RNA–Protein interactions for RNA: ENST00000557829.1

CPNE6-204, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-204ENST00000557829 RBM15Q96T37 977 aaKnown RBP eCLIP13.95□□□□□ -0.18
CPNE6-204ENST00000557829 TRIM6Q9C030 488 aaPredicted RBP13.95□□□□□ -0.18
CPNE6-204ENST00000557829 CNTN6Q9UQ52 1028 aa13.95□□□□□ -0.18
CPNE6-204ENST00000557829 MAFGO15525 162 aa13.94□□□□□ -0.18
CPNE6-204ENST00000557829 RGS20O76081 388 aa13.94□□□□□ -0.18
CPNE6-204ENST00000557829 CCNE2O96020 404 aa13.94□□□□□ -0.18
CPNE6-204ENST00000557829 CCND2P30279 289 aa13.94□□□□□ -0.18
CPNE6-204ENST00000557829 FOXN2P32314 431 aa13.94□□□□□ -0.18
CPNE6-204ENST00000557829 POLGP54098 1239 aaPredicted RBP13.94□□□□□ -0.18
CPNE6-204ENST00000557829 WDR4P57081 412 aaKnown RBP13.94□□□□□ -0.18
CPNE6-204ENST00000557829 MCL1Q07820 350 aa13.94□□□□□ -0.18
CPNE6-204ENST00000557829 MAMLD1Q13495 774 aa13.94□□□□□ -0.18
CPNE6-204ENST00000557829 SPARCL1Q14515 664 aa13.94□□□□□ -0.18
CPNE6-204ENST00000557829 SETDB1Q15047 1291 aa13.94□□□□□ -0.18
CPNE6-204ENST00000557829 ZACNQ401N2 412 aa13.94□□□□□ -0.18
CPNE6-204ENST00000557829 ANO5Q75V66 913 aa13.94□□□□□ -0.18
CPNE6-204ENST00000557829 ABRAQ8N0Z2 381 aa13.94□□□□□ -0.18
CPNE6-204ENST00000557829 AGGF1Q8N302 714 aaeCLIP13.94□□□□□ -0.18
CPNE6-204ENST00000557829 ZNF516Q92618 1163 aa13.94□□□□□ -0.18
CPNE6-204ENST00000557829 RBM41Q96IZ5 413 aaKnown RBP13.94□□□□□ -0.18
CPNE6-204ENST00000557829 RMDN2Q96LZ7 410 aa13.94□□□□□ -0.18
CPNE6-204ENST00000557829 TMEM237Q96Q45 408 aa13.94□□□□□ -0.18
CPNE6-204ENST00000557829 SSU72Q9NP77 194 aaKnown RBP13.94□□□□□ -0.18
CPNE6-204ENST00000557829 PDLIM7Q9NR12 457 aa13.94□□□□□ -0.18
CPNE6-204ENST00000557829 IP6K2Q9UHH9 426 aa13.94□□□□□ -0.18
CPNE6-204ENST00000557829 USH1CQ9Y6N9 552 aa13.94□□□□□ -0.18
CPNE6-204ENST00000557829 MYH9P35579 1960 aaKnown RBP13.94□□□□□ -0.18
CPNE6-204ENST00000557829 GSTTP1A0A1W2PQM5 241 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 TMEM150BA6NC51 233 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 SOWAHBA6NEL2 793 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 C4BPAP04003 597 aaKnown RBP13.93□□□□□ -0.18
CPNE6-204ENST00000557829 PGK2P07205 417 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 PTPN7P35236 360 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 VEGFBP49765 207 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 TAS2R40P59535 323 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 NOMO3P69849 1222 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 MGAT5Q09328 741 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 MYO1EQ12965 1108 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 LLGL1Q15334 1064 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 LRRC38Q5VT99 294 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 WDR78Q5VTH9 848 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 PLA2G4FQ68DD2 849 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 FEZF2Q8TBJ5 459 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 BSNDQ8WZ55 320 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 INPP5DQ92835 1189 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 C9orf72Q96LT7 481 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 PHACTR1Q9C0D0 580 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 MAF1Q9H063 256 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 MLXIPLQ9NP71 852 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 DNAJC17Q9NVM6 304 aaKnown RBP13.93□□□□□ -0.18
CPNE6-204ENST00000557829 ADAM22Q9P0K1 906 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 FETUBQ9UGM5 382 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 SLC24A2Q9UI40 661 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 GGT7Q9UJ14 662 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 PCDHA10Q9Y5I2 948 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 LIASO43766 372 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 ATP9AO75110 1047 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 DGAT1O75907 488 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 DCTN3O75935 186 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 ACO1P21399 889 aaKnown RBP13.93□□□□□ -0.18
CPNE6-204ENST00000557829 ALDH3A1P30838 453 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 MORF4L2Q15014 288 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 P3H1Q32P28 736 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 ZC3H12AQ5D1E8 599 aaKnown RBP13.93□□□□□ -0.18
CPNE6-204ENST00000557829 GPRC5AQ8NFJ5 357 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 FAXDC2Q96IV6 333 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 PI4K2AQ9BTU6 479 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 HEMGNQ9BXL5 484 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 LRMDAQ9H2I8 198 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 PARVAQ9NVD7 372 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 TBK1Q9UHD2 729 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 RPL26L1Q9UNX3 145 aaKnown RBP13.93□□□□□ -0.18
CPNE6-204ENST00000557829 L3MBTL1Q9Y468 752 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 STYXL1Q9Y6J8 313 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 MCM3APO60318 1980 aa13.93□□□□□ -0.18
CPNE6-204ENST00000557829 SIP14410 1827 aa13.92□□□□□ -0.18
CPNE6-204ENST00000557829 EXOC1LA0A1B0GW35 172 aa13.92□□□□□ -0.18
CPNE6-204ENST00000557829 FAM155AB1AL88 458 aaPredicted RBP13.92□□□□□ -0.18
CPNE6-204ENST00000557829 E7ENQ6 273 aa13.92□□□□□ -0.18
CPNE6-204ENST00000557829 HNRNPDLO14979 420 aaKnown RBP13.92□□□□□ -0.18
CPNE6-204ENST00000557829 ALOX15BO15296 676 aa13.92□□□□□ -0.18
CPNE6-204ENST00000557829 TJP3O95049 919 aa13.92□□□□□ -0.18
CPNE6-204ENST00000557829 STBD1O95210 358 aa13.92□□□□□ -0.18
CPNE6-204ENST00000557829 HLA-DRAP01903 254 aa13.92□□□□□ -0.18
CPNE6-204ENST00000557829 SLC10A3P09131 477 aa13.92□□□□□ -0.18
CPNE6-204ENST00000557829 GCAP28676 217 aa13.92□□□□□ -0.18
CPNE6-204ENST00000557829 NFX1Q12986 1120 aaKnown RBP13.92□□□□□ -0.18
CPNE6-204ENST00000557829 TMED2Q15363 201 aa13.92□□□□□ -0.18
CPNE6-204ENST00000557829 PDK4Q16654 411 aa13.92□□□□□ -0.18
CPNE6-204ENST00000557829 GSTA5Q7RTV2 222 aa13.92□□□□□ -0.18
CPNE6-204ENST00000557829 SH3TC2Q8TF17 1288 aa13.92□□□□□ -0.18
CPNE6-204ENST00000557829 GTF3C2Q8WUA4 911 aaPredicted RBP13.92□□□□□ -0.18
CPNE6-204ENST00000557829 ATP6V0A1Q93050 837 aa13.92□□□□□ -0.18
CPNE6-204ENST00000557829 FGD4Q96M96 766 aa13.92□□□□□ -0.18
CPNE6-204ENST00000557829 PWWP2AQ96N64 755 aa13.92□□□□□ -0.18
CPNE6-204ENST00000557829 MMP19Q99542 508 aa13.92□□□□□ -0.18
CPNE6-204ENST00000557829 SH2D3AQ9BRG2 576 aa13.92□□□□□ -0.18
CPNE6-204ENST00000557829 KIFC3Q9BVG8 833 aa13.92□□□□□ -0.18
CPNE6-204ENST00000557829 ARHGAP28Q9P2N2 729 aa13.92□□□□□ -0.18
CPNE6-204ENST00000557829 TBXAS1P24557 533 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms