RNA–Protein interactions for RNA: ENST00000557768.1

HNRNPC-233, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-233ENST00000557768 SRGAP2CP0DJJ0 459 aa6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 ZSCAN22P10073 491 aaPredicted RBP6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 ATP2A2P16615 1042 aaKnown RBP6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 ZSCAN20P17040 1043 aaPredicted RBP6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 GNAT2P19087 354 aa6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 CCND1P24385 295 aa6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 SLC16A2P36021 539 aa6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 SLC1A4P43007 532 aa6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 CDR1P51861 262 aa6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 NCKAP1LP55160 1127 aa6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 CORO7P57737 925 aa6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 GPR85P60893 370 aa6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 PPARAQ07869 468 aa6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 HLTFQ14527 1009 aaKnown RBP eCLIP6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 SSPNQ14714 243 aa6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 NR1I3Q14994 352 aa6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 PTPN21Q16825 1174 aa6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 PLEKHN1Q494U1 663 aaPredicted RBP6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 ATP13A4Q4VNC1 1196 aa6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 FAM102BQ5T8I3 360 aa6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 C20orf194Q5TEA3 1177 aa6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 KRT40Q6A162 431 aa6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 ZC3H14Q6PJT7 736 aaKnown RBP6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 PAQR3Q6TCH7 311 aa6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 FKBP9P1Q75LS8 142 aa6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 LZTR1Q8N653 840 aa6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 USP33Q8TEY7 942 aa6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 JPH3Q8WXH2 748 aaPredicted RBP6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 ZFYVE21Q9BQ24 234 aa6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 ORAI3Q9BRQ5 295 aa6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 WDR11Q9BZH6 1224 aa6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 NACAP1Q9BZK3 213 aa6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 ALDH8A1Q9H2A2 487 aaPredicted RBP6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 RXFP1Q9HBX9 757 aa6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 ARNT2Q9HBZ2 717 aa6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 VTA1Q9NP79 307 aa6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 IL17RBQ9NRM6 502 aa6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 GULP1Q9UBP9 304 aa6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 IP6K2Q9UHH9 426 aa6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 TMEFF2Q9UIK5 374 aaPredicted RBP6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 CCPG1Q9ULG6 757 aa6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 STX8Q9UNK0 236 aa6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 KCTD3Q9Y597 815 aa6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 HCFC2Q9Y5Z7 792 aa6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 IRAK3Q9Y616 596 aa6.3□□□□□ -1.4
HNRNPC-233ENST00000557768 TRBV23OR9-2A0A075B6M9 112 aa6.29□□□□□ -1.4
HNRNPC-233ENST00000557768 ZC3H12DA2A288 527 aaKnown RBP6.29□□□□□ -1.4
HNRNPC-233ENST00000557768 C7orf72A4D263 438 aa6.29□□□□□ -1.4
HNRNPC-233ENST00000557768 EPOPA6NHQ4 379 aa6.29□□□□□ -1.4
HNRNPC-233ENST00000557768 N4BP3O15049 544 aa6.29□□□□□ -1.4
HNRNPC-233ENST00000557768 CYBBP04839 570 aa6.29□□□□□ -1.4
HNRNPC-233ENST00000557768 SLC3A2P08195 630 aaKnown RBP6.29□□□□□ -1.4
HNRNPC-233ENST00000557768 PLA2G5P39877 138 aa6.29□□□□□ -1.4
HNRNPC-233ENST00000557768 MAPKAPK2P49137 400 aa6.29□□□□□ -1.4
HNRNPC-233ENST00000557768 ALDH5A1P51649 535 aaPredicted RBP6.29□□□□□ -1.4
HNRNPC-233ENST00000557768 ZNF200P98182 395 aaPredicted RBP6.29□□□□□ -1.4
HNRNPC-233ENST00000557768 PURAQ00577 322 aaKnown RBP6.29□□□□□ -1.4
HNRNPC-233ENST00000557768 BAATQ14032 418 aaPredicted RBP6.29□□□□□ -1.4
HNRNPC-233ENST00000557768 INF2Q27J81 1249 aa6.29□□□□□ -1.4
HNRNPC-233ENST00000557768 CCDC96Q2M329 555 aa6.29□□□□□ -1.4
HNRNPC-233ENST00000557768 DUSP28Q4G0W2 176 aa6.29□□□□□ -1.4
HNRNPC-233ENST00000557768 FAM47CQ5HY64 1035 aa6.29□□□□□ -1.4
HNRNPC-233ENST00000557768 RSPO2Q6UXX9 243 aaPredicted RBP6.29□□□□□ -1.4
HNRNPC-233ENST00000557768 LCNL1Q6ZST4 164 aa6.29□□□□□ -1.4
HNRNPC-233ENST00000557768 C11orf74Q86VG3 221 aa6.29□□□□□ -1.4
HNRNPC-233ENST00000557768 CCDC103Q8IW40 242 aa6.29□□□□□ -1.4
HNRNPC-233ENST00000557768 TCEAL8Q8IYN2 117 aa6.29□□□□□ -1.4
HNRNPC-233ENST00000557768 OR6J1Q8NGC5 347 aa6.29□□□□□ -1.4
HNRNPC-233ENST00000557768 MZB1Q8WU39 189 aa6.29□□□□□ -1.4
HNRNPC-233ENST00000557768 ARNTL2Q8WYA1 636 aa6.29□□□□□ -1.4
HNRNPC-233ENST00000557768 FAM122AQ96E09 287 aa6.29□□□□□ -1.4
HNRNPC-233ENST00000557768 SIGLEC10Q96LC7 697 aa6.29□□□□□ -1.4
HNRNPC-233ENST00000557768 FSD1Q9BTV5 496 aa6.29□□□□□ -1.4
HNRNPC-233ENST00000557768 NAPBQ9H115 298 aa6.29□□□□□ -1.4
HNRNPC-233ENST00000557768 LUC7LQ9NQ29 371 aaKnown RBP6.29□□□□□ -1.4
HNRNPC-233ENST00000557768 THG1LQ9NWX6 298 aaKnown RBP6.29□□□□□ -1.4
HNRNPC-233ENST00000557768 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.29□□□□□ -1.4
HNRNPC-233ENST00000557768 COQ6Q9Y2Z9 468 aa6.29□□□□□ -1.4
HNRNPC-233ENST00000557768 Q9Y3F1 56 aa6.29□□□□□ -1.4
HNRNPC-233ENST00000557768 MTCH2Q9Y6C9 303 aa6.29□□□□□ -1.4
HNRNPC-233ENST00000557768 KAT6AQ92794 2004 aa6.28□□□□□ -1.4
HNRNPC-233ENST00000557768 FRMPD2Q68DX3 1309 aaPredicted RBP6.28□□□□□ -1.4
HNRNPC-233ENST00000557768 PTPDC1A2A3K4 754 aa6.28□□□□□ -1.4
HNRNPC-233ENST00000557768 TSPY2A6NKD2 308 aa6.28□□□□□ -1.4
HNRNPC-233ENST00000557768 ERC2O15083 957 aa6.28□□□□□ -1.4
HNRNPC-233ENST00000557768 FOXP2O15409 715 aa6.28□□□□□ -1.4
HNRNPC-233ENST00000557768 NPHS1O60500 1241 aa6.28□□□□□ -1.4
HNRNPC-233ENST00000557768 RANBP6O60518 1105 aaKnown RBP6.28□□□□□ -1.4
HNRNPC-233ENST00000557768 PLA2G6O60733 806 aa6.28□□□□□ -1.4
HNRNPC-233ENST00000557768 ICAM1P05362 532 aa6.28□□□□□ -1.4
HNRNPC-233ENST00000557768 PFKMP08237 780 aa6.28□□□□□ -1.4
HNRNPC-233ENST00000557768 SUPT20HL2P0C7V6 817 aa6.28□□□□□ -1.4
HNRNPC-233ENST00000557768 MYBL2P10244 700 aa6.28□□□□□ -1.4
HNRNPC-233ENST00000557768 PI3P19957 117 aa6.28□□□□□ -1.4
HNRNPC-233ENST00000557768 CALML3P27482 149 aa6.28□□□□□ -1.4
HNRNPC-233ENST00000557768 LTBRP36941 435 aa6.28□□□□□ -1.4
HNRNPC-233ENST00000557768 CPT1AP50416 773 aa6.28□□□□□ -1.4
HNRNPC-233ENST00000557768 DSG1Q02413 1049 aa6.28□□□□□ -1.4
HNRNPC-233ENST00000557768 TAP1Q03518 808 aa6.28□□□□□ -1.4
HNRNPC-233ENST00000557768 PAK1Q13153 545 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms