RNA–Protein interactions for RNA: ENST00000559329.5

USP8-208, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,917 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-208ENST00000559329 PPP1R7Q15435 360 aa16.86■□□□□ 0.29
USP8-208ENST00000559329 CCNG2Q16589 344 aa16.86■□□□□ 0.29
USP8-208ENST00000559329 TUBB8Q3ZCM7 444 aa16.86■□□□□ 0.29
USP8-208ENST00000559329 DNAJC21Q5F1R6 531 aaKnown RBP16.86■□□□□ 0.29
USP8-208ENST00000559329 MORN1Q5T089 497 aa16.86■□□□□ 0.29
USP8-208ENST00000559329 CYP4A22Q5TCH4 519 aa16.86■□□□□ 0.29
USP8-208ENST00000559329 RHBDF2Q6PJF5 856 aa16.86■□□□□ 0.29
USP8-208ENST00000559329 CCDC50Q8IVM0 306 aa16.86■□□□□ 0.29
USP8-208ENST00000559329 GRK7Q8WTQ7 553 aa16.86■□□□□ 0.29
USP8-208ENST00000559329 RNF25Q96BH1 459 aaPredicted RBP16.86■□□□□ 0.29
USP8-208ENST00000559329 HEMGNQ9BXL5 484 aa16.86■□□□□ 0.29
USP8-208ENST00000559329 FAM124BQ9H5Z6 455 aaPredicted RBP16.86■□□□□ 0.29
USP8-208ENST00000559329 LRRC4CQ9HCJ2 640 aa16.86■□□□□ 0.29
USP8-208ENST00000559329 RRN3P2A6NIE6 340 aa16.86■□□□□ 0.29
USP8-208ENST00000559329 F8VP50 259 aa16.86■□□□□ 0.29
USP8-208ENST00000559329 F2P00734 622 aa16.86■□□□□ 0.29
USP8-208ENST00000559329 CD19P15391 556 aa16.86■□□□□ 0.29
USP8-208ENST00000559329 PTPN7P35236 360 aa16.86■□□□□ 0.29
USP8-208ENST00000559329 NFX1Q12986 1120 aaKnown RBP16.86■□□□□ 0.29
USP8-208ENST00000559329 DCUN1D2Q6PH85 259 aa16.86■□□□□ 0.29
USP8-208ENST00000559329 RCOR2Q8IZ40 523 aa16.86■□□□□ 0.29
USP8-208ENST00000559329 ATL2Q8NHH9 583 aa16.86■□□□□ 0.29
USP8-208ENST00000559329 HPDLQ96IR7 371 aa16.86■□□□□ 0.29
USP8-208ENST00000559329 RBM41Q96IZ5 413 aaKnown RBP16.86■□□□□ 0.29
USP8-208ENST00000559329 ACAP3Q96P50 834 aa16.86■□□□□ 0.29
USP8-208ENST00000559329 SLITRK1Q96PX8 696 aa16.86■□□□□ 0.29
USP8-208ENST00000559329 SETD4Q9NVD3 440 aa16.86■□□□□ 0.29
USP8-208ENST00000559329 CALCOCO1Q9P1Z2 691 aa16.86■□□□□ 0.29
USP8-208ENST00000559329 GNEQ9Y223 722 aaKnown RBP16.86■□□□□ 0.29
USP8-208ENST00000559329 CITO14578 2027 aa16.86■□□□□ 0.29
USP8-208ENST00000559329 SIGLEC16A6NMB1 481 aa16.85■□□□□ 0.29
USP8-208ENST00000559329 IVLP07476 585 aa16.85■□□□□ 0.29
USP8-208ENST00000559329 RARGP13631 454 aa16.85■□□□□ 0.29
USP8-208ENST00000559329 HOXA11P31270 313 aaPredicted RBP16.85■□□□□ 0.29
USP8-208ENST00000559329 GNGT1P63211 74 aa16.85■□□□□ 0.29
USP8-208ENST00000559329 SLMAPQ14BN4 828 aa16.85■□□□□ 0.29
USP8-208ENST00000559329 DCAF4L1Q3SXM0 396 aa16.85■□□□□ 0.29
USP8-208ENST00000559329 ATP13A4Q4VNC1 1196 aa16.85■□□□□ 0.29
USP8-208ENST00000559329 TMEM176AQ96HP8 235 aa16.85■□□□□ 0.29
USP8-208ENST00000559329 ADPGKQ9BRR6 497 aa16.85■□□□□ 0.29
USP8-208ENST00000559329 TJP2Q9UDY2 1190 aa16.85■□□□□ 0.29
USP8-208ENST00000559329 FEZ2Q9UHY8 353 aaPredicted RBP16.85■□□□□ 0.29
USP8-208ENST00000559329 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.85■□□□□ 0.29
USP8-208ENST00000559329 KAT6AQ92794 2004 aa16.85■□□□□ 0.29
USP8-208ENST00000559329 MBLAC1A4D2B0 266 aaPredicted RBP16.84■□□□□ 0.29
USP8-208ENST00000559329 GPR32O75388 356 aa16.84■□□□□ 0.29
USP8-208ENST00000559329 GAS8O95995 478 aa16.84■□□□□ 0.29
USP8-208ENST00000559329 P4HA1P13674 534 aa16.84■□□□□ 0.29
USP8-208ENST00000559329 ITIH2P19823 946 aa16.84■□□□□ 0.29
USP8-208ENST00000559329 SSR1P43307 286 aaKnown RBP16.84■□□□□ 0.29
USP8-208ENST00000559329 ATP1A2P50993 1020 aa16.84■□□□□ 0.29
USP8-208ENST00000559329 ADCY2Q08462 1091 aa16.84■□□□□ 0.29
USP8-208ENST00000559329 ORC1Q13415 861 aa16.84■□□□□ 0.29
USP8-208ENST00000559329 FNIP1Q8TF40 1166 aa16.84■□□□□ 0.29
USP8-208ENST00000559329 KAT2BQ92831 832 aa16.84■□□□□ 0.29
USP8-208ENST00000559329 SCLT1Q96NL6 688 aa16.84■□□□□ 0.29
USP8-208ENST00000559329 CPXM1Q96SM3 734 aa16.84■□□□□ 0.29
USP8-208ENST00000559329 AAASQ9NRG9 546 aa16.84■□□□□ 0.29
USP8-208ENST00000559329 AGAP1Q9UPQ3 857 aa16.84■□□□□ 0.29
USP8-208ENST00000559329 SHBGP04278 402 aa16.84■□□□□ 0.29
USP8-208ENST00000559329 FGFR4P22455 802 aa16.84■□□□□ 0.29
USP8-208ENST00000559329 GJC1P36383 396 aa16.84■□□□□ 0.29
USP8-208ENST00000559329 GABRB2P47870 512 aa16.84■□□□□ 0.29
USP8-208ENST00000559329 COPS2P61201 443 aa16.84■□□□□ 0.29
USP8-208ENST00000559329 RBP5P82980 135 aa16.84■□□□□ 0.29
USP8-208ENST00000559329 CALCOCO2Q13137 446 aa16.84■□□□□ 0.29
USP8-208ENST00000559329 PDCLQ13371 301 aa16.84■□□□□ 0.29
USP8-208ENST00000559329 KIZQ2M2Z5 673 aa16.84■□□□□ 0.29
USP8-208ENST00000559329 UBAP2Q5T6F2 1119 aaKnown RBP16.84■□□□□ 0.29
USP8-208ENST00000559329 DENND2CQ68D51 928 aa16.84■□□□□ 0.29
USP8-208ENST00000559329 TXNRD3NBQ6F5E7 133 aa16.84■□□□□ 0.29
USP8-208ENST00000559329 MFSD7Q6UXD7 560 aa16.84■□□□□ 0.29
USP8-208ENST00000559329 POLNQ7Z5Q5 900 aa16.84■□□□□ 0.29
USP8-208ENST00000559329 XYLT1Q86Y38 959 aa16.84■□□□□ 0.29
USP8-208ENST00000559329 SNF8Q96H20 258 aa16.84■□□□□ 0.29
USP8-208ENST00000559329 SEMA4AQ9H3S1 761 aa16.84■□□□□ 0.29
USP8-208ENST00000559329 KLHL11Q9NVR0 708 aa16.84■□□□□ 0.29
USP8-208ENST00000559329 DPP3Q9NY33 737 aa16.84■□□□□ 0.29
USP8-208ENST00000559329 SLC5A4Q9NY91 659 aa16.84■□□□□ 0.29
USP8-208ENST00000559329 WDR35Q9P2L0 1181 aa16.84■□□□□ 0.29
USP8-208ENST00000559329 NRCAMQ92823 1304 aa16.83■□□□□ 0.29
USP8-208ENST00000559329 MICAL2O94851 1124 aa16.83■□□□□ 0.28
USP8-208ENST00000559329 HMGCRP04035 888 aa16.83■□□□□ 0.28
USP8-208ENST00000559329 KRT1P04264 644 aa16.83■□□□□ 0.28
USP8-208ENST00000559329 ERBB2P04626 1255 aa16.83■□□□□ 0.28
USP8-208ENST00000559329 SMIM10L2AP0DMW4 78 aa16.83■□□□□ 0.28
USP8-208ENST00000559329 SMIM10L2BP0DMW5 78 aa16.83■□□□□ 0.28
USP8-208ENST00000559329 VDRP11473 427 aa16.83■□□□□ 0.28
USP8-208ENST00000559329 RFC1P35251 1148 aaPredicted RBP16.83■□□□□ 0.28
USP8-208ENST00000559329 MAP2K5Q13163 448 aa16.83■□□□□ 0.28
USP8-208ENST00000559329 CNGA2Q16280 664 aa16.83■□□□□ 0.28
USP8-208ENST00000559329 KRT71Q3SY84 523 aa16.83■□□□□ 0.28
USP8-208ENST00000559329 DRICH1Q6PGQ1 229 aaPredicted RBP16.83■□□□□ 0.28
USP8-208ENST00000559329 FOXR1Q6PIV2 292 aa16.83■□□□□ 0.28
USP8-208ENST00000559329 SPOCD1Q6ZMY3 1216 aa16.83■□□□□ 0.28
USP8-208ENST00000559329 JOSD2Q8TAC2 188 aa16.83■□□□□ 0.28
USP8-208ENST00000559329 TLCD1Q96CP7 247 aa16.83■□□□□ 0.28
USP8-208ENST00000559329 TMEM109Q9BVC6 243 aa16.83■□□□□ 0.28
USP8-208ENST00000559329 PLEKHA5Q9HAU0 1116 aa16.83■□□□□ 0.28
USP8-208ENST00000559329 DDX56Q9NY93 547 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms