RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 KRT15P19012 456 aa17.49■□□□□ 0.39
SPG11-215ENST00000559193 RPA3P35244 121 aaPredicted RBP17.49■□□□□ 0.39
SPG11-215ENST00000559193 CDKN2BP42772 138 aa17.49■□□□□ 0.39
SPG11-215ENST00000559193 PPP1R15BQ5SWA1 713 aa17.49■□□□□ 0.39
SPG11-215ENST00000559193 FBF1Q8TES7 1133 aa17.49■□□□□ 0.39
SPG11-215ENST00000559193 NSMCE1Q8WV22 266 aa17.49■□□□□ 0.39
SPG11-215ENST00000559193 TMEM121Q9BTD3 319 aa17.49■□□□□ 0.39
SPG11-215ENST00000559193 SMG5Q9UPR3 1016 aaKnown RBP17.49■□□□□ 0.39
SPG11-215ENST00000559193 SHOC2Q9UQ13 582 aa17.49■□□□□ 0.39
SPG11-215ENST00000559193 MAFBQ9Y5Q3 323 aaPredicted RBP17.49■□□□□ 0.39
SPG11-215ENST00000559193 LRRD1A4D1F6 860 aa17.48■□□□□ 0.39
SPG11-215ENST00000559193 LSM8O95777 96 aaKnown RBP17.48■□□□□ 0.39
SPG11-215ENST00000559193 ASS1P00966 412 aaKnown RBP17.48■□□□□ 0.39
SPG11-215ENST00000559193 TNFAIP1Q13829 316 aa17.48■□□□□ 0.39
SPG11-215ENST00000559193 TMEM132BQ14DG7 1078 aa17.48■□□□□ 0.39
SPG11-215ENST00000559193 PDK4Q16654 411 aa17.48■□□□□ 0.39
SPG11-215ENST00000559193 GNPTABQ3T906 1256 aa17.48■□□□□ 0.39
SPG11-215ENST00000559193 TFDP3Q5H9I0 405 aa17.48■□□□□ 0.39
SPG11-215ENST00000559193 UTP4Q969X6 686 aaKnown RBP17.48■□□□□ 0.39
SPG11-215ENST00000559193 SMC6Q96SB8 1091 aa17.48■□□□□ 0.39
SPG11-215ENST00000559193 PCDH9Q9HC56 1237 aa17.48■□□□□ 0.39
SPG11-215ENST00000559193 ZNF302Q9NR11 478 aa17.48■□□□□ 0.39
SPG11-215ENST00000559193 CHKBQ9Y259 395 aa17.48■□□□□ 0.39
SPG11-215ENST00000559193 TTLL13PA6NNM8 815 aa17.48■□□□□ 0.39
SPG11-215ENST00000559193 ITGAVP06756 1048 aa17.48■□□□□ 0.39
SPG11-215ENST00000559193 KCNA3P22001 575 aa17.48■□□□□ 0.39
SPG11-215ENST00000559193 CCND1P24385 295 aa17.48■□□□□ 0.39
SPG11-215ENST00000559193 PDIA2Q13087 525 aaKnown RBP17.48■□□□□ 0.39
SPG11-215ENST00000559193 SLC1A5Q15758 541 aa17.48■□□□□ 0.39
SPG11-215ENST00000559193 DCUN1D2Q6PH85 259 aa17.48■□□□□ 0.39
SPG11-215ENST00000559193 ERP27Q96DN0 273 aa17.48■□□□□ 0.39
SPG11-215ENST00000559193 MRRFQ96E11 262 aaKnown RBP17.48■□□□□ 0.39
SPG11-215ENST00000559193 ETNK1Q9HBU6 452 aa17.48■□□□□ 0.39
SPG11-215ENST00000559193 NOP53Q9NZM5 478 aaKnown RBP17.48■□□□□ 0.39
SPG11-215ENST00000559193 SENP1Q9P0U3 644 aa17.48■□□□□ 0.39
SPG11-215ENST00000559193 A0A1W2PPM1 405 aa17.47■□□□□ 0.39
SPG11-215ENST00000559193 TYROBPO43914 113 aa17.47■□□□□ 0.39
SPG11-215ENST00000559193 EDF1O60869 148 aaKnown RBP17.47■□□□□ 0.39
SPG11-215ENST00000559193 TNFSF9P41273 254 aa17.47■□□□□ 0.39
SPG11-215ENST00000559193 OAZ1P54368 228 aa17.47■□□□□ 0.39
SPG11-215ENST00000559193 YARSP54577 528 aaKnown RBP17.47■□□□□ 0.39
SPG11-215ENST00000559193 GPX6P59796 221 aa17.47■□□□□ 0.39
SPG11-215ENST00000559193 CENPUQ71F23 418 aa17.47■□□□□ 0.39
SPG11-215ENST00000559193 SLC35B2Q8TB61 432 aa17.47■□□□□ 0.39
SPG11-215ENST00000559193 ADAM33Q9BZ11 813 aa17.47■□□□□ 0.39
SPG11-215ENST00000559193 IMPG2Q9BZV3 1241 aa17.47■□□□□ 0.39
SPG11-215ENST00000559193 TXLNGQ9NUQ3 528 aa17.47■□□□□ 0.39
SPG11-215ENST00000559193 ADAMTS5Q9UNA0 930 aa17.47■□□□□ 0.39
SPG11-215ENST00000559193 PHIPQ8WWQ0 1821 aa17.47■□□□□ 0.39
SPG11-215ENST00000559193 GOLGA8SH3BPF8 625 aa17.47■□□□□ 0.39
SPG11-215ENST00000559193 GOLGA8MH3BSY2 632 aa17.47■□□□□ 0.39
SPG11-215ENST00000559193 SGK1O00141 431 aa17.47■□□□□ 0.39
SPG11-215ENST00000559193 IFNB1P01574 187 aa17.47■□□□□ 0.39
SPG11-215ENST00000559193 DPEP1P16444 411 aa17.47■□□□□ 0.39
SPG11-215ENST00000559193 CA4P22748 312 aa17.47■□□□□ 0.39
SPG11-215ENST00000559193 GBP2P32456 591 aaPredicted RBP17.47■□□□□ 0.39
SPG11-215ENST00000559193 PSMC4P43686 418 aa17.47■□□□□ 0.39
SPG11-215ENST00000559193 GAD2Q05329 585 aa17.47■□□□□ 0.39
SPG11-215ENST00000559193 CAPSQ13938 189 aa17.47■□□□□ 0.39
SPG11-215ENST00000559193 ZNF394Q53GI3 561 aa17.47■□□□□ 0.39
SPG11-215ENST00000559193 CIAPIN1Q6FI81 312 aa17.47■□□□□ 0.39
SPG11-215ENST00000559193 ERICH1Q86X53 443 aa17.47■□□□□ 0.39
SPG11-215ENST00000559193 ANKMY2Q8IV38 441 aa17.47■□□□□ 0.39
SPG11-215ENST00000559193 BRSK2Q8IWQ3 736 aa17.47■□□□□ 0.39
SPG11-215ENST00000559193 WDTC1Q8N5D0 677 aa17.47■□□□□ 0.39
SPG11-215ENST00000559193 SLC7A3Q8WY07 619 aa17.47■□□□□ 0.39
SPG11-215ENST00000559193 MAK16Q9BXY0 300 aaKnown RBP17.47■□□□□ 0.39
SPG11-215ENST00000559193 VPS33BQ9H267 617 aa17.47■□□□□ 0.39
SPG11-215ENST00000559193 PSMC3IPQ9P2W1 217 aaPredicted RBP17.47■□□□□ 0.39
SPG11-215ENST00000559193 FARP1Q9Y4F1 1045 aaPredicted RBP17.47■□□□□ 0.39
SPG11-215ENST00000559193 USH1CQ9Y6N9 552 aa17.47■□□□□ 0.39
SPG11-215ENST00000559193 CLUHO75153 1309 aa17.47■□□□□ 0.39
SPG11-215ENST00000559193 MYH9P35579 1960 aaKnown RBP17.47■□□□□ 0.39
SPG11-215ENST00000559193 C3orf70A6NLC5 250 aaPredicted RBP17.46■□□□□ 0.39
SPG11-215ENST00000559193 FAM189A1O60320 539 aa17.46■□□□□ 0.39
SPG11-215ENST00000559193 STAM2O75886 525 aa17.46■□□□□ 0.39
SPG11-215ENST00000559193 ATG7O95352 703 aa17.46■□□□□ 0.39
SPG11-215ENST00000559193 FGFR1P11362 822 aa17.46■□□□□ 0.39
SPG11-215ENST00000559193 MYL6P60660 151 aa17.46■□□□□ 0.39
SPG11-215ENST00000559193 RASA2Q15283 850 aa17.46■□□□□ 0.39
SPG11-215ENST00000559193 CYP4A22Q5TCH4 519 aa17.46■□□□□ 0.39
SPG11-215ENST00000559193 GPAT2Q6NUI2 795 aa17.46■□□□□ 0.39
SPG11-215ENST00000559193 TMEM35BQ8NCS4 154 aa17.46■□□□□ 0.39
SPG11-215ENST00000559193 MTMR12Q9C0I1 747 aa17.46■□□□□ 0.39
SPG11-215ENST00000559193 DDX56Q9NY93 547 aaKnown RBP17.46■□□□□ 0.39
SPG11-215ENST00000559193 SLC24A2Q9UI40 661 aa17.46■□□□□ 0.39
SPG11-215ENST00000559193 HMGCS2P54868 508 aa17.46■□□□□ 0.39
SPG11-215ENST00000559193 LACTBP83111 547 aaPredicted RBP17.46■□□□□ 0.39
SPG11-215ENST00000559193 PLCB3Q01970 1234 aa17.46■□□□□ 0.39
SPG11-215ENST00000559193 PIGHQ14442 188 aaPredicted RBP17.46■□□□□ 0.39
SPG11-215ENST00000559193 EFTUD2Q15029 972 aaKnown RBP eCLIP17.46■□□□□ 0.39
SPG11-215ENST00000559193 EFHC2Q5JST6 749 aa17.46■□□□□ 0.39
SPG11-215ENST00000559193 NBPF12Q5TAG4 269 aaPredicted RBP17.46■□□□□ 0.39
SPG11-215ENST00000559193 NIPA2Q8N8Q9 360 aa17.46■□□□□ 0.39
SPG11-215ENST00000559193 TFAP2BQ92481 460 aa17.46■□□□□ 0.39
SPG11-215ENST00000559193 TMEM134Q9H6X4 195 aa17.46■□□□□ 0.39
SPG11-215ENST00000559193 ACAD9Q9H845 621 aa17.46■□□□□ 0.39
SPG11-215ENST00000559193 CISHQ9NSE2 258 aa17.46■□□□□ 0.39
SPG11-215ENST00000559193 DOCK1Q14185 1865 aa17.46■□□□□ 0.39
SPG11-215ENST00000559193 TNS1Q9HBL0 1735 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms