RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 VWA3AA6NCI4 1184 aa17.59■□□□□ 0.41
CDC42BPB-205ENST00000559245 PIRO00625 290 aa17.59■□□□□ 0.41
CDC42BPB-205ENST00000559245 RPP40O75818 363 aaKnown RBP17.59■□□□□ 0.41
CDC42BPB-205ENST00000559245 EPN2O95208 641 aa17.59■□□□□ 0.41
CDC42BPB-205ENST00000559245 NFICP08651 508 aa17.59■□□□□ 0.41
CDC42BPB-205ENST00000559245 ZNF806P0C7X5 589 aa17.59■□□□□ 0.41
CDC42BPB-205ENST00000559245 CCDC6Q16204 474 aa17.59■□□□□ 0.41
CDC42BPB-205ENST00000559245 TAF12Q16514 161 aa17.59■□□□□ 0.41
CDC42BPB-205ENST00000559245 TMEM119Q4V9L6 283 aa17.59■□□□□ 0.41
CDC42BPB-205ENST00000559245 TMEM196Q5HYL7 178 aa17.59■□□□□ 0.41
CDC42BPB-205ENST00000559245 CACNA2D4Q7Z3S7 1137 aa17.59■□□□□ 0.41
CDC42BPB-205ENST00000559245 GIPC2Q8TF65 315 aa17.59■□□□□ 0.41
CDC42BPB-205ENST00000559245 REEP2Q9BRK0 252 aa17.59■□□□□ 0.41
CDC42BPB-205ENST00000559245 MSTO1Q9BUK6 570 aa17.59■□□□□ 0.41
CDC42BPB-205ENST00000559245 ZCWPW1Q9H0M4 648 aa17.59■□□□□ 0.41
CDC42BPB-205ENST00000559245 CPSF3Q9UKF6 684 aaKnown RBP17.59■□□□□ 0.41
CDC42BPB-205ENST00000559245 ODF2LQ9ULJ1 636 aa17.59■□□□□ 0.41
CDC42BPB-205ENST00000559245 CFAP47Q6ZTR5 3102 aa17.59■□□□□ 0.41
CDC42BPB-205ENST00000559245 A0A0B4J269 797 aa17.58■□□□□ 0.4
CDC42BPB-205ENST00000559245 CCDC163A0A0D9SF12 145 aa17.58■□□□□ 0.4
CDC42BPB-205ENST00000559245 ANO9A1A5B4 782 aa17.58■□□□□ 0.4
CDC42BPB-205ENST00000559245 K7ENM7 598 aa17.58■□□□□ 0.4
CDC42BPB-205ENST00000559245 RAP1GAPP47736 663 aa17.58■□□□□ 0.4
CDC42BPB-205ENST00000559245 TMEM132DQ14C87 1099 aa17.58■□□□□ 0.4
CDC42BPB-205ENST00000559245 RILPL1Q5EBL4 403 aa17.58■□□□□ 0.4
CDC42BPB-205ENST00000559245 MCTP1Q6DN14 999 aa17.58■□□□□ 0.4
CDC42BPB-205ENST00000559245 FSTL4Q6MZW2 842 aa17.58■□□□□ 0.4
CDC42BPB-205ENST00000559245 SLC39A4Q6P5W5 647 aa17.58■□□□□ 0.4
CDC42BPB-205ENST00000559245 KBTBD6Q86V97 674 aa17.58■□□□□ 0.4
CDC42BPB-205ENST00000559245 CMTM8Q8IZV2 173 aa17.58■□□□□ 0.4
CDC42BPB-205ENST00000559245 MYCT1Q8N699 235 aa17.58■□□□□ 0.4
CDC42BPB-205ENST00000559245 FAM83CQ9BQN1 747 aa17.58■□□□□ 0.4
CDC42BPB-205ENST00000559245 HPS4Q9NQG7 708 aa17.58■□□□□ 0.4
CDC42BPB-205ENST00000559245 RXFP3Q9NSD7 469 aa17.58■□□□□ 0.4
CDC42BPB-205ENST00000559245 ZMYM5Q9UJ78 669 aa17.58■□□□□ 0.4
CDC42BPB-205ENST00000559245 ANGPTL2Q9UKU9 493 aa17.58■□□□□ 0.4
CDC42BPB-205ENST00000559245 DSEQ9UL01 958 aa17.58■□□□□ 0.4
CDC42BPB-205ENST00000559245 CEP295Q9C0D2 2601 aa17.57■□□□□ 0.4
CDC42BPB-205ENST00000559245 LAMA1P25391 3075 aa17.57■□□□□ 0.4
CDC42BPB-205ENST00000559245 HELZP42694 1942 aaKnown RBP17.57■□□□□ 0.4
CDC42BPB-205ENST00000559245 TM4SF5O14894 197 aa17.57■□□□□ 0.4
CDC42BPB-205ENST00000559245 ATG13O75143 517 aa17.57■□□□□ 0.4
CDC42BPB-205ENST00000559245 FAM13AO94988 1023 aa17.57■□□□□ 0.4
CDC42BPB-205ENST00000559245 CCDC192P0DO97 292 aa17.57■□□□□ 0.4
CDC42BPB-205ENST00000559245 SCP2P22307 547 aa17.57■□□□□ 0.4
CDC42BPB-205ENST00000559245 GRSF1Q12849 480 aaKnown RBP eCLIP17.57■□□□□ 0.4
CDC42BPB-205ENST00000559245 RUNX3Q13761 415 aa17.57■□□□□ 0.4
CDC42BPB-205ENST00000559245 N4BP2L1Q5TBK1 243 aaPredicted RBP17.57■□□□□ 0.4
CDC42BPB-205ENST00000559245 TRIM68Q6AZZ1 485 aa17.57■□□□□ 0.4
CDC42BPB-205ENST00000559245 LRRTM3Q86VH5 581 aa17.57■□□□□ 0.4
CDC42BPB-205ENST00000559245 GPBP1Q86WP2 473 aa17.57■□□□□ 0.4
CDC42BPB-205ENST00000559245 METTL23Q86XA0 190 aa17.57■□□□□ 0.4
CDC42BPB-205ENST00000559245 THEM5Q8N1Q8 247 aa17.57■□□□□ 0.4
CDC42BPB-205ENST00000559245 SPPL2BQ8TCT7 592 aa17.57■□□□□ 0.4
CDC42BPB-205ENST00000559245 C2orf15Q8WU43 125 aaKnown RBP17.57■□□□□ 0.4
CDC42BPB-205ENST00000559245 CHFRQ96EP1 664 aa17.57■□□□□ 0.4
CDC42BPB-205ENST00000559245 EBF3Q9H4W6 596 aa17.57■□□□□ 0.4
CDC42BPB-205ENST00000559245 SLC8A2Q9UPR5 921 aa17.57■□□□□ 0.4
CDC42BPB-205ENST00000559245 CCL26Q9Y258 94 aa17.57■□□□□ 0.4
CDC42BPB-205ENST00000559245 DERAQ9Y315 318 aa17.57■□□□□ 0.4
CDC42BPB-205ENST00000559245 ABCA7Q8IZY2 2146 aa17.57■□□□□ 0.4
CDC42BPB-205ENST00000559245 THADAQ6YHU6 1953 aa17.57■□□□□ 0.4
CDC42BPB-205ENST00000559245 OTOL1A6NHN0 477 aaPredicted RBP17.56■□□□□ 0.4
CDC42BPB-205ENST00000559245 CYB561D2O14569 222 aa17.56■□□□□ 0.4
CDC42BPB-205ENST00000559245 TRDMT1O14717 391 aaKnown RBP17.56■□□□□ 0.4
CDC42BPB-205ENST00000559245 HAPLN1P10915 354 aaPredicted RBP17.56■□□□□ 0.4
CDC42BPB-205ENST00000559245 PMLP29590 882 aa17.56■□□□□ 0.4
CDC42BPB-205ENST00000559245 NMT1P30419 496 aaKnown RBP17.56■□□□□ 0.4
CDC42BPB-205ENST00000559245 AVPR1AP37288 418 aa17.56■□□□□ 0.4
CDC42BPB-205ENST00000559245 ACOT2P49753 483 aa17.56■□□□□ 0.4
CDC42BPB-205ENST00000559245 TAF6P49848 677 aa17.56■□□□□ 0.4
CDC42BPB-205ENST00000559245 SMARCB1Q12824 385 aa17.56■□□□□ 0.4
CDC42BPB-205ENST00000559245 DHX8Q14562 1220 aaKnown RBP17.56■□□□□ 0.4
CDC42BPB-205ENST00000559245 STPG1Q5TH74 334 aa17.56■□□□□ 0.4
CDC42BPB-205ENST00000559245 TMEM150AQ86TG1 271 aa17.56■□□□□ 0.4
CDC42BPB-205ENST00000559245 MAB21L3Q8N8X9 362 aa17.56■□□□□ 0.4
CDC42BPB-205ENST00000559245 USP13Q92995 863 aaPredicted RBP17.56■□□□□ 0.4
CDC42BPB-205ENST00000559245 PYM1Q9BRP8 204 aaKnown RBP17.56■□□□□ 0.4
CDC42BPB-205ENST00000559245 ASB7Q9H672 318 aa17.56■□□□□ 0.4
CDC42BPB-205ENST00000559245 PARVGQ9HBI0 331 aa17.56■□□□□ 0.4
CDC42BPB-205ENST00000559245 ABI2Q9NYB9 513 aaPredicted RBP17.56■□□□□ 0.4
CDC42BPB-205ENST00000559245 TRAK2O60296 914 aa17.55■□□□□ 0.4
CDC42BPB-205ENST00000559245 RNF40O75150 1001 aa17.55■□□□□ 0.4
CDC42BPB-205ENST00000559245 AKAP3O75969 853 aa17.55■□□□□ 0.4
CDC42BPB-205ENST00000559245 EGFP01133 1207 aa17.55■□□□□ 0.4
CDC42BPB-205ENST00000559245 F11P03951 625 aa17.55■□□□□ 0.4
CDC42BPB-205ENST00000559245 DDX6P26196 483 aaKnown RBP eCLIP17.55■□□□□ 0.4
CDC42BPB-205ENST00000559245 ZNF131P52739 623 aa17.55■□□□□ 0.4
CDC42BPB-205ENST00000559245 NLRP12P59046 1061 aa17.55■□□□□ 0.4
CDC42BPB-205ENST00000559245 BFSP1Q12934 665 aa17.55■□□□□ 0.4
CDC42BPB-205ENST00000559245 PLA2G2CQ5R387 149 aa17.55■□□□□ 0.4
CDC42BPB-205ENST00000559245 WSCD1Q658N2 575 aa17.55■□□□□ 0.4
CDC42BPB-205ENST00000559245 ARL6IP4Q66PJ3 421 aaKnown RBP17.55■□□□□ 0.4
CDC42BPB-205ENST00000559245 CAMKK1Q8N5S9 505 aa17.55■□□□□ 0.4
CDC42BPB-205ENST00000559245 SMOC1Q9H4F8 434 aa17.55■□□□□ 0.4
CDC42BPB-205ENST00000559245 KIF9Q9HAQ2 790 aa17.55■□□□□ 0.4
CDC42BPB-205ENST00000559245 C2CD2Q9Y426 696 aa17.55■□□□□ 0.4
CDC42BPB-205ENST00000559245 PCDHGA5Q9Y5G8 931 aa17.55■□□□□ 0.4
CDC42BPB-205ENST00000559245 ANKRD63C9JTQ0 380 aa17.54■□□□□ 0.4
CDC42BPB-205ENST00000559245 ARSAP15289 507 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms