RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 PAQR9Q6ZVX9 377 aa13.58□□□□□ -0.24
RABGGTA-207ENST00000558936 TMEM150AQ86TG1 271 aa13.58□□□□□ -0.24
RABGGTA-207ENST00000558936 TOP6BLQ8N6T0 577 aa13.58□□□□□ -0.24
RABGGTA-207ENST00000558936 GOLGA5Q8TBA6 731 aa13.58□□□□□ -0.24
RABGGTA-207ENST00000558936 TMC2Q8TDI7 906 aa13.58□□□□□ -0.24
RABGGTA-207ENST00000558936 GPR152Q8TDT2 470 aa13.58□□□□□ -0.24
RABGGTA-207ENST00000558936 CACTINQ8WUQ7 758 aaKnown RBP13.58□□□□□ -0.24
RABGGTA-207ENST00000558936 FGF14Q92915 247 aa13.58□□□□□ -0.24
RABGGTA-207ENST00000558936 ANKRD36BP1Q96IX9 119 aa13.58□□□□□ -0.24
RABGGTA-207ENST00000558936 C1QTNF1Q9BXJ1 281 aa13.58□□□□□ -0.24
RABGGTA-207ENST00000558936 PLA2G2FQ9BZM2 168 aa13.58□□□□□ -0.24
RABGGTA-207ENST00000558936 SMYD3Q9H7B4 428 aa13.58□□□□□ -0.24
RABGGTA-207ENST00000558936 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.58□□□□□ -0.24
RABGGTA-207ENST00000558936 DDX43Q9NXZ2 648 aaKnown RBP13.58□□□□□ -0.24
RABGGTA-207ENST00000558936 EPS15L1Q9UBC2 864 aa13.58□□□□□ -0.24
RABGGTA-207ENST00000558936 HMGXB4Q9UGU5 601 aa13.58□□□□□ -0.24
RABGGTA-207ENST00000558936 GTF3C4Q9UKN8 822 aa13.58□□□□□ -0.24
RABGGTA-207ENST00000558936 NR2E1Q9Y466 385 aa13.58□□□□□ -0.24
RABGGTA-207ENST00000558936 KMT2EQ8IZD2 1858 aa13.58□□□□□ -0.24
RABGGTA-207ENST00000558936 ZNF318Q5VUA4 2279 aa13.58□□□□□ -0.24
RABGGTA-207ENST00000558936 SHISA7A6NL88 538 aa13.57□□□□□ -0.24
RABGGTA-207ENST00000558936 ANHXE9PGG2 379 aa13.57□□□□□ -0.24
RABGGTA-207ENST00000558936 CALUO43852 315 aaPredicted RBP13.57□□□□□ -0.24
RABGGTA-207ENST00000558936 LAMP2P13473 410 aa13.57□□□□□ -0.24
RABGGTA-207ENST00000558936 CPB1P15086 417 aa13.57□□□□□ -0.24
RABGGTA-207ENST00000558936 HMGA1P17096 107 aaKnown RBP13.57□□□□□ -0.24
RABGGTA-207ENST00000558936 WARSP23381 471 aaKnown RBP13.57□□□□□ -0.24
RABGGTA-207ENST00000558936 FCARP24071 287 aa13.57□□□□□ -0.24
RABGGTA-207ENST00000558936 GCLMP48507 274 aa13.57□□□□□ -0.24
RABGGTA-207ENST00000558936 VAMP7P51809 220 aa13.57□□□□□ -0.24
RABGGTA-207ENST00000558936 PSMC1P62191 440 aaKnown RBP13.57□□□□□ -0.24
RABGGTA-207ENST00000558936 ZXDAP98168 799 aa13.57□□□□□ -0.24
RABGGTA-207ENST00000558936 MTMR3Q13615 1198 aa13.57□□□□□ -0.24
RABGGTA-207ENST00000558936 CBWD6Q4V339 395 aa13.57□□□□□ -0.24
RABGGTA-207ENST00000558936 INTS6LQ5JSJ4 861 aaKnown RBP13.57□□□□□ -0.24
RABGGTA-207ENST00000558936 CBWD3Q5JTY5 395 aa13.57□□□□□ -0.24
RABGGTA-207ENST00000558936 CBWD5Q5RIA9 395 aa13.57□□□□□ -0.24
RABGGTA-207ENST00000558936 STXBP5Q5T5C0 1151 aa13.57□□□□□ -0.24
RABGGTA-207ENST00000558936 PARM1Q6UWI2 310 aa13.57□□□□□ -0.24
RABGGTA-207ENST00000558936 GAREM2Q75VX8 874 aa13.57□□□□□ -0.24
RABGGTA-207ENST00000558936 IRF2BP1Q8IU81 584 aa13.57□□□□□ -0.24
RABGGTA-207ENST00000558936 NPAS3Q8IXF0 933 aa13.57□□□□□ -0.24
RABGGTA-207ENST00000558936 ING5Q8WYH8 240 aa13.57□□□□□ -0.24
RABGGTA-207ENST00000558936 FGF13Q92913 245 aa13.57□□□□□ -0.24
RABGGTA-207ENST00000558936 RSPRY1Q96DX4 576 aa13.57□□□□□ -0.24
RABGGTA-207ENST00000558936 ZNF560Q96MR9 790 aa13.57□□□□□ -0.24
RABGGTA-207ENST00000558936 LRRC3BQ96PB8 259 aa13.57□□□□□ -0.24
RABGGTA-207ENST00000558936 TWNKQ96RR1 684 aa13.57□□□□□ -0.24
RABGGTA-207ENST00000558936 KCNK12Q9HB15 430 aa13.57□□□□□ -0.24
RABGGTA-207ENST00000558936 AVENQ9NQS1 362 aaPredicted RBP13.57□□□□□ -0.24
RABGGTA-207ENST00000558936 KIAA1468Q9P260 1216 aa13.57□□□□□ -0.24
RABGGTA-207ENST00000558936 GPR37L1O60883 481 aa13.56□□□□□ -0.24
RABGGTA-207ENST00000558936 TADA3O75528 432 aa13.56□□□□□ -0.24
RABGGTA-207ENST00000558936 ASS1P00966 412 aaKnown RBP13.56□□□□□ -0.24
RABGGTA-207ENST00000558936 HLA-DRAP01903 254 aa13.56□□□□□ -0.24
RABGGTA-207ENST00000558936 TNNC2P02585 160 aa13.56□□□□□ -0.24
RABGGTA-207ENST00000558936 HAPLN1P10915 354 aaPredicted RBP13.56□□□□□ -0.24
RABGGTA-207ENST00000558936 PAX3P23760 479 aa13.56□□□□□ -0.24
RABGGTA-207ENST00000558936 CCNE1P24864 410 aa13.56□□□□□ -0.24
RABGGTA-207ENST00000558936 CYP2F1P24903 491 aa13.56□□□□□ -0.24
RABGGTA-207ENST00000558936 PNPLA4P41247 253 aa13.56□□□□□ -0.24
RABGGTA-207ENST00000558936 ASPAP45381 313 aa13.56□□□□□ -0.24
RABGGTA-207ENST00000558936 HTR4Q13639 388 aa13.56□□□□□ -0.24
RABGGTA-207ENST00000558936 NCOA4Q13772 614 aa13.56□□□□□ -0.24
RABGGTA-207ENST00000558936 PTPN21Q16825 1174 aa13.56□□□□□ -0.24
RABGGTA-207ENST00000558936 LIN9Q5TKA1 542 aa13.56□□□□□ -0.24
RABGGTA-207ENST00000558936 CCDC149Q6ZUS6 474 aa13.56□□□□□ -0.24
RABGGTA-207ENST00000558936 GET4Q7L5D6 327 aaPredicted RBP13.56□□□□□ -0.24
RABGGTA-207ENST00000558936 USP37Q86T82 979 aa13.56□□□□□ -0.24
RABGGTA-207ENST00000558936 FAM186BQ8IYM0 893 aa13.56□□□□□ -0.24
RABGGTA-207ENST00000558936 ADGRF2Q8IZF7 708 aa13.56□□□□□ -0.24
RABGGTA-207ENST00000558936 SHKBP1Q8TBC3 707 aa13.56□□□□□ -0.24
RABGGTA-207ENST00000558936 WHAMMQ8TF30 809 aa13.56□□□□□ -0.24
RABGGTA-207ENST00000558936 EDAQ92838 391 aa13.56□□□□□ -0.24
RABGGTA-207ENST00000558936 FNBP1Q96RU3 617 aa13.56□□□□□ -0.24
RABGGTA-207ENST00000558936 ACBD6Q9BR61 282 aa13.56□□□□□ -0.24
RABGGTA-207ENST00000558936 LRFN3Q9BTN0 628 aa13.56□□□□□ -0.24
RABGGTA-207ENST00000558936 KIF26AQ9ULI4 1882 aaPredicted RBP13.56□□□□□ -0.24
RABGGTA-207ENST00000558936 MYO15AQ9UKN7 3530 aa13.55□□□□□ -0.24
RABGGTA-207ENST00000558936 IKBKBO14920 756 aa13.55□□□□□ -0.24
RABGGTA-207ENST00000558936 KINO60870 393 aaKnown RBP13.55□□□□□ -0.24
RABGGTA-207ENST00000558936 TACC1O75410 805 aa13.55□□□□□ -0.24
RABGGTA-207ENST00000558936 PDGFRBP09619 1106 aa13.55□□□□□ -0.24
RABGGTA-207ENST00000558936 FSHRP23945 695 aa13.55□□□□□ -0.24
RABGGTA-207ENST00000558936 STX17P56962 302 aa13.55□□□□□ -0.24
RABGGTA-207ENST00000558936 ORC1Q13415 861 aa13.55□□□□□ -0.24
RABGGTA-207ENST00000558936 WDR72Q3MJ13 1102 aa13.55□□□□□ -0.24
RABGGTA-207ENST00000558936 RTL10Q7L3V2 364 aa13.55□□□□□ -0.24
RABGGTA-207ENST00000558936 DPH6Q7L8W6 267 aa13.55□□□□□ -0.24
RABGGTA-207ENST00000558936 OTOP3Q7RTS5 596 aa13.55□□□□□ -0.24
RABGGTA-207ENST00000558936 DNAJB7Q7Z6W7 309 aaPredicted RBP13.55□□□□□ -0.24
RABGGTA-207ENST00000558936 TDRD5Q8NAT2 981 aaKnown RBP13.55□□□□□ -0.24
RABGGTA-207ENST00000558936 RIN3Q8TB24 985 aa13.55□□□□□ -0.24
RABGGTA-207ENST00000558936 TATDN2Q93075 761 aa13.55□□□□□ -0.24
RABGGTA-207ENST00000558936 SLC35C1Q96A29 364 aa13.55□□□□□ -0.24
RABGGTA-207ENST00000558936 CORO1BQ9BR76 489 aa13.55□□□□□ -0.24
RABGGTA-207ENST00000558936 CLSTN2Q9H4D0 955 aa13.55□□□□□ -0.24
RABGGTA-207ENST00000558936 PIDD1Q9HB75 910 aa13.55□□□□□ -0.24
RABGGTA-207ENST00000558936 DSEQ9UL01 958 aa13.55□□□□□ -0.24
RABGGTA-207ENST00000558936 NUP210Q8TEM1 1887 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms