RNA–Protein interactions for RNA: ENST00000559321.1

LINC02253-201, Transcript of long intergenic non-protein coding RNA 2253, humanhuman

TSL 2 BASIC

Gene LINC02253, Length 448 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02253-201ENST00000559321 PCDHB4Q9Y5E5 795 aa3.1□□□□□ -1.91
LINC02253-201ENST00000559321 LYVE1Q9Y5Y7 322 aa3.1□□□□□ -1.91
LINC02253-201ENST00000559321 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.09□□□□□ -1.91
LINC02253-201ENST00000559321 A0A1W2PR48 441 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 PRAMEF22A3QJZ6 481 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 EFCAB8A8MWE9 144 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 PRR33A8MZF0 331 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 H3BNC9 293 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 F2RL2O00254 374 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 PSMA7O14818 248 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 PCDH17O14917 1159 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 GRM6O15303 877 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 SLC7A4O43246 635 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 TEX33O43247 280 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 FKTNO75072 461 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 COBLO75128 1261 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 GUCY1B2O75343 617 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 MATN4O95460 622 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 MPIG6BO95866 241 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 IGHDP01880 384 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 CLTBP09497 229 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 LTA4HP09960 611 aaKnown RBP3.09□□□□□ -1.91
LINC02253-201ENST00000559321 FAM87AP0C7U9 286 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 THEGLP0DJG4 465 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 FAHP16930 419 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 FUT4P22083 530 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 APEX1P27695 318 aaKnown RBP3.09□□□□□ -1.91
LINC02253-201ENST00000559321 LTKP29376 864 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 GUCY1A2P33402 732 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 GRK5P34947 590 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 BSGP35613 385 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 ATP6V1E1P36543 226 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 HNF4AP41235 474 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 KCNC1P48547 511 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 AFF3P51826 1226 aaKnown RBP3.09□□□□□ -1.91
LINC02253-201ENST00000559321 RAD23AP54725 363 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 MLLT6P55198 1093 aaPredicted RBP3.09□□□□□ -1.91
LINC02253-201ENST00000559321 WNT3AP56704 352 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 CTXN1P60606 82 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 MXRA7P84157 204 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 UBXN1Q04323 297 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 SRSF11Q05519 484 aaKnown RBP3.09□□□□□ -1.91
LINC02253-201ENST00000559321 MAP3K12Q12852 859 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 PPP2R5CQ13362 524 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 NFIXQ14938 502 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 NOLC1Q14978 699 aaKnown RBP eCLIP3.09□□□□□ -1.91
LINC02253-201ENST00000559321 SEC23BQ15437 767 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 KYNUQ16719 465 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 ATP2B3Q16720 1220 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 NRN1LQ496H8 165 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 DNAJC21Q5F1R6 531 aaKnown RBP3.09□□□□□ -1.91
LINC02253-201ENST00000559321 PRAMEF14Q5SWL7 426 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 ZNF362Q5T0B9 420 aaPredicted RBP3.09□□□□□ -1.91
LINC02253-201ENST00000559321 PRAMEF18Q5VWM3 479 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 KLHL24Q6TFL4 600 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 MFSD6Q6ZSS7 791 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 SZRD1Q7Z422 152 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 SLFN11Q7Z7L1 901 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.09□□□□□ -1.91
LINC02253-201ENST00000559321 SLCO6A1Q86UG4 719 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 EPHX4Q8IUS5 362 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 UNC45BQ8IWX7 931 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 DIS3L2Q8IYB7 885 aaKnown RBP3.09□□□□□ -1.91
LINC02253-201ENST00000559321 THNSL1Q8IYQ7 743 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 ULK2Q8IYT8 1036 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 DZIP1LQ8IYY4 767 aaKnown RBP3.09□□□□□ -1.91
LINC02253-201ENST00000559321 RTKN2Q8IZC4 609 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 OR8H3Q8N146 312 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 CARNMT1Q8N4J0 409 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 SRBD1Q8N5C6 995 aaKnown RBP3.09□□□□□ -1.91
LINC02253-201ENST00000559321 CELF5Q8N6W0 485 aaKnown RBP3.09□□□□□ -1.91
LINC02253-201ENST00000559321 DCBLD1Q8N8Z6 715 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 OR1N1Q8NGS0 311 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 FBLIM1Q8WUP2 373 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 ZNF480Q8WV37 535 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 EDARADDQ8WWZ3 215 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 CLEC4DQ8WXI8 215 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 CPT1BQ92523 772 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 CUL5Q93034 780 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 SNX21Q969T3 373 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 SPSB4Q96A44 273 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 ZNF653Q96CK0 615 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 CALML4Q96GE6 196 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 TOE1Q96GM8 510 aaKnown RBP3.09□□□□□ -1.91
LINC02253-201ENST00000559321 HEXIM2Q96MH2 286 aaKnown RBP3.09□□□□□ -1.91
LINC02253-201ENST00000559321 TRAPPC9Q96Q05 1148 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 ITPAQ9BY32 194 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 AP5M1Q9H0R1 490 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 FAM83DQ9H4H8 585 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 GRPEL1Q9HAV7 217 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 LANCL2Q9NS86 450 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 PPP1R14DQ9NXH3 145 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 GALNT8Q9NY28 637 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 LPAR3Q9UBY5 353 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 XPO7Q9UIA9 1087 aaKnown RBP3.09□□□□□ -1.91
LINC02253-201ENST00000559321 NFU1Q9UMS0 254 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 PCDHA1Q9Y5I3 950 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 IRS2Q9Y4H2 1338 aa3.09□□□□□ -1.91
LINC02253-201ENST00000559321 KRTAP4-8A0A0G2JLE6 195 aa3.08□□□□□ -1.92
LINC02253-201ENST00000559321 FAM95CA0A1B0GW59 222 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms