RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 GDPD5Q8WTR4 605 aa15.82■□□□□ 0.12
SNRPA1-207ENST00000559309 ZCWPW1Q9H0M4 648 aa15.82■□□□□ 0.12
SNRPA1-207ENST00000559309 CERS4Q9HA82 394 aa15.82■□□□□ 0.12
SNRPA1-207ENST00000559309 UBE2TQ9NPD8 197 aaPredicted RBP15.82■□□□□ 0.12
SNRPA1-207ENST00000559309 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.82■□□□□ 0.123e-8■■■■■ 45.9
SNRPA1-207ENST00000559309 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.82■□□□□ 0.12
SNRPA1-207ENST00000559309 FAM207AQ9NSI2 230 aaPredicted RBP15.82■□□□□ 0.12
SNRPA1-207ENST00000559309 HMGXB4Q9UGU5 601 aa15.82■□□□□ 0.12
SNRPA1-207ENST00000559309 SSX2IPQ9Y2D8 614 aa15.82■□□□□ 0.12
SNRPA1-207ENST00000559309 GOLGA6L3A6NEY3 463 aa15.81■□□□□ 0.12
SNRPA1-207ENST00000559309 OR6C75A6NL08 312 aa15.81■□□□□ 0.12
SNRPA1-207ENST00000559309 HIDE1A8MVS5 230 aa15.81■□□□□ 0.12
SNRPA1-207ENST00000559309 F8VZ95 297 aa15.81■□□□□ 0.12
SNRPA1-207ENST00000559309 H7C4K7 107 aa15.81■□□□□ 0.12
SNRPA1-207ENST00000559309 HCRTO43612 131 aa15.81■□□□□ 0.12
SNRPA1-207ENST00000559309 ABLIM3O94929 683 aa15.81■□□□□ 0.12
SNRPA1-207ENST00000559309 VNN2O95498 520 aa15.81■□□□□ 0.12
SNRPA1-207ENST00000559309 GYPCP04921 128 aa15.81■□□□□ 0.12
SNRPA1-207ENST00000559309 PLXNA3P51805 1871 aa15.81■□□□□ 0.12
SNRPA1-207ENST00000559309 NDST1P52848 882 aa15.81■□□□□ 0.12
SNRPA1-207ENST00000559309 RAD23BP54727 409 aa15.81■□□□□ 0.12
SNRPA1-207ENST00000559309 MFAP3P55082 362 aa15.81■□□□□ 0.12
SNRPA1-207ENST00000559309 KCNC3Q14003 757 aa15.81■□□□□ 0.12
SNRPA1-207ENST00000559309 GSE1Q14687 1217 aa15.81■□□□□ 0.12
SNRPA1-207ENST00000559309 GRIN2CQ14957 1233 aa15.81■□□□□ 0.12
SNRPA1-207ENST00000559309 PSMD5Q16401 504 aa15.81■□□□□ 0.12
SNRPA1-207ENST00000559309 SPECC1LQ69YQ0 1117 aa15.81■□□□□ 0.12
SNRPA1-207ENST00000559309 ZNF280DQ6N043 979 aa15.81■□□□□ 0.12
SNRPA1-207ENST00000559309 LILRA6Q6PI73 481 aa15.81■□□□□ 0.12
SNRPA1-207ENST00000559309 PRSS55Q6UWB4 352 aaPredicted RBP15.81■□□□□ 0.12
SNRPA1-207ENST00000559309 SCARA5Q6ZMJ2 495 aa15.81■□□□□ 0.12
SNRPA1-207ENST00000559309 SLC4A11Q8NBS3 891 aa15.81■□□□□ 0.12
SNRPA1-207ENST00000559309 NEK11Q8NG66 645 aa15.81■□□□□ 0.12
SNRPA1-207ENST00000559309 RIN2Q8WYP3 895 aaPredicted RBP15.81■□□□□ 0.12
SNRPA1-207ENST00000559309 MRPL38Q96DV4 380 aaKnown RBP15.81■□□□□ 0.12
SNRPA1-207ENST00000559309 MMS19Q96T76 1030 aa15.81■□□□□ 0.12
SNRPA1-207ENST00000559309 TCF25Q9BQ70 676 aa15.81■□□□□ 0.12
SNRPA1-207ENST00000559309 NUP58Q9BVL2 599 aa15.81■□□□□ 0.12
SNRPA1-207ENST00000559309 TRIM5Q9C035 493 aa15.81■□□□□ 0.12
SNRPA1-207ENST00000559309 ELOVL4Q9GZR5 314 aa15.81■□□□□ 0.12
SNRPA1-207ENST00000559309 DDX43Q9NXZ2 648 aaKnown RBP15.81■□□□□ 0.12
SNRPA1-207ENST00000559309 RFXAPO00287 272 aa15.8■□□□□ 0.12
SNRPA1-207ENST00000559309 TULP1O00294 542 aaPredicted RBP15.8■□□□□ 0.12
SNRPA1-207ENST00000559309 FOXN3O00409 490 aaPredicted RBP15.8■□□□□ 0.12
SNRPA1-207ENST00000559309 ADAM12O43184 909 aa15.8■□□□□ 0.12
SNRPA1-207ENST00000559309 URODP06132 367 aa15.8■□□□□ 0.12
SNRPA1-207ENST00000559309 CNPP09543 421 aaKnown RBP15.8■□□□□ 0.12
SNRPA1-207ENST00000559309 GNL1P36915 607 aaPredicted RBP15.8■□□□□ 0.12
SNRPA1-207ENST00000559309 POLR2FP61218 127 aaKnown RBP15.8■□□□□ 0.12
SNRPA1-207ENST00000559309 CREMQ03060 361 aa15.8■□□□□ 0.12
SNRPA1-207ENST00000559309 GPR17Q13304 367 aa15.8■□□□□ 0.12
SNRPA1-207ENST00000559309 RAB33AQ14088 237 aa15.8■□□□□ 0.12
SNRPA1-207ENST00000559309 SMC1AQ14683 1233 aaKnown RBP15.8■□□□□ 0.12
SNRPA1-207ENST00000559309 COL19A1Q14993 1142 aa15.8■□□□□ 0.12
SNRPA1-207ENST00000559309 INTS6LQ5JSJ4 861 aaKnown RBP15.8■□□□□ 0.12
SNRPA1-207ENST00000559309 LRRTM3Q86VH5 581 aa15.8■□□□□ 0.12
SNRPA1-207ENST00000559309 METTL23Q86XA0 190 aa15.8■□□□□ 0.12
SNRPA1-207ENST00000559309 OLIG1Q8TAK6 271 aa15.8■□□□□ 0.12
SNRPA1-207ENST00000559309 MYLIPQ8WY64 445 aa15.8■□□□□ 0.12
SNRPA1-207ENST00000559309 KLHL5Q96PQ7 755 aa15.8■□□□□ 0.12
SNRPA1-207ENST00000559309 CRTAC1Q9NQ79 661 aa15.8■□□□□ 0.12
SNRPA1-207ENST00000559309 MRPL17Q9NRX2 175 aaKnown RBP15.8■□□□□ 0.12
SNRPA1-207ENST00000559309 CDH9Q9ULB4 789 aa15.8■□□□□ 0.12
SNRPA1-207ENST00000559309 CAPN11Q9UMQ6 739 aa15.8■□□□□ 0.12
SNRPA1-207ENST00000559309 REV3LO60673 3130 aa15.8■□□□□ 0.12
SNRPA1-207ENST00000559309 MTCL1Q9Y4B5 1905 aaKnown RBP15.8■□□□□ 0.12
SNRPA1-207ENST00000559309 TEX28O15482 410 aa15.79■□□□□ 0.12
SNRPA1-207ENST00000559309 CXCL14O95715 111 aa15.79■□□□□ 0.12
SNRPA1-207ENST00000559309 PAEPP09466 180 aa15.79■□□□□ 0.12
SNRPA1-207ENST00000559309 PCSK1P29120 753 aa15.79■□□□□ 0.12
SNRPA1-207ENST00000559309 HNRNPH3P31942 346 aaKnown RBP15.79■□□□□ 0.12
SNRPA1-207ENST00000559309 CLCN1P35523 988 aa15.79■□□□□ 0.12
SNRPA1-207ENST00000559309 NDUFV1P49821 464 aa15.79■□□□□ 0.12
SNRPA1-207ENST00000559309 YWHAEP62258 255 aaKnown RBP15.79■□□□□ 0.12
SNRPA1-207ENST00000559309 ADGRE1Q14246 886 aa15.79■□□□□ 0.12
SNRPA1-207ENST00000559309 DRAP1Q14919 205 aaPredicted RBP15.79■□□□□ 0.12
SNRPA1-207ENST00000559309 PAQR9Q6ZVX9 377 aa15.79■□□□□ 0.12
SNRPA1-207ENST00000559309 AUTS2Q8WXX7 1259 aa15.79■□□□□ 0.12
SNRPA1-207ENST00000559309 TMEM209Q96SK2 561 aa15.79■□□□□ 0.12
SNRPA1-207ENST00000559309 ZSWIM1Q9BR11 485 aa15.79■□□□□ 0.12
SNRPA1-207ENST00000559309 SYT11Q9BT88 431 aa15.79■□□□□ 0.12
SNRPA1-207ENST00000559309 NT5C1AQ9BXI3 368 aa15.79■□□□□ 0.12
SNRPA1-207ENST00000559309 DPEP3Q9H4B8 488 aa15.79■□□□□ 0.12
SNRPA1-207ENST00000559309 HSFX1Q9UBD0 423 aa15.79■□□□□ 0.12
SNRPA1-207ENST00000559309 PCDHGC5Q9Y5F6 944 aa15.79■□□□□ 0.12
SNRPA1-207ENST00000559309 WDR27A2RRH5 827 aa15.78■□□□□ 0.12
SNRPA1-207ENST00000559309 MYBPHLA2RUH7 354 aa15.78■□□□□ 0.12
SNRPA1-207ENST00000559309 A8MXQ7 604 aa15.78■□□□□ 0.12
SNRPA1-207ENST00000559309 ADCY5O95622 1261 aa15.78■□□□□ 0.12
SNRPA1-207ENST00000559309 PTPN1P18031 435 aaKnown RBP15.78■□□□□ 0.12
SNRPA1-207ENST00000559309 CD58P19256 250 aa15.78■□□□□ 0.12
SNRPA1-207ENST00000559309 MRE11P49959 708 aa15.78■□□□□ 0.12
SNRPA1-207ENST00000559309 ROR1Q01973 937 aa15.78■□□□□ 0.12
SNRPA1-207ENST00000559309 SMARCB1Q12824 385 aa15.78■□□□□ 0.12
SNRPA1-207ENST00000559309 MEA1Q16626 185 aa15.78■□□□□ 0.12
SNRPA1-207ENST00000559309 CCDC142Q17RM4 750 aa15.78■□□□□ 0.12
SNRPA1-207ENST00000559309 CTXN3Q4LDR2 81 aa15.78■□□□□ 0.12
SNRPA1-207ENST00000559309 ARHGAP17Q68EM7 881 aa15.78■□□□□ 0.12
SNRPA1-207ENST00000559309 TMC7Q7Z402 723 aa15.78■□□□□ 0.12
SNRPA1-207ENST00000559309 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms