RNA–Protein interactions for RNA: ENST00000558469.5

CUX1-216, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-216ENST00000558469 BARX2Q9UMQ3 279 aaPredicted RBP10.26□□□□□ -0.77
CUX1-216ENST00000558469 MTCL1Q9Y4B5 1905 aaKnown RBP10.26□□□□□ -0.77
CUX1-216ENST00000558469 PLXNA3P51805 1871 aa10.25□□□□□ -0.77
CUX1-216ENST00000558469 A0A1W2PPC1 479 aa10.25□□□□□ -0.77
CUX1-216ENST00000558469 A8MXQ7 604 aa10.25□□□□□ -0.77
CUX1-216ENST00000558469 GOLGA6L6A8MZA4 724 aa10.25□□□□□ -0.77
CUX1-216ENST00000558469 AKR1B15C9JRZ8 316 aaPredicted RBP10.25□□□□□ -0.77
CUX1-216ENST00000558469 C2CD2LO14523 706 aa10.25□□□□□ -0.77
CUX1-216ENST00000558469 GABRDO14764 452 aa10.25□□□□□ -0.77
CUX1-216ENST00000558469 HCRTO43612 131 aa10.25□□□□□ -0.77
CUX1-216ENST00000558469 CILPO75339 1184 aa10.25□□□□□ -0.77
CUX1-216ENST00000558469 GFPT2O94808 682 aa10.25□□□□□ -0.77
CUX1-216ENST00000558469 CALCAP01258 141 aa10.25□□□□□ -0.77
CUX1-216ENST00000558469 ACAT1P24752 427 aaKnown RBP10.25□□□□□ -0.77
CUX1-216ENST00000558469 CA8P35219 290 aa10.25□□□□□ -0.77
CUX1-216ENST00000558469 KRT9P35527 623 aa10.25□□□□□ -0.77
CUX1-216ENST00000558469 SOX5P35711 763 aa10.25□□□□□ -0.77
CUX1-216ENST00000558469 STAT1P42224 750 aa10.25□□□□□ -0.77
CUX1-216ENST00000558469 RAD23BP54727 409 aa10.25□□□□□ -0.77
CUX1-216ENST00000558469 ARID5AQ03989 594 aa10.25□□□□□ -0.77
CUX1-216ENST00000558469 LRIT3Q3SXY7 679 aa10.25□□□□□ -0.77
CUX1-216ENST00000558469 SFMBT2Q5VUG0 894 aa10.25□□□□□ -0.77
CUX1-216ENST00000558469 PDXDC1Q6P996 788 aa10.25□□□□□ -0.77
CUX1-216ENST00000558469 PRSS55Q6UWB4 352 aaPredicted RBP10.25□□□□□ -0.77
CUX1-216ENST00000558469 FAM71AQ8IYT1 594 aa10.25□□□□□ -0.77
CUX1-216ENST00000558469 RNF168Q8IYW5 571 aaPredicted RBP10.25□□□□□ -0.77
CUX1-216ENST00000558469 RBBP8NLQ8NC74 664 aaPredicted RBP10.25□□□□□ -0.77
CUX1-216ENST00000558469 WHAMMQ8TF30 809 aa10.25□□□□□ -0.77
CUX1-216ENST00000558469 RIN2Q8WYP3 895 aaPredicted RBP10.25□□□□□ -0.77
CUX1-216ENST00000558469 TIFAQ96CG3 184 aa10.25□□□□□ -0.77
CUX1-216ENST00000558469 TMEM176AQ96HP8 235 aa10.25□□□□□ -0.77
CUX1-216ENST00000558469 HEXIM2Q96MH2 286 aaKnown RBP10.25□□□□□ -0.77
CUX1-216ENST00000558469 TWNKQ96RR1 684 aa10.25□□□□□ -0.77
CUX1-216ENST00000558469 C11orf84Q9BUA3 381 aaPredicted RBP10.25□□□□□ -0.77
CUX1-216ENST00000558469 HERC2P3Q9BVR0 1158 aa10.25□□□□□ -0.77
CUX1-216ENST00000558469 NT5C1AQ9BXI3 368 aa10.25□□□□□ -0.77
CUX1-216ENST00000558469 ELOVL4Q9GZR5 314 aa10.25□□□□□ -0.77
CUX1-216ENST00000558469 NUCKS1Q9H1E3 243 aaKnown RBP10.25□□□□□ -0.77
CUX1-216ENST00000558469 DPEP3Q9H4B8 488 aa10.25□□□□□ -0.77
CUX1-216ENST00000558469 FAM124BQ9H5Z6 455 aaPredicted RBP10.25□□□□□ -0.77
CUX1-216ENST00000558469 CHST7Q9NS84 486 aa10.25□□□□□ -0.77
CUX1-216ENST00000558469 STK39Q9UEW8 545 aa10.25□□□□□ -0.77
CUX1-216ENST00000558469 PUF60Q9UHX1 559 aaKnown RBP10.25□□□□□ -0.77
CUX1-216ENST00000558469 MYO6Q9UM54 1294 aa10.25□□□□□ -0.77
CUX1-216ENST00000558469 CNTN6Q9UQ52 1028 aa10.25□□□□□ -0.77
CUX1-216ENST00000558469 STXBP5LQ9Y2K9 1186 aa10.25□□□□□ -0.77
CUX1-216ENST00000558469 NME7Q9Y5B8 376 aa10.25□□□□□ -0.77
CUX1-216ENST00000558469 CHD7Q9P2D1 2997 aa10.25□□□□□ -0.77
CUX1-216ENST00000558469 TRANK1O15050 2925 aa10.24□□□□□ -0.77
CUX1-216ENST00000558469 H3BNC9 293 aa10.24□□□□□ -0.77
CUX1-216ENST00000558469 H7C4K7 107 aa10.24□□□□□ -0.77
CUX1-216ENST00000558469 CYP26A1O43174 497 aa10.24□□□□□ -0.77
CUX1-216ENST00000558469 MFAP3LO75121 409 aa10.24□□□□□ -0.77
CUX1-216ENST00000558469 ATP2C2O75185 946 aa10.24□□□□□ -0.77
CUX1-216ENST00000558469 OAZ2O95190 189 aa10.24□□□□□ -0.77
CUX1-216ENST00000558469 CSPG5O95196 566 aa10.24□□□□□ -0.77
CUX1-216ENST00000558469 URODP06132 367 aa10.24□□□□□ -0.77
CUX1-216ENST00000558469 DNAJB1P25685 340 aa10.24□□□□□ -0.77
CUX1-216ENST00000558469 CLCN1P35523 988 aa10.24□□□□□ -0.77
CUX1-216ENST00000558469 GLUD2P49448 558 aa10.24□□□□□ -0.77
CUX1-216ENST00000558469 PSMC1P62191 440 aaKnown RBP10.24□□□□□ -0.77
CUX1-216ENST00000558469 DSG1Q02413 1049 aa10.24□□□□□ -0.77
CUX1-216ENST00000558469 GPM6BQ13491 265 aa10.24□□□□□ -0.77
CUX1-216ENST00000558469 TSR1Q2NL82 804 aaKnown RBP10.24□□□□□ -0.77
CUX1-216ENST00000558469 CTXN3Q4LDR2 81 aa10.24□□□□□ -0.77
CUX1-216ENST00000558469 PRPF38BQ5VTL8 546 aaKnown RBP10.24□□□□□ -0.77
CUX1-216ENST00000558469 KIAA0319Q5VV43 1072 aa10.24□□□□□ -0.77
CUX1-216ENST00000558469 ANKS3Q6ZW76 656 aa10.24□□□□□ -0.77
CUX1-216ENST00000558469 TMC7Q7Z402 723 aa10.24□□□□□ -0.77
CUX1-216ENST00000558469 ACOT1Q86TX2 421 aa10.24□□□□□ -0.77
CUX1-216ENST00000558469 UNC93AQ86WB7 457 aa10.24□□□□□ -0.77
CUX1-216ENST00000558469 CNGA4Q8IV77 575 aa10.24□□□□□ -0.77
CUX1-216ENST00000558469 TC2NQ8N9U0 490 aa10.24□□□□□ -0.77
CUX1-216ENST00000558469 SLC4A11Q8NBS3 891 aa10.24□□□□□ -0.77
CUX1-216ENST00000558469 OR8K1Q8NGG5 319 aa10.24□□□□□ -0.77
CUX1-216ENST00000558469 LNX1Q8TBB1 728 aaPredicted RBP10.24□□□□□ -0.77
CUX1-216ENST00000558469 SPATA18Q8TC71 538 aa10.24□□□□□ -0.77
CUX1-216ENST00000558469 SPPL3Q8TCT6 385 aa10.24□□□□□ -0.77
CUX1-216ENST00000558469 POF1BQ8WVV4 589 aa10.24□□□□□ -0.77
CUX1-216ENST00000558469 AUTS2Q8WXX7 1259 aa10.24□□□□□ -0.77
CUX1-216ENST00000558469 ARNTL2Q8WYA1 636 aa10.24□□□□□ -0.77
CUX1-216ENST00000558469 LPIN3Q9BQK8 851 aa10.24□□□□□ -0.77
CUX1-216ENST00000558469 RTP3Q9BQQ7 232 aa10.24□□□□□ -0.77
CUX1-216ENST00000558469 ACBD6Q9BR61 282 aa10.24□□□□□ -0.77
CUX1-216ENST00000558469 DNAI2Q9GZS0 605 aa10.24□□□□□ -0.77
CUX1-216ENST00000558469 ZBP1Q9H171 429 aa10.24□□□□□ -0.77
CUX1-216ENST00000558469 ACP6Q9NPH0 428 aa10.24□□□□□ -0.77
CUX1-216ENST00000558469 LZTS1Q9Y250 596 aa10.24□□□□□ -0.77
CUX1-216ENST00000558469 LAMA3Q16787 3333 aa10.23□□□□□ -0.77
CUX1-216ENST00000558469 STK25O00506 426 aa10.23□□□□□ -0.77
CUX1-216ENST00000558469 GRM6O15303 877 aa10.23□□□□□ -0.77
CUX1-216ENST00000558469 CXCL14O95715 111 aa10.23□□□□□ -0.77
CUX1-216ENST00000558469 CCDC172P0C7W6 258 aa10.23□□□□□ -0.77
CUX1-216ENST00000558469 CD19P15391 556 aa10.23□□□□□ -0.77
CUX1-216ENST00000558469 FERP16591 822 aa10.23□□□□□ -0.77
CUX1-216ENST00000558469 PTPN1P18031 435 aaKnown RBP10.23□□□□□ -0.77
CUX1-216ENST00000558469 RPL17P18621 184 aaKnown RBP10.23□□□□□ -0.77
CUX1-216ENST00000558469 PCSK1P29120 753 aa10.23□□□□□ -0.77
CUX1-216ENST00000558469 CDR1P51861 262 aa10.23□□□□□ -0.77
CUX1-216ENST00000558469 ZNF132P52740 706 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms