RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 IRF7Q92985 503 aa12.44□□□□□ -0.42
CASC4-205ENST00000558735 PSMG2Q969U7 264 aa12.44□□□□□ -0.42
CASC4-205ENST00000558735 LRRC3BQ96PB8 259 aa12.44□□□□□ -0.42
CASC4-205ENST00000558735 PYM1Q9BRP8 204 aaKnown RBP12.44□□□□□ -0.42
CASC4-205ENST00000558735 FAM213AQ9BRX8 229 aa12.44□□□□□ -0.42
CASC4-205ENST00000558735 MKNK1Q9BUB5 465 aa12.44□□□□□ -0.42
CASC4-205ENST00000558735 TRPV5Q9NQA5 729 aa12.44□□□□□ -0.42
CASC4-205ENST00000558735 PANK4Q9NVE7 773 aa12.44□□□□□ -0.42
CASC4-205ENST00000558735 DSEQ9UL01 958 aa12.44□□□□□ -0.42
CASC4-205ENST00000558735 EXOC7Q9UPT5 735 aa12.44□□□□□ -0.42
CASC4-205ENST00000558735 SCN1AP35498 2009 aa12.44□□□□□ -0.42
CASC4-205ENST00000558735 F5P12259 2224 aa12.43□□□□□ -0.42
CASC4-205ENST00000558735 ZZEF1O43149 2961 aa12.43□□□□□ -0.42
CASC4-205ENST00000558735 GOLGA8IPA6NC78 632 aa12.43□□□□□ -0.42
CASC4-205ENST00000558735 GOLGA8JA6NMD2 632 aa12.43□□□□□ -0.42
CASC4-205ENST00000558735 MAN2B1O00754 1011 aa12.43□□□□□ -0.42
CASC4-205ENST00000558735 FOXD2O60548 495 aaPredicted RBP12.43□□□□□ -0.42
CASC4-205ENST00000558735 PRPF6O94906 941 aaKnown RBP12.43□□□□□ -0.42
CASC4-205ENST00000558735 IL18RAPO95256 599 aa12.43□□□□□ -0.42
CASC4-205ENST00000558735 RETP07949 1114 aa12.43□□□□□ -0.42
CASC4-205ENST00000558735 GARTP22102 1010 aa12.43□□□□□ -0.42
CASC4-205ENST00000558735 STAT6P42226 847 aa12.43□□□□□ -0.42
CASC4-205ENST00000558735 TUFMP49411 452 aaKnown RBP12.43□□□□□ -0.42
CASC4-205ENST00000558735 PPP2R5DQ14738 602 aa12.43□□□□□ -0.42
CASC4-205ENST00000558735 SLC39A12Q504Y0 691 aa12.43□□□□□ -0.42
CASC4-205ENST00000558735 STXBP5Q5T5C0 1151 aa12.43□□□□□ -0.42
CASC4-205ENST00000558735 TSSK4Q6SA08 328 aa12.43□□□□□ -0.42
CASC4-205ENST00000558735 METTL23Q86XA0 190 aa12.43□□□□□ -0.42
CASC4-205ENST00000558735 NT5DC4Q86YG4 428 aa12.43□□□□□ -0.42
CASC4-205ENST00000558735 THEM5Q8N1Q8 247 aa12.43□□□□□ -0.42
CASC4-205ENST00000558735 CXorf38Q8TB03 319 aa12.43□□□□□ -0.42
CASC4-205ENST00000558735 SAAL1Q96ER3 474 aa12.43□□□□□ -0.42
CASC4-205ENST00000558735 CBWD1Q9BRT8 395 aa12.43□□□□□ -0.42
CASC4-205ENST00000558735 ATXN3LQ9H3M9 355 aa12.43□□□□□ -0.42
CASC4-205ENST00000558735 FRYQ5TBA9 3013 aa12.43□□□□□ -0.42
CASC4-205ENST00000558735 ARNTLO00327 626 aa12.42□□□□□ -0.42
CASC4-205ENST00000558735 ZNF263O14978 683 aa12.42□□□□□ -0.42
CASC4-205ENST00000558735 SPTLC2O15270 562 aa12.42□□□□□ -0.42
CASC4-205ENST00000558735 LDHAP00338 332 aaKnown RBP12.42□□□□□ -0.42
CASC4-205ENST00000558735 ATF6P18850 670 aa12.42□□□□□ -0.42
CASC4-205ENST00000558735 GABRR2P28476 465 aa12.42□□□□□ -0.42
CASC4-205ENST00000558735 MLLT6P55198 1093 aaPredicted RBP12.42□□□□□ -0.42
CASC4-205ENST00000558735 TFAMQ00059 246 aaKnown RBP12.42□□□□□ -0.42
CASC4-205ENST00000558735 STK38Q15208 465 aa12.42□□□□□ -0.42
CASC4-205ENST00000558735 E2F4Q16254 413 aa12.42□□□□□ -0.42
CASC4-205ENST00000558735 PPM1JQ5JR12 505 aa12.42□□□□□ -0.42
CASC4-205ENST00000558735 BRSK2Q8IWQ3 736 aa12.42□□□□□ -0.42
CASC4-205ENST00000558735 SYCP3Q8IZU3 236 aa12.42□□□□□ -0.42
CASC4-205ENST00000558735 CSGALNACT2Q8N6G5 542 aa12.42□□□□□ -0.42
CASC4-205ENST00000558735 C1orf127Q8N9H9 656 aa12.42□□□□□ -0.42
CASC4-205ENST00000558735 GLIS3Q8NEA6 775 aa12.42□□□□□ -0.42
CASC4-205ENST00000558735 GIPC2Q8TF65 315 aa12.42□□□□□ -0.42
CASC4-205ENST00000558735 DEPDC1BQ8WUY9 529 aa12.42□□□□□ -0.42
CASC4-205ENST00000558735 E2F7Q96AV8 911 aa12.42□□□□□ -0.42
CASC4-205ENST00000558735 FAM84AQ96KN4 292 aa12.42□□□□□ -0.42
CASC4-205ENST00000558735 LPIN3Q9BQK8 851 aa12.42□□□□□ -0.42
CASC4-205ENST00000558735 PCIF1Q9H4Z3 704 aa12.42□□□□□ -0.42
CASC4-205ENST00000558735 SLITRK6Q9H5Y7 841 aa12.42□□□□□ -0.42
CASC4-205ENST00000558735 IL21Q9HBE4 155 aa12.42□□□□□ -0.42
CASC4-205ENST00000558735 KBTBD4Q9NVX7 518 aa12.42□□□□□ -0.42
CASC4-205ENST00000558735 RAB23Q9ULC3 237 aa12.42□□□□□ -0.42
CASC4-205ENST00000558735 NDRG2Q9UN36 371 aaKnown RBP12.42□□□□□ -0.42
CASC4-205ENST00000558735 AGAP1Q9UPQ3 857 aa12.42□□□□□ -0.42
CASC4-205ENST00000558735 CEP295Q9C0D2 2601 aa12.42□□□□□ -0.42
CASC4-205ENST00000558735 TULP1O00294 542 aaPredicted RBP12.41□□□□□ -0.42
CASC4-205ENST00000558735 CHADO15335 359 aa12.41□□□□□ -0.42
CASC4-205ENST00000558735 EXTL3O43909 919 aa12.41□□□□□ -0.42
CASC4-205ENST00000558735 PPP6R2O75170 966 aa12.41□□□□□ -0.42
CASC4-205ENST00000558735 PAPSS2O95340 614 aaPredicted RBP12.41□□□□□ -0.42
CASC4-205ENST00000558735 ITGB3P05106 788 aa12.41□□□□□ -0.42
CASC4-205ENST00000558735 HAPLN1P10915 354 aaPredicted RBP12.41□□□□□ -0.42
CASC4-205ENST00000558735 POLR2BP30876 1174 aaKnown RBP12.41□□□□□ -0.42
CASC4-205ENST00000558735 HOXD13P35453 343 aa12.41□□□□□ -0.42
CASC4-205ENST00000558735 CCR3P51677 355 aa12.41□□□□□ -0.42
CASC4-205ENST00000558735 FCHO2Q0JRZ9 810 aa12.41□□□□□ -0.42
CASC4-205ENST00000558735 SPEM2Q0P670 501 aa12.41□□□□□ -0.42
CASC4-205ENST00000558735 ALCAMQ13740 583 aa12.41□□□□□ -0.42
CASC4-205ENST00000558735 CSRP2Q16527 193 aa12.41□□□□□ -0.42
CASC4-205ENST00000558735 MGAT5BQ3V5L5 792 aa12.41□□□□□ -0.42
CASC4-205ENST00000558735 SV2CQ496J9 727 aa12.41□□□□□ -0.42
CASC4-205ENST00000558735 GPR158Q5T848 1215 aa12.41□□□□□ -0.42
CASC4-205ENST00000558735 ITIH5Q86UX2 942 aa12.41□□□□□ -0.42
CASC4-205ENST00000558735 CCDC65Q8IXS2 484 aa12.41□□□□□ -0.42
CASC4-205ENST00000558735 PDCL2Q8N4E4 241 aa12.41□□□□□ -0.42
CASC4-205ENST00000558735 CACTINQ8WUQ7 758 aaKnown RBP12.41□□□□□ -0.42
CASC4-205ENST00000558735 DDX1Q92499 740 aaKnown RBP12.41□□□□□ -0.42
CASC4-205ENST00000558735 FAM3CQ92520 227 aa12.41□□□□□ -0.42
CASC4-205ENST00000558735 HPS3Q969F9 1004 aa12.41□□□□□ -0.42
CASC4-205ENST00000558735 SNX21Q969T3 373 aa12.41□□□□□ -0.42
CASC4-205ENST00000558735 SEPT5Q99719 369 aaPredicted RBP12.41□□□□□ -0.42
CASC4-205ENST00000558735 SLC46A2Q9BY10 475 aa12.41□□□□□ -0.42
CASC4-205ENST00000558735 TMEM206Q9H813 350 aa12.41□□□□□ -0.42
CASC4-205ENST00000558735 LMAN1LQ9HAT1 526 aa12.41□□□□□ -0.42
CASC4-205ENST00000558735 PDE11AQ9HCR9 933 aa12.41□□□□□ -0.42
CASC4-205ENST00000558735 TMLHEQ9NVH6 421 aa12.41□□□□□ -0.42
CASC4-205ENST00000558735 ANK1P16157 1881 aa12.4□□□□□ -0.42
CASC4-205ENST00000558735 FGF19O95750 216 aa12.4□□□□□ -0.42
CASC4-205ENST00000558735 HMGA1P17096 107 aaKnown RBP12.4□□□□□ -0.42
CASC4-205ENST00000558735 CCNE1P24864 410 aa12.4□□□□□ -0.42
CASC4-205ENST00000558735 CNR2P34972 360 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms