RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 SELENOOQ9BVL4 669 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 TLR10Q9BXR5 811 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 STK33Q9BYT3 514 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 TMEM117Q9H0C3 514 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 NXF3Q9H4D5 531 aaKnown RBP8.2□□□□□ -1.1
LRRC28-211ENST00000558890 VRTNQ9H8Y1 702 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 RSAD1Q9HA92 442 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 SLC28A3Q9HAS3 691 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 SIX2Q9NPC8 291 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 NAGPAQ9UK23 515 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 DNAJC12Q9UKB3 198 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 ITGA11Q9UKX5 1188 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 UBQLN1Q9UMX0 589 aaKnown RBP8.2□□□□□ -1.1
LRRC28-211ENST00000558890 COQ4Q9Y3A0 265 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 RWDD3Q9Y3V2 267 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 PCDHB7Q9Y5E2 793 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 MRPL42Q9Y6G3 142 aaKnown RBP8.2□□□□□ -1.1
LRRC28-211ENST00000558890 UNC80Q8N2C7 3258 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 TRIP11Q15643 1979 aa8.2□□□□□ -1.1
LRRC28-211ENST00000558890 CUL9Q8IWT3 2517 aa8.19□□□□□ -1.1
LRRC28-211ENST00000558890 A0A0A6YYK5 440 aaPredicted RBP8.19□□□□□ -1.1
LRRC28-211ENST00000558890 ARHGEF37A1IGU5 675 aa8.19□□□□□ -1.1
LRRC28-211ENST00000558890 F8VZ95 297 aa8.19□□□□□ -1.1
LRRC28-211ENST00000558890 GALR2O43603 387 aaPredicted RBP8.19□□□□□ -1.1
LRRC28-211ENST00000558890 RECQL4O94761 1208 aa8.19□□□□□ -1.1
LRRC28-211ENST00000558890 SLC34A2O95436 690 aa8.19□□□□□ -1.1
LRRC28-211ENST00000558890 FTCDO95954 541 aa8.19□□□□□ -1.1
LRRC28-211ENST00000558890 TRIM49P0CI25 452 aa8.19□□□□□ -1.1
LRRC28-211ENST00000558890 TRIM49CP0CI26 452 aa8.19□□□□□ -1.1
LRRC28-211ENST00000558890 LRPAP1P30533 357 aa8.19□□□□□ -1.1
LRRC28-211ENST00000558890 ATICP31939 592 aa8.19□□□□□ -1.1
LRRC28-211ENST00000558890 RPL9P32969 192 aaKnown RBP8.19□□□□□ -1.1
LRRC28-211ENST00000558890 PNPLA4P41247 253 aa8.19□□□□□ -1.1
LRRC28-211ENST00000558890 DSC1Q08554 894 aa8.19□□□□□ -1.1
LRRC28-211ENST00000558890 DUOXA2Q1HG44 320 aa8.19□□□□□ -1.1
LRRC28-211ENST00000558890 SLC10A6Q3KNW5 377 aa8.19□□□□□ -1.1
LRRC28-211ENST00000558890 ZACNQ401N2 412 aa8.19□□□□□ -1.1
LRRC28-211ENST00000558890 EPC2Q52LR7 807 aa8.19□□□□□ -1.1
LRRC28-211ENST00000558890 MEI1Q5TIA1 1274 aa8.19□□□□□ -1.1
LRRC28-211ENST00000558890 ALKBH5Q6P6C2 394 aaKnown RBP8.19□□□□□ -1.1
LRRC28-211ENST00000558890 C15orf39Q6ZRI6 1047 aa8.19□□□□□ -1.1
LRRC28-211ENST00000558890 IRF2BP2Q7Z5L9 587 aa8.19□□□□□ -1.1
LRRC28-211ENST00000558890 CBWD2Q8IUF1 395 aa8.19□□□□□ -1.1
LRRC28-211ENST00000558890 TMEM192Q8IY95 271 aa8.19□□□□□ -1.1
LRRC28-211ENST00000558890 GPR65Q8IYL9 337 aa8.19□□□□□ -1.1
LRRC28-211ENST00000558890 LRRC43Q8N309 656 aa8.19□□□□□ -1.1
LRRC28-211ENST00000558890 LRRC52Q8N7C0 313 aa8.19□□□□□ -1.1
LRRC28-211ENST00000558890 URGCPQ8TCY9 931 aa8.19□□□□□ -1.1
LRRC28-211ENST00000558890 DDX27Q96GQ7 796 aaKnown RBP8.19□□□□□ -1.1
LRRC28-211ENST00000558890 ZBTB45Q96K62 511 aaPredicted RBP8.19□□□□□ -1.1
LRRC28-211ENST00000558890 PBKQ96KB5 322 aa8.19□□□□□ -1.1
LRRC28-211ENST00000558890 CALR3Q96L12 384 aaKnown RBP8.19□□□□□ -1.1
LRRC28-211ENST00000558890 FAM161BQ96MY7 647 aa8.19□□□□□ -1.1
LRRC28-211ENST00000558890 PPP1R10Q96QC0 940 aaKnown RBP8.19□□□□□ -1.1
LRRC28-211ENST00000558890 TGS1Q96RS0 853 aaKnown RBP8.19□□□□□ -1.1
LRRC28-211ENST00000558890 RPS6KC1Q96S38 1066 aa8.19□□□□□ -1.1
LRRC28-211ENST00000558890 YME1L1Q96TA2 773 aa8.19□□□□□ -1.1
LRRC28-211ENST00000558890 PSMB7Q99436 277 aa8.19□□□□□ -1.1
LRRC28-211ENST00000558890 TMEM175Q9BSA9 504 aa8.19□□□□□ -1.1
LRRC28-211ENST00000558890 ZBED2Q9BTP6 218 aa8.19□□□□□ -1.1
LRRC28-211ENST00000558890 ZMYND15Q9H091 742 aa8.19□□□□□ -1.1
LRRC28-211ENST00000558890 IKZF4Q9H2S9 585 aa8.19□□□□□ -1.1
LRRC28-211ENST00000558890 PRDM12Q9H4Q4 367 aa8.19□□□□□ -1.1
LRRC28-211ENST00000558890 CERS4Q9HA82 394 aa8.19□□□□□ -1.1
LRRC28-211ENST00000558890 TMEM8AQ9HCN3 771 aa8.19□□□□□ -1.1
LRRC28-211ENST00000558890 PDE11AQ9HCR9 933 aa8.19□□□□□ -1.1
LRRC28-211ENST00000558890 APEX2Q9UBZ4 518 aa8.19□□□□□ -1.1
LRRC28-211ENST00000558890 LRFN2Q9ULH4 789 aa8.19□□□□□ -1.1
LRRC28-211ENST00000558890 HES2Q9Y543 173 aa8.19□□□□□ -1.1
LRRC28-211ENST00000558890 ARL5CA6NH57 179 aa8.18□□□□□ -1.1
LRRC28-211ENST00000558890 TBKBP1A7MCY6 615 aa8.18□□□□□ -1.1
LRRC28-211ENST00000558890 TISP43B9A030 160 aa8.18□□□□□ -1.1
LRRC28-211ENST00000558890 H3BNC9 293 aa8.18□□□□□ -1.1
LRRC28-211ENST00000558890 H3BQF6 201 aa8.18□□□□□ -1.1
LRRC28-211ENST00000558890 GABBR2O75899 941 aa8.18□□□□□ -1.1
LRRC28-211ENST00000558890 DDHD2O94830 711 aa8.18□□□□□ -1.1
LRRC28-211ENST00000558890 KIF4AO95239 1232 aa8.18□□□□□ -1.1
LRRC28-211ENST00000558890 RB1P06400 928 aa8.18□□□□□ -1.1
LRRC28-211ENST00000558890 THP07101 528 aa8.18□□□□□ -1.1
LRRC28-211ENST00000558890 CXCL8P10145 99 aa8.18□□□□□ -1.1
LRRC28-211ENST00000558890 TNFAIP3P21580 790 aa8.18□□□□□ -1.1
LRRC28-211ENST00000558890 DNAJB1P25685 340 aa8.18□□□□□ -1.1
LRRC28-211ENST00000558890 TNFRSF8P28908 595 aa8.18□□□□□ -1.1
LRRC28-211ENST00000558890 ACOT2P49753 483 aa8.18□□□□□ -1.1
LRRC28-211ENST00000558890 DNA2P51530 1060 aa8.18□□□□□ -1.1
LRRC28-211ENST00000558890 DRAP1Q14919 205 aaPredicted RBP8.18□□□□□ -1.1
LRRC28-211ENST00000558890 TMEM132DQ14C87 1099 aa8.18□□□□□ -1.1
LRRC28-211ENST00000558890 NOMO2Q5JPE7 1267 aa8.18□□□□□ -1.1
LRRC28-211ENST00000558890 ZNF697Q5TEC3 545 aa8.18□□□□□ -1.1
LRRC28-211ENST00000558890 PPP2R2DQ66LE6 453 aa8.18□□□□□ -1.1
LRRC28-211ENST00000558890 KRT39Q6A163 491 aa8.18□□□□□ -1.1
LRRC28-211ENST00000558890 DPY19L2P1Q6NXN4 242 aa8.18□□□□□ -1.1
LRRC28-211ENST00000558890 EMBQ6PCB8 327 aa8.18□□□□□ -1.1
LRRC28-211ENST00000558890 CCNI2Q6ZMN8 369 aaPredicted RBP8.18□□□□□ -1.1
LRRC28-211ENST00000558890 PEX26Q7Z412 305 aa8.18□□□□□ -1.1
LRRC28-211ENST00000558890 ZBTB33Q86T24 672 aa8.18□□□□□ -1.1
LRRC28-211ENST00000558890 ZNF280BQ86YH2 543 aa8.18□□□□□ -1.1
LRRC28-211ENST00000558890 IFT20Q8IY31 132 aa8.18□□□□□ -1.1
LRRC28-211ENST00000558890 THNSL1Q8IYQ7 743 aa8.18□□□□□ -1.1
LRRC28-211ENST00000558890 ABI1Q8IZP0 508 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms