RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 LOC285556D6RIA3 1793 aa11.45□□□□□ -0.58
CSPG4P5-201ENST00000558731 ASGR1P07306 291 aa11.45□□□□□ -0.58
CSPG4P5-201ENST00000558731 TUBBP07437 444 aa11.45□□□□□ -0.58
CSPG4P5-201ENST00000558731 KRT3P12035 628 aa11.45□□□□□ -0.58
CSPG4P5-201ENST00000558731 PROZP22891 400 aa11.45□□□□□ -0.58
CSPG4P5-201ENST00000558731 SP3Q02447 781 aa11.45□□□□□ -0.58
CSPG4P5-201ENST00000558731 CFAP58Q5T655 872 aa11.45□□□□□ -0.58
CSPG4P5-201ENST00000558731 ZNF677Q86XU0 584 aa11.45□□□□□ -0.58
CSPG4P5-201ENST00000558731 HSPH1Q92598 858 aa11.45□□□□□ -0.58
CSPG4P5-201ENST00000558731 EMID1Q96A84 441 aaPredicted RBP11.45□□□□□ -0.58
CSPG4P5-201ENST00000558731 ELOVL4Q9GZR5 314 aa11.45□□□□□ -0.58
CSPG4P5-201ENST00000558731 CARD9Q9H257 536 aa11.45□□□□□ -0.58
CSPG4P5-201ENST00000558731 NGRNQ9NPE2 291 aaKnown RBP11.45□□□□□ -0.58
CSPG4P5-201ENST00000558731 GJD2Q9UKL4 321 aa11.45□□□□□ -0.58
CSPG4P5-201ENST00000558731 TLL2Q9Y6L7 1015 aa11.45□□□□□ -0.58
CSPG4P5-201ENST00000558731 COL1A2P08123 1366 aa11.45□□□□□ -0.58
CSPG4P5-201ENST00000558731 MED7O43513 233 aa11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 CYP1A2P05177 515 aa11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 TCF4P15884 667 aa11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 HOXA11P31270 313 aaPredicted RBP11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 CLDN10P78369 228 aa11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 PURAQ00577 322 aaKnown RBP11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 MAMLD1Q13495 774 aa11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 CCDC137Q6PK04 289 aaKnown RBP11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 TRIM72Q6ZMU5 477 aa11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 FEZF2Q8TBJ5 459 aa11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 FAM149B1Q96BN6 582 aa11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 TMEM176AQ96HP8 235 aa11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 MRPL45Q9BRJ2 306 aaKnown RBP11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 CALN1Q9BXU9 219 aa11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 WNT8AQ9H1J5 351 aa11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 SNX25Q9H3E2 840 aa11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 SCINQ9Y6U3 715 aa11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 TLDC2A0PJX2 215 aa11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 CASTOR2A6NHX0 329 aa11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 RALAP11233 206 aa11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 GOLGA7BQ2TAP0 167 aa11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 DCAF4L1Q3SXM0 396 aa11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 SRLQ86TD4 932 aa11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 MICALL1Q8N3F8 863 aa11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 ACTRT1Q8TDG2 376 aa11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 GAD1Q99259 594 aa11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 MTG1Q9BT17 334 aaPredicted RBP11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 MED10Q9BTT4 135 aa11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 NT5C1AQ9BXI3 368 aa11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 RNF186Q9NXI6 227 aa11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 NENFQ9UMX5 172 aa11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 ATP8A1Q9Y2Q0 1164 aa11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 H3BQF6 201 aa11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 I3L4J1 428 aa11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 POMCP01189 267 aa11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 GGCXP38435 758 aa11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 MLH1P40692 756 aa11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 EPHB4P54760 987 aa11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 TAS2R40P59535 323 aa11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 CENPCQ03188 943 aa11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 CACNB2Q08289 660 aaPredicted RBP11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 IFFO1Q0D2I5 559 aa11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 MTM1Q13496 603 aa11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 KCNA10Q16322 511 aa11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 GDF6Q6KF10 455 aaPredicted RBP11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 WDR93Q6P2C0 686 aa11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 B4GALNT4Q76KP1 1039 aa11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 SLFN11Q7Z7L1 901 aa11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 TSPAN16Q9UKR8 245 aa11.44□□□□□ -0.58
CSPG4P5-201ENST00000558731 SMIM35A0A1B0GVV1 85 aa11.43□□□□□ -0.58
CSPG4P5-201ENST00000558731 TARSL2A2RTX5 802 aaKnown RBP11.43□□□□□ -0.58
CSPG4P5-201ENST00000558731 MICAL2O94851 1124 aa11.43□□□□□ -0.58
CSPG4P5-201ENST00000558731 MAP3K6O95382 1288 aa11.43□□□□□ -0.58
CSPG4P5-201ENST00000558731 CALB1P05937 261 aa11.43□□□□□ -0.58
CSPG4P5-201ENST00000558731 LCP1P13796 627 aa11.43□□□□□ -0.58
CSPG4P5-201ENST00000558731 CCDC142Q17RM4 750 aa11.43□□□□□ -0.58
CSPG4P5-201ENST00000558731 PTPN20Q4JDL3 420 aa11.43□□□□□ -0.58
CSPG4P5-201ENST00000558731 ICE2Q659A1 982 aa11.43□□□□□ -0.58
CSPG4P5-201ENST00000558731 TTC19Q6DKK2 380 aaPredicted RBP11.43□□□□□ -0.58
CSPG4P5-201ENST00000558731 C11orf63Q6NUN7 778 aa11.43□□□□□ -0.58
CSPG4P5-201ENST00000558731 PRUNE1Q86TP1 453 aa11.43□□□□□ -0.58
CSPG4P5-201ENST00000558731 TRMT13Q9NUP7 481 aaKnown RBP11.43□□□□□ -0.58
CSPG4P5-201ENST00000558731 RASAL2Q9UJF2 1139 aa11.43□□□□□ -0.58
CSPG4P5-201ENST00000558731 ST3GAL5Q9UNP4 418 aa11.43□□□□□ -0.58
CSPG4P5-201ENST00000558731 STXBP5LQ9Y2K9 1186 aa11.43□□□□□ -0.58
CSPG4P5-201ENST00000558731 DUSP11O75319 330 aaKnown RBP11.43□□□□□ -0.58
CSPG4P5-201ENST00000558731 GPR32O75388 356 aa11.43□□□□□ -0.58
CSPG4P5-201ENST00000558731 RFC1P35251 1148 aaPredicted RBP11.43□□□□□ -0.58
CSPG4P5-201ENST00000558731 RAD23BP54727 409 aa11.43□□□□□ -0.58
CSPG4P5-201ENST00000558731 MON1BQ7L1V2 547 aa11.43□□□□□ -0.58
CSPG4P5-201ENST00000558731 OR2W6PQ8NHA6 318 aa11.43□□□□□ -0.58
CSPG4P5-201ENST00000558731 EXOC4Q96A65 974 aa11.43□□□□□ -0.58
CSPG4P5-201ENST00000558731 CPXM1Q96SM3 734 aa11.43□□□□□ -0.58
CSPG4P5-201ENST00000558731 ADAMTS10Q9H324 1103 aa11.43□□□□□ -0.58
CSPG4P5-201ENST00000558731 IPPQ9Y573 584 aa11.43□□□□□ -0.58
CSPG4P5-201ENST00000558731 TRIP12Q14669 1992 aaPredicted RBP11.43□□□□□ -0.58
CSPG4P5-201ENST00000558731 CCDC188H7C350 402 aa11.43□□□□□ -0.58
CSPG4P5-201ENST00000558731 CCDC130P13994 396 aa11.43□□□□□ -0.58
CSPG4P5-201ENST00000558731 CD52P31358 61 aa11.43□□□□□ -0.58
CSPG4P5-201ENST00000558731 GRM5P41594 1212 aa11.43□□□□□ -0.58
CSPG4P5-201ENST00000558731 RABGGTBP53611 331 aa11.43□□□□□ -0.58
CSPG4P5-201ENST00000558731 NOGQ13253 232 aa11.43□□□□□ -0.58
CSPG4P5-201ENST00000558731 PTGISQ16647 500 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms