RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 SNX9Q9Y5X1 595 aa16.26■□□□□ 0.19
AP4E1-202ENST00000558439 HAUS5O94927 633 aa16.25■□□□□ 0.19
AP4E1-202ENST00000558439 PDHA1P08559 390 aa16.25■□□□□ 0.19
AP4E1-202ENST00000558439 NUDT17P0C025 328 aa16.25■□□□□ 0.19
AP4E1-202ENST00000558439 ADORA2BP29275 332 aa16.25■□□□□ 0.19
AP4E1-202ENST00000558439 PHKA2P46019 1235 aa16.25■□□□□ 0.19
AP4E1-202ENST00000558439 GCLCP48506 637 aaPredicted RBP16.25■□□□□ 0.19
AP4E1-202ENST00000558439 TFDP3Q5H9I0 405 aa16.25■□□□□ 0.19
AP4E1-202ENST00000558439 DEPDC1BQ8WUY9 529 aa16.25■□□□□ 0.19
AP4E1-202ENST00000558439 CGRRF1Q99675 332 aa16.25■□□□□ 0.19
AP4E1-202ENST00000558439 KDM4CQ9H3R0 1056 aa16.25■□□□□ 0.19
AP4E1-202ENST00000558439 NUB1Q9Y5A7 615 aa16.25■□□□□ 0.19
AP4E1-202ENST00000558439 CCDC160A6NGH7 325 aa16.25■□□□□ 0.19
AP4E1-202ENST00000558439 ARL4AP40617 200 aa16.25■□□□□ 0.19
AP4E1-202ENST00000558439 PKN2Q16513 984 aaKnown RBP16.25■□□□□ 0.19
AP4E1-202ENST00000558439 LY6KQ17RY6 165 aa16.25■□□□□ 0.19
AP4E1-202ENST00000558439 HIPK4Q8NE63 616 aa16.25■□□□□ 0.19
AP4E1-202ENST00000558439 PLEKHO2Q8TD55 490 aa16.25■□□□□ 0.19
AP4E1-202ENST00000558439 PPP4R1Q8TF05 950 aa16.25■□□□□ 0.19
AP4E1-202ENST00000558439 GRAMD1AQ96CP6 724 aa16.25■□□□□ 0.19
AP4E1-202ENST00000558439 NUDCD1Q96RS6 583 aa16.25■□□□□ 0.19
AP4E1-202ENST00000558439 USH1CQ9Y6N9 552 aa16.25■□□□□ 0.19
AP4E1-202ENST00000558439 OGTO15294 1046 aa16.25■□□□□ 0.19
AP4E1-202ENST00000558439 PTGER2P43116 358 aa16.25■□□□□ 0.19
AP4E1-202ENST00000558439 ART4Q93070 314 aa16.25■□□□□ 0.19
AP4E1-202ENST00000558439 CYTH2Q99418 400 aa16.25■□□□□ 0.19
AP4E1-202ENST00000558439 FHDC1Q9C0D6 1143 aaPredicted RBP16.25■□□□□ 0.19
AP4E1-202ENST00000558439 SMYD2Q9NRG4 433 aa16.25■□□□□ 0.19
AP4E1-202ENST00000558439 GPATCH2LQ9NWQ4 482 aa16.25■□□□□ 0.19
AP4E1-202ENST00000558439 ZNF862O60290 1169 aa16.24■□□□□ 0.19
AP4E1-202ENST00000558439 BANF1O75531 89 aa16.24■□□□□ 0.19
AP4E1-202ENST00000558439 RAD23BP54727 409 aa16.24■□□□□ 0.19
AP4E1-202ENST00000558439 MAMLD1Q13495 774 aa16.24■□□□□ 0.19
AP4E1-202ENST00000558439 APOBEC3FQ8IUX4 373 aaKnown RBP16.24■□□□□ 0.19
AP4E1-202ENST00000558439 SNX25Q9H3E2 840 aa16.24■□□□□ 0.19
AP4E1-202ENST00000558439 GH1P01241 217 aa16.24■□□□□ 0.19
AP4E1-202ENST00000558439 AP3M2P53677 418 aa16.24■□□□□ 0.19
AP4E1-202ENST00000558439 NCKAP1LP55160 1127 aa16.24■□□□□ 0.19
AP4E1-202ENST00000558439 MXD4Q14582 209 aaPredicted RBP16.24■□□□□ 0.19
AP4E1-202ENST00000558439 PSMD6Q15008 389 aa16.24■□□□□ 0.19
AP4E1-202ENST00000558439 ZBTB41Q5SVQ8 909 aa16.24■□□□□ 0.19
AP4E1-202ENST00000558439 CNPY4Q8N129 248 aa16.24■□□□□ 0.19
AP4E1-202ENST00000558439 CDKL2Q92772 493 aa16.24■□□□□ 0.19
AP4E1-202ENST00000558439 LRRC19Q9H756 370 aa16.24■□□□□ 0.19
AP4E1-202ENST00000558439 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.24■□□□□ 0.19
AP4E1-202ENST00000558439 SMG5Q9UPR3 1016 aaKnown RBP16.24■□□□□ 0.19
AP4E1-202ENST00000558439 PLSCR1O15162 318 aa16.24■□□□□ 0.19
AP4E1-202ENST00000558439 TNFSF9P41273 254 aa16.24■□□□□ 0.19
AP4E1-202ENST00000558439 TAP1Q03518 808 aa16.24■□□□□ 0.19
AP4E1-202ENST00000558439 ITIH4Q14624 930 aa16.24■□□□□ 0.19
AP4E1-202ENST00000558439 FBXO36Q8NEA4 188 aa16.24■□□□□ 0.19
AP4E1-202ENST00000558439 OSBPL7Q9BZF2 842 aa16.24■□□□□ 0.19
AP4E1-202ENST00000558439 MAP3K20Q9NYL2 800 aaKnown RBP16.24■□□□□ 0.19
AP4E1-202ENST00000558439 NOCTQ9UK39 431 aaKnown RBP16.24■□□□□ 0.19
AP4E1-202ENST00000558439 UBR2Q8IWV8 1755 aa16.24■□□□□ 0.19
AP4E1-202ENST00000558439 DNM1LO00429 736 aa16.23■□□□□ 0.19
AP4E1-202ENST00000558439 FSCN2O14926 492 aa16.23■□□□□ 0.19
AP4E1-202ENST00000558439 ASAP2O43150 1006 aa16.23■□□□□ 0.19
AP4E1-202ENST00000558439 PDGFRBP09619 1106 aa16.23■□□□□ 0.19
AP4E1-202ENST00000558439 NQO1P15559 274 aaKnown RBP16.23■□□□□ 0.19
AP4E1-202ENST00000558439 CLEC4DQ8WXI8 215 aa16.23■□□□□ 0.19
AP4E1-202ENST00000558439 NCAPGQ9BPX3 1015 aa16.23■□□□□ 0.19
AP4E1-202ENST00000558439 POLIQ9UNA4 740 aa16.23■□□□□ 0.19
AP4E1-202ENST00000558439 GLRA2P23416 452 aa16.23■□□□□ 0.19
AP4E1-202ENST00000558439 EXOC8Q8IYI6 725 aa16.23■□□□□ 0.19
AP4E1-202ENST00000558439 SMC1BQ8NDV3 1235 aa16.23■□□□□ 0.19
AP4E1-202ENST00000558439 DTX3LQ8TDB6 740 aa16.23■□□□□ 0.19
AP4E1-202ENST00000558439 GRHL1Q9NZI5 618 aa16.23■□□□□ 0.19
AP4E1-202ENST00000558439 SENP1Q9P0U3 644 aa16.23■□□□□ 0.19
AP4E1-202ENST00000558439 CXCL8P10145 99 aa16.23■□□□□ 0.19
AP4E1-202ENST00000558439 DSG3P32926 999 aa16.23■□□□□ 0.19
AP4E1-202ENST00000558439 RFC5P40937 340 aa16.23■□□□□ 0.19
AP4E1-202ENST00000558439 SLC20A2Q08357 652 aa16.23■□□□□ 0.19
AP4E1-202ENST00000558439 PTK7Q13308 1070 aa16.23■□□□□ 0.19
AP4E1-202ENST00000558439 PLCB4Q15147 1175 aa16.23■□□□□ 0.19
AP4E1-202ENST00000558439 ZACNQ401N2 412 aa16.23■□□□□ 0.19
AP4E1-202ENST00000558439 IER5Q5VY09 327 aa16.23■□□□□ 0.19
AP4E1-202ENST00000558439 LONP2Q86WA8 852 aa16.23■□□□□ 0.19
AP4E1-202ENST00000558439 ATXN7L3BQ96GX2 97 aa16.23■□□□□ 0.19
AP4E1-202ENST00000558439 AVENQ9NQS1 362 aaPredicted RBP16.23■□□□□ 0.19
AP4E1-202ENST00000558439 SYNPO2Q9UMS6 1093 aa16.23■□□□□ 0.19
AP4E1-202ENST00000558439 ZC3H4Q9UPT8 1303 aaKnown RBP16.23■□□□□ 0.19
AP4E1-202ENST00000558439 STRCP1A6NGW2 1772 aa16.23■□□□□ 0.19
AP4E1-202ENST00000558439 E2F8A0AVK6 867 aa16.23■□□□□ 0.19
AP4E1-202ENST00000558439 KLRG2A4D1S0 409 aaPredicted RBP16.23■□□□□ 0.19
AP4E1-202ENST00000558439 CREB3O43889 395 aa16.23■□□□□ 0.19
AP4E1-202ENST00000558439 SNX3O60493 162 aa16.23■□□□□ 0.19
AP4E1-202ENST00000558439 LCP1P13796 627 aa16.23■□□□□ 0.19
AP4E1-202ENST00000558439 PTGIRP43119 386 aa16.23■□□□□ 0.19
AP4E1-202ENST00000558439 MMP13P45452 471 aa16.23■□□□□ 0.19
AP4E1-202ENST00000558439 CPA2P48052 419 aa16.23■□□□□ 0.19
AP4E1-202ENST00000558439 IREB2P48200 963 aaKnown RBP16.23■□□□□ 0.19
AP4E1-202ENST00000558439 SESN2P58004 480 aaPredicted RBP16.23■□□□□ 0.19
AP4E1-202ENST00000558439 NFIL3Q16649 462 aa16.23■□□□□ 0.19
AP4E1-202ENST00000558439 FAM182AQ5T1J6 154 aa16.23■□□□□ 0.19
AP4E1-202ENST00000558439 NXNQ6DKJ4 435 aa16.23■□□□□ 0.19
AP4E1-202ENST00000558439 ZDHHC24Q6UX98 284 aa16.23■□□□□ 0.19
AP4E1-202ENST00000558439 NSMCE1Q8WV22 266 aa16.23■□□□□ 0.19
AP4E1-202ENST00000558439 SLC12A6Q9UHW9 1150 aa16.23■□□□□ 0.19
AP4E1-202ENST00000558439 RNASELQ05823 741 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms