RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 IQCB1Q15051 598 aa12.94□□□□□ -0.34
HMGB1P8-201ENST00000558211 UPP1Q16831 310 aa12.94□□□□□ -0.34
HMGB1P8-201ENST00000558211 C9orf57Q5W0N0 161 aa12.94□□□□□ -0.34
HMGB1P8-201ENST00000558211 TMEM173Q86WV6 379 aaPredicted RBP12.94□□□□□ -0.34
HMGB1P8-201ENST00000558211 C1orf127Q8N9H9 656 aa12.94□□□□□ -0.34
HMGB1P8-201ENST00000558211 KLHL23Q8NBE8 558 aa12.94□□□□□ -0.34
HMGB1P8-201ENST00000558211 RNF214Q8ND24 703 aa12.94□□□□□ -0.34
HMGB1P8-201ENST00000558211 ZDHHC1Q8WTX9 485 aa12.94□□□□□ -0.34
HMGB1P8-201ENST00000558211 TMEM169Q96HH4 297 aa12.94□□□□□ -0.34
HMGB1P8-201ENST00000558211 UROC1Q96N76 676 aa12.94□□□□□ -0.34
HMGB1P8-201ENST00000558211 TIMMDC1Q9NPL8 285 aa12.94□□□□□ -0.34
HMGB1P8-201ENST00000558211 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.94□□□□□ -0.34
HMGB1P8-201ENST00000558211 SPG21Q9NZD8 308 aa12.94□□□□□ -0.34
HMGB1P8-201ENST00000558211 RWDD3Q9Y3V2 267 aa12.94□□□□□ -0.34
HMGB1P8-201ENST00000558211 NUB1Q9Y5A7 615 aa12.94□□□□□ -0.34
HMGB1P8-201ENST00000558211 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.94□□□□□ -0.34
HMGB1P8-201ENST00000558211 SCN1AP35498 2009 aa12.94□□□□□ -0.34
HMGB1P8-201ENST00000558211 GOLGA6L19H0YKK7 550 aa12.93□□□□□ -0.34
HMGB1P8-201ENST00000558211 I3L4J1 428 aa12.93□□□□□ -0.34
HMGB1P8-201ENST00000558211 RFXAPO00287 272 aa12.93□□□□□ -0.34
HMGB1P8-201ENST00000558211 IKBKBO14920 756 aa12.93□□□□□ -0.34
HMGB1P8-201ENST00000558211 STX10O60499 249 aa12.93□□□□□ -0.34
HMGB1P8-201ENST00000558211 FGF18O76093 207 aa12.93□□□□□ -0.34
HMGB1P8-201ENST00000558211 KIF4AO95239 1232 aa12.93□□□□□ -0.34
HMGB1P8-201ENST00000558211 CST3P01034 146 aaPredicted RBP12.93□□□□□ -0.34
HMGB1P8-201ENST00000558211 C4BPAP04003 597 aaKnown RBP12.93□□□□□ -0.34
HMGB1P8-201ENST00000558211 ITGB1P05556 798 aa12.93□□□□□ -0.34
HMGB1P8-201ENST00000558211 LRPAP1P30533 357 aa12.93□□□□□ -0.34
HMGB1P8-201ENST00000558211 RPL9P32969 192 aaKnown RBP12.93□□□□□ -0.34
HMGB1P8-201ENST00000558211 BRCC3P46736 316 aa12.93□□□□□ -0.34
HMGB1P8-201ENST00000558211 AP3M2P53677 418 aa12.93□□□□□ -0.34
HMGB1P8-201ENST00000558211 RBP5P82980 135 aa12.93□□□□□ -0.34
HMGB1P8-201ENST00000558211 TEAD4Q15561 434 aa12.93□□□□□ -0.34
HMGB1P8-201ENST00000558211 TCP11X2Q5H9J9 407 aa12.93□□□□□ -0.34
HMGB1P8-201ENST00000558211 HABP4Q5JVS0 413 aaKnown RBP12.93□□□□□ -0.34
HMGB1P8-201ENST00000558211 TDRD10Q5VZ19 366 aaKnown RBP12.93□□□□□ -0.34
HMGB1P8-201ENST00000558211 DCLRE1AQ6PJP8 1040 aa12.93□□□□□ -0.34
HMGB1P8-201ENST00000558211 SV2AQ7L0J3 742 aa12.93□□□□□ -0.34
HMGB1P8-201ENST00000558211 TRIM59Q8IWR1 403 aa12.93□□□□□ -0.34
HMGB1P8-201ENST00000558211 SLC39A11Q8N1S5 342 aa12.93□□□□□ -0.34
HMGB1P8-201ENST00000558211 C3orf58Q8NDZ4 430 aa12.93□□□□□ -0.34
HMGB1P8-201ENST00000558211 BCL7CQ8WUZ0 217 aaPredicted RBP12.93□□□□□ -0.34
HMGB1P8-201ENST00000558211 SLC35C1Q96A29 364 aa12.93□□□□□ -0.34
HMGB1P8-201ENST00000558211 ELMO3Q96BJ8 720 aa12.93□□□□□ -0.34
HMGB1P8-201ENST00000558211 IGSF21Q96ID5 467 aa12.93□□□□□ -0.34
HMGB1P8-201ENST00000558211 FAM161BQ96MY7 647 aa12.93□□□□□ -0.34
HMGB1P8-201ENST00000558211 SAMD11Q96NU1 681 aa12.93□□□□□ -0.34
HMGB1P8-201ENST00000558211 ZNF576Q9H609 170 aa12.93□□□□□ -0.34
HMGB1P8-201ENST00000558211 ALG13Q9NP73 1137 aaKnown RBP12.93□□□□□ -0.34
HMGB1P8-201ENST00000558211 MARCH5Q9NX47 278 aa12.93□□□□□ -0.34
HMGB1P8-201ENST00000558211 TAB2Q9NYJ8 693 aa12.93□□□□□ -0.34
HMGB1P8-201ENST00000558211 SIX4Q9UIU6 781 aa12.93□□□□□ -0.34
HMGB1P8-201ENST00000558211 ITGA11Q9UKX5 1188 aa12.93□□□□□ -0.34
HMGB1P8-201ENST00000558211 PIRO00625 290 aa12.92□□□□□ -0.34
HMGB1P8-201ENST00000558211 CAVIN2O95810 425 aa12.92□□□□□ -0.34
HMGB1P8-201ENST00000558211 CA8P35219 290 aa12.92□□□□□ -0.34
HMGB1P8-201ENST00000558211 PPM1AP35813 382 aa12.92□□□□□ -0.34
HMGB1P8-201ENST00000558211 PIK3CAP42336 1068 aa12.92□□□□□ -0.34
HMGB1P8-201ENST00000558211 MXI1P50539 228 aa12.92□□□□□ -0.34
HMGB1P8-201ENST00000558211 MARSP56192 900 aaKnown RBP12.92□□□□□ -0.34
HMGB1P8-201ENST00000558211 TPM4P67936 248 aa12.92□□□□□ -0.34
HMGB1P8-201ENST00000558211 KRT17Q04695 432 aa12.92□□□□□ -0.34
HMGB1P8-201ENST00000558211 GPM6BQ13491 265 aa12.92□□□□□ -0.34
HMGB1P8-201ENST00000558211 CBWD6Q4V339 395 aa12.92□□□□□ -0.34
HMGB1P8-201ENST00000558211 CBWD3Q5JTY5 395 aa12.92□□□□□ -0.34
HMGB1P8-201ENST00000558211 TBCELQ5QJ74 424 aa12.92□□□□□ -0.34
HMGB1P8-201ENST00000558211 CBWD5Q5RIA9 395 aa12.92□□□□□ -0.34
HMGB1P8-201ENST00000558211 CDKAL1Q5VV42 579 aa12.92□□□□□ -0.34
HMGB1P8-201ENST00000558211 KRT39Q6A163 491 aa12.92□□□□□ -0.34
HMGB1P8-201ENST00000558211 DSTYKQ6XUX3 929 aa12.92□□□□□ -0.34
HMGB1P8-201ENST00000558211 TUBGCP2Q9BSJ2 902 aa12.92□□□□□ -0.34
HMGB1P8-201ENST00000558211 VPS16Q9H269 839 aa12.92□□□□□ -0.34
HMGB1P8-201ENST00000558211 PLXNA4Q9HCM2 1894 aa12.92□□□□□ -0.34
HMGB1P8-201ENST00000558211 TMEM8AQ9HCN3 771 aa12.92□□□□□ -0.34
HMGB1P8-201ENST00000558211 ADAM28Q9UKQ2 775 aa12.92□□□□□ -0.34
HMGB1P8-201ENST00000558211 LAMA2P24043 3122 aaKnown RBP12.92□□□□□ -0.34
HMGB1P8-201ENST00000558211 A0A1B0GTH6 734 aa12.91□□□□□ -0.34
HMGB1P8-201ENST00000558211 ANO9A1A5B4 782 aa12.91□□□□□ -0.34
HMGB1P8-201ENST00000558211 EPOPA6NHQ4 379 aa12.91□□□□□ -0.34
HMGB1P8-201ENST00000558211 VNN1O95497 513 aa12.91□□□□□ -0.34
HMGB1P8-201ENST00000558211 HLA-DRAP01903 254 aa12.91□□□□□ -0.34
HMGB1P8-201ENST00000558211 AFPP02771 609 aaKnown RBP12.91□□□□□ -0.34
HMGB1P8-201ENST00000558211 RB1P06400 928 aa12.91□□□□□ -0.34
HMGB1P8-201ENST00000558211 ATP1A3P13637 1013 aa12.91□□□□□ -0.34
HMGB1P8-201ENST00000558211 EEF1GP26641 437 aaKnown RBP12.91□□□□□ -0.34
HMGB1P8-201ENST00000558211 GTF2H1P32780 548 aa12.91□□□□□ -0.34
HMGB1P8-201ENST00000558211 PLA2G4AP47712 749 aa12.91□□□□□ -0.34
HMGB1P8-201ENST00000558211 FMO5P49326 533 aa12.91□□□□□ -0.34
HMGB1P8-201ENST00000558211 TAF6P49848 677 aa12.91□□□□□ -0.34
HMGB1P8-201ENST00000558211 MYL6P60660 151 aa12.91□□□□□ -0.34
HMGB1P8-201ENST00000558211 MYL7Q01449 175 aa12.91□□□□□ -0.34
HMGB1P8-201ENST00000558211 ENPEPQ07075 957 aa12.91□□□□□ -0.34
HMGB1P8-201ENST00000558211 MAN2A1Q16706 1144 aa12.91□□□□□ -0.34
HMGB1P8-201ENST00000558211 SWI5Q1ZZU3 235 aa12.91□□□□□ -0.34
HMGB1P8-201ENST00000558211 ZACNQ401N2 412 aa12.91□□□□□ -0.34
HMGB1P8-201ENST00000558211 FUT10Q6P4F1 479 aa12.91□□□□□ -0.34
HMGB1P8-201ENST00000558211 CD300LGQ6UXG3 332 aa12.91□□□□□ -0.34
HMGB1P8-201ENST00000558211 TAS1R1Q7RTX1 841 aa12.91□□□□□ -0.34
HMGB1P8-201ENST00000558211 CEP57Q86XR8 500 aa12.91□□□□□ -0.34
HMGB1P8-201ENST00000558211 ANKRD20A12PQ8NF67 263 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms