RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 C10orf88Q9H8K7 445 aa11.18□□□□□ -0.62
TPM1-210ENST00000558264 SAE1Q9UBE0 346 aaPredicted RBP11.18□□□□□ -0.62
TPM1-210ENST00000558264 MTRF1LQ9UGC7 380 aaKnown RBP11.18□□□□□ -0.62
TPM1-210ENST00000558264 IP6K2Q9UHH9 426 aa11.18□□□□□ -0.62
TPM1-210ENST00000558264 PPEF2O14830 753 aa11.17□□□□□ -0.62
TPM1-210ENST00000558264 DYNC1LI2O43237 492 aaPredicted RBP11.17□□□□□ -0.62
TPM1-210ENST00000558264 PSTPIP1O43586 416 aa11.17□□□□□ -0.62
TPM1-210ENST00000558264 CALB1P05937 261 aa11.17□□□□□ -0.62
TPM1-210ENST00000558264 ZSCAN5DPP0CG00 497 aa11.17□□□□□ -0.62
TPM1-210ENST00000558264 ADCY8P40145 1251 aa11.17□□□□□ -0.62
TPM1-210ENST00000558264 SKOR1P84550 965 aa11.17□□□□□ -0.62
TPM1-210ENST00000558264 NFX1Q12986 1120 aaKnown RBP11.17□□□□□ -0.62
TPM1-210ENST00000558264 KLF1Q13351 362 aaPredicted RBP11.17□□□□□ -0.62
TPM1-210ENST00000558264 ACVR2BQ13705 512 aa11.17□□□□□ -0.62
TPM1-210ENST00000558264 CHADLQ6NUI6 762 aa11.17□□□□□ -0.62
TPM1-210ENST00000558264 ILDR2Q71H61 639 aa11.17□□□□□ -0.62
TPM1-210ENST00000558264 GSTA5Q7RTV2 222 aa11.17□□□□□ -0.62
TPM1-210ENST00000558264 PNMA8AQ86V59 439 aaPredicted RBP11.17□□□□□ -0.62
TPM1-210ENST00000558264 TAB3Q8N5C8 712 aaPredicted RBP11.17□□□□□ -0.62
TPM1-210ENST00000558264 LINC01465Q8N7H1 131 aa11.17□□□□□ -0.62
TPM1-210ENST00000558264 MDM1Q8TC05 714 aa11.17□□□□□ -0.62
TPM1-210ENST00000558264 ART4Q93070 314 aa11.17□□□□□ -0.62
TPM1-210ENST00000558264 PABPC3Q9H361 631 aaKnown RBP11.17□□□□□ -0.62
TPM1-210ENST00000558264 GBA2Q9HCG7 927 aaPredicted RBP11.17□□□□□ -0.62
TPM1-210ENST00000558264 PPANQ9NQ55 473 aaKnown RBP11.17□□□□□ -0.62
TPM1-210ENST00000558264 CEP83Q9Y592 693 aa11.17□□□□□ -0.62
TPM1-210ENST00000558264 ANK1P16157 1881 aa11.17□□□□□ -0.62
TPM1-210ENST00000558264 TCRBV5S1A1TA0A578 114 aa11.17□□□□□ -0.62
TPM1-210ENST00000558264 LRRD1A4D1F6 860 aa11.17□□□□□ -0.62
TPM1-210ENST00000558264 FOXO6A8MYZ6 492 aa11.17□□□□□ -0.62
TPM1-210ENST00000558264 NPTXRO95502 500 aa11.17□□□□□ -0.62
TPM1-210ENST00000558264 ERBB2P04626 1255 aa11.17□□□□□ -0.62
TPM1-210ENST00000558264 ETS1P14921 441 aa11.17□□□□□ -0.62
TPM1-210ENST00000558264 LSP1P33241 339 aa11.17□□□□□ -0.62
TPM1-210ENST00000558264 ITGA8P53708 1063 aa11.17□□□□□ -0.62
TPM1-210ENST00000558264 DRG2P55039 364 aaKnown RBP11.17□□□□□ -0.62
TPM1-210ENST00000558264 PSMC1P62191 440 aaKnown RBP11.17□□□□□ -0.62
TPM1-210ENST00000558264 TMEM132DQ14C87 1099 aa11.17□□□□□ -0.62
TPM1-210ENST00000558264 KATNAL2Q8IYT4 538 aa11.17□□□□□ -0.62
TPM1-210ENST00000558264 C12orf29Q8N999 325 aa11.17□□□□□ -0.62
TPM1-210ENST00000558264 SLC4A11Q8NBS3 891 aa11.17□□□□□ -0.62
TPM1-210ENST00000558264 KIF12Q96FN5 646 aa11.17□□□□□ -0.62
TPM1-210ENST00000558264 HPDLQ96IR7 371 aa11.17□□□□□ -0.62
TPM1-210ENST00000558264 HEXIM2Q96MH2 286 aaKnown RBP11.17□□□□□ -0.62
TPM1-210ENST00000558264 TINF2Q9BSI4 451 aa11.17□□□□□ -0.62
TPM1-210ENST00000558264 METTL5Q9NRN9 209 aaKnown RBP11.17□□□□□ -0.62
TPM1-210ENST00000558264 PCSK1NQ9UHG2 260 aa11.17□□□□□ -0.62
TPM1-210ENST00000558264 M0QYV0 167 aa11.16□□□□□ -0.62
TPM1-210ENST00000558264 MAGEB2O15479 319 aa11.16□□□□□ -0.62
TPM1-210ENST00000558264 PPFIA4O75335 1185 aa11.16□□□□□ -0.62
TPM1-210ENST00000558264 IL18RAPO95256 599 aa11.16□□□□□ -0.62
TPM1-210ENST00000558264 MCF2P10911 925 aa11.16□□□□□ -0.62
TPM1-210ENST00000558264 PSMA2P25787 234 aa11.16□□□□□ -0.62
TPM1-210ENST00000558264 SF3A3Q12874 501 aaKnown RBP eCLIP11.16□□□□□ -0.629e-9■■■■□ 23.4
TPM1-210ENST00000558264 CCDC38Q502W7 563 aa11.16□□□□□ -0.62
TPM1-210ENST00000558264 RAB6CQ53S08 254 aa11.16□□□□□ -0.62
TPM1-210ENST00000558264 HP1BP3Q5SSJ5 553 aaPredicted RBP11.16□□□□□ -0.62
TPM1-210ENST00000558264 CXorf38Q8TB03 319 aa11.16□□□□□ -0.62
TPM1-210ENST00000558264 OSMRQ99650 979 aa11.16□□□□□ -0.62
TPM1-210ENST00000558264 LPIN3Q9BQK8 851 aa11.16□□□□□ -0.62
TPM1-210ENST00000558264 EIF2AQ9BY44 585 aaKnown RBP11.16□□□□□ -0.62
TPM1-210ENST00000558264 RAB6CQ9H0N0 254 aa11.16□□□□□ -0.62
TPM1-210ENST00000558264 AAASQ9NRG9 546 aa11.16□□□□□ -0.62
TPM1-210ENST00000558264 DNPEPQ9ULA0 475 aa11.16□□□□□ -0.62
TPM1-210ENST00000558264 HCRTO43612 131 aa11.16□□□□□ -0.62
TPM1-210ENST00000558264 RPS6KA5O75582 802 aa11.16□□□□□ -0.62
TPM1-210ENST00000558264 GRAP2O75791 330 aa11.16□□□□□ -0.62
TPM1-210ENST00000558264 MICAL2O94851 1124 aa11.16□□□□□ -0.62
TPM1-210ENST00000558264 LSM8O95777 96 aaKnown RBP11.16□□□□□ -0.62
TPM1-210ENST00000558264 IVLP07476 585 aa11.16□□□□□ -0.62
TPM1-210ENST00000558264 ATF2P15336 505 aa11.16□□□□□ -0.62
TPM1-210ENST00000558264 IFI35P80217 286 aaPredicted RBP11.16□□□□□ -0.62
TPM1-210ENST00000558264 PTPN11Q06124 597 aaPredicted RBP11.16□□□□□ -0.62
TPM1-210ENST00000558264 GRB14Q14449 540 aa11.16□□□□□ -0.62
TPM1-210ENST00000558264 RUFY4Q6ZNE9 571 aa11.16□□□□□ -0.62
TPM1-210ENST00000558264 B4GALNT4Q76KP1 1039 aa11.16□□□□□ -0.62
TPM1-210ENST00000558264 PLEKHH3Q7Z736 793 aa11.16□□□□□ -0.62
TPM1-210ENST00000558264 SLITRK1Q96PX8 696 aa11.16□□□□□ -0.62
TPM1-210ENST00000558264 BCO2Q9BYV7 579 aa11.16□□□□□ -0.62
TPM1-210ENST00000558264 CDC42EP4Q9H3Q1 356 aaKnown RBP11.16□□□□□ -0.62
TPM1-210ENST00000558264 SNTG2Q9NY99 539 aa11.16□□□□□ -0.62
TPM1-210ENST00000558264 CWC15Q9P013 229 aaKnown RBP11.16□□□□□ -0.62
TPM1-210ENST00000558264 RIPK2O43353 540 aa11.15□□□□□ -0.62
TPM1-210ENST00000558264 KRT3P12035 628 aa11.15□□□□□ -0.62
TPM1-210ENST00000558264 EIF4BP23588 611 aaKnown RBP11.15□□□□□ -0.62
TPM1-210ENST00000558264 IVDP26440 423 aa11.15□□□□□ -0.62
TPM1-210ENST00000558264 IL1R2P27930 398 aa11.15□□□□□ -0.62
TPM1-210ENST00000558264 MDH1P40925 334 aaKnown RBP11.15□□□□□ -0.62
TPM1-210ENST00000558264 NDST1P52848 882 aa11.15□□□□□ -0.62
TPM1-210ENST00000558264 ZNF200P98182 395 aaPredicted RBP11.15□□□□□ -0.62
TPM1-210ENST00000558264 HIC1Q14526 733 aa11.15□□□□□ -0.62
TPM1-210ENST00000558264 TAF5Q15542 800 aa11.15□□□□□ -0.62
TPM1-210ENST00000558264 CCL14Q16627 93 aa11.15□□□□□ -0.62
TPM1-210ENST00000558264 DUSP28Q4G0W2 176 aa11.15□□□□□ -0.62
TPM1-210ENST00000558264 ZNF365Q70YC5 407 aa11.15□□□□□ -0.62
TPM1-210ENST00000558264 ARFGAP1Q8N6T3 406 aa11.15□□□□□ -0.62
TPM1-210ENST00000558264 EXD1Q8NHP7 514 aa11.15□□□□□ -0.62
TPM1-210ENST00000558264 PIWIL1Q96J94 861 aaKnown RBP11.15□□□□□ -0.62
TPM1-210ENST00000558264 ACAP3Q96P50 834 aa11.15□□□□□ -0.62
TPM1-210ENST00000558264 RRAGCQ9HB90 399 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms