204 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 ZNF667Q5HYK9 610 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 INTS6LQ5JSJ4 861 aaKnown RBP4.68□□□□□ -1.66
SNX1-205ENST00000559339 BMP8AQ7Z5Y6 402 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 DNAJB7Q7Z6W7 309 aaPredicted RBP4.68□□□□□ -1.66
SNX1-205ENST00000559339 FAM186BQ8IYM0 893 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 SMYD4Q8IYR2 804 aaPredicted RBP4.68□□□□□ -1.66
SNX1-205ENST00000559339 TMEM130Q8N3G9 435 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 SLC44A3Q8N4M1 653 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 OR6B3Q8NGW1 331 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 OR10T2Q8NGX3 314 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 CXorf38Q8TB03 319 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 SPATA20Q8TB22 786 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 ITFG1Q8TB96 612 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 ING5Q8WYH8 240 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 E2F7Q96AV8 911 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 BORCS6Q96GS4 357 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 DHTKD1Q96HY7 919 aaPredicted RBP4.68□□□□□ -1.66
SNX1-205ENST00000559339 FUBP3Q96I24 572 aaKnown RBP eCLIP4.68□□□□□ -1.66
SNX1-205ENST00000559339 SHDQ96IW2 340 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 TNIP3Q96KP6 325 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 CEP295NLQ96MC4 621 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 GBP4Q96PP9 640 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 MYADMQ96S97 322 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 PRRX2Q99811 253 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 LRFN3Q9BTN0 628 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 MKNK1Q9BUB5 465 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 ATXN3LQ9H3M9 355 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 ZFP14Q9HCL3 533 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 DMAC2Q9NW81 257 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 HCFC1R1Q9NWW0 138 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 CEP72Q9P209 647 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 MAGEC2Q9UBF1 373 aaPredicted RBP4.68□□□□□ -1.66
SNX1-205ENST00000559339 UXTQ9UBK9 157 aaPredicted RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 192.1 ms