RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 FCHO2Q0JRZ9 810 aa15.76■□□□□ 0.11
SHMT2-235ENST00000557740 LRRC52Q8N7C0 313 aa15.76■□□□□ 0.11
SHMT2-235ENST00000557740 C1orf127Q8N9H9 656 aa15.76■□□□□ 0.11
SHMT2-235ENST00000557740 GIPC2Q8TF65 315 aa15.76■□□□□ 0.11
SHMT2-235ENST00000557740 RSPRY1Q96DX4 576 aa15.76■□□□□ 0.11
SHMT2-235ENST00000557740 MSANTD3Q96H12 275 aa15.76■□□□□ 0.11
SHMT2-235ENST00000557740 IER2Q9BTL4 223 aa15.76■□□□□ 0.11
SHMT2-235ENST00000557740 TNMDQ9H2S6 317 aa15.76■□□□□ 0.11
SHMT2-235ENST00000557740 CHRDQ9H2X0 955 aa15.76■□□□□ 0.11
SHMT2-235ENST00000557740 PCIF1Q9H4Z3 704 aa15.76■□□□□ 0.11
SHMT2-235ENST00000557740 R3HCC1Q9Y3T6 440 aaKnown RBP15.76■□□□□ 0.11
SHMT2-235ENST00000557740 PCDHB5Q9Y5E4 795 aa15.76■□□□□ 0.11
SHMT2-235ENST00000557740 GPR179Q6PRD1 2367 aa15.76■□□□□ 0.11
SHMT2-235ENST00000557740 ARNTLO00327 626 aa15.75■□□□□ 0.11
SHMT2-235ENST00000557740 KIAA0391O15091 583 aaKnown RBP15.75■□□□□ 0.11
SHMT2-235ENST00000557740 HSP90AA1P07900 732 aaKnown RBP15.75■□□□□ 0.11
SHMT2-235ENST00000557740 KRT19P08727 400 aa15.75■□□□□ 0.11
SHMT2-235ENST00000557740 HAPLN1P10915 354 aaPredicted RBP15.75■□□□□ 0.11
SHMT2-235ENST00000557740 ASIC1P78348 528 aa15.75■□□□□ 0.11
SHMT2-235ENST00000557740 MTAPQ13126 283 aa15.75■□□□□ 0.11
SHMT2-235ENST00000557740 PPP2R5DQ14738 602 aa15.75■□□□□ 0.11
SHMT2-235ENST00000557740 C1orf228Q6PIY5 440 aa15.75■□□□□ 0.11
SHMT2-235ENST00000557740 LRRTM3Q86VH5 581 aa15.75■□□□□ 0.11
SHMT2-235ENST00000557740 GPIHBP1Q8IV16 184 aa15.75■□□□□ 0.11
SHMT2-235ENST00000557740 GPD1LQ8N335 351 aa15.75■□□□□ 0.11
SHMT2-235ENST00000557740 PDCL2Q8N4E4 241 aa15.75■□□□□ 0.11
SHMT2-235ENST00000557740 CSGALNACT2Q8N6G5 542 aa15.75■□□□□ 0.11
SHMT2-235ENST00000557740 RUBCNQ92622 972 aa15.75■□□□□ 0.11
SHMT2-235ENST00000557740 BORCS6Q96GS4 357 aa15.75■□□□□ 0.11
SHMT2-235ENST00000557740 MTMR12Q9C0I1 747 aa15.75■□□□□ 0.11
SHMT2-235ENST00000557740 CUEDC2Q9H467 287 aa15.75■□□□□ 0.11
SHMT2-235ENST00000557740 PDE11AQ9HCR9 933 aa15.75■□□□□ 0.11
SHMT2-235ENST00000557740 PRMT8Q9NR22 394 aaPredicted RBP15.75■□□□□ 0.11
SHMT2-235ENST00000557740 ZSCAN32Q9NX65 697 aa15.75■□□□□ 0.11
SHMT2-235ENST00000557740 OBP2AQ9NY56 170 aa15.75■□□□□ 0.11
SHMT2-235ENST00000557740 L1RE1Q9UN81 338 aa15.75■□□□□ 0.11
SHMT2-235ENST00000557740 OTOGLQ3ZCN5 2332 aa15.74■□□□□ 0.11
SHMT2-235ENST00000557740 SCN1AP35498 2009 aa15.74■□□□□ 0.11
SHMT2-235ENST00000557740 PPP6R2O75170 966 aa15.74■□□□□ 0.11
SHMT2-235ENST00000557740 PRAMEF12O95522 483 aa15.74■□□□□ 0.11
SHMT2-235ENST00000557740 YEATS4O95619 227 aa15.74■□□□□ 0.11
SHMT2-235ENST00000557740 CCNE1P24864 410 aa15.74■□□□□ 0.11
SHMT2-235ENST00000557740 RBP5P82980 135 aa15.74■□□□□ 0.11
SHMT2-235ENST00000557740 AMPD3Q01432 767 aa15.74■□□□□ 0.11
SHMT2-235ENST00000557740 MYL7Q01449 175 aa15.74■□□□□ 0.11
SHMT2-235ENST00000557740 FZD5Q13467 585 aa15.74■□□□□ 0.11
SHMT2-235ENST00000557740 NFE2Q16621 373 aaPredicted RBP15.74■□□□□ 0.11
SHMT2-235ENST00000557740 ARHGAP29Q52LW3 1261 aa15.74■□□□□ 0.11
SHMT2-235ENST00000557740 FOXD4L5Q5VV16 416 aaPredicted RBP15.74■□□□□ 0.11
SHMT2-235ENST00000557740 HSCBQ8IWL3 235 aa15.74■□□□□ 0.11
SHMT2-235ENST00000557740 ZNF687Q8N1G0 1237 aa15.74■□□□□ 0.11
SHMT2-235ENST00000557740 TMEM86AQ8N2M4 240 aa15.74■□□□□ 0.11
SHMT2-235ENST00000557740 FOXD4L4Q8WXT5 416 aaPredicted RBP15.74■□□□□ 0.11
SHMT2-235ENST00000557740 DHX58Q96C10 678 aa15.74■□□□□ 0.11
SHMT2-235ENST00000557740 ANKRD36BP1Q96IX9 119 aa15.74■□□□□ 0.11
SHMT2-235ENST00000557740 FAM84AQ96KN4 292 aa15.74■□□□□ 0.11
SHMT2-235ENST00000557740 PI4K2AQ9BTU6 479 aa15.74■□□□□ 0.11
SHMT2-235ENST00000557740 MKNK1Q9BUB5 465 aa15.74■□□□□ 0.11
SHMT2-235ENST00000557740 TASP1Q9H6P5 420 aa15.74■□□□□ 0.11
SHMT2-235ENST00000557740 C8orf33Q9H7E9 229 aaPredicted RBP15.74■□□□□ 0.11
SHMT2-235ENST00000557740 TFIP11Q9UBB9 837 aaKnown RBP15.74■□□□□ 0.11
SHMT2-235ENST00000557740 ZMYM5Q9UJ78 669 aa15.74■□□□□ 0.11
SHMT2-235ENST00000557740 ANK1P16157 1881 aa15.74■□□□□ 0.11
SHMT2-235ENST00000557740 SLC38A8A6NNN8 435 aa15.73■□□□□ 0.11
SHMT2-235ENST00000557740 CUTAO60888 179 aa15.73■□□□□ 0.11
SHMT2-235ENST00000557740 PRPF40AO75400 957 aaKnown RBP15.73■□□□□ 0.11
SHMT2-235ENST00000557740 ID4P47928 161 aa15.73■□□□□ 0.11
SHMT2-235ENST00000557740 MLLT6P55198 1093 aaPredicted RBP15.73■□□□□ 0.11
SHMT2-235ENST00000557740 PLCB2Q00722 1185 aa15.73■□□□□ 0.11
SHMT2-235ENST00000557740 MYO1EQ12965 1108 aa15.73■□□□□ 0.11
SHMT2-235ENST00000557740 LRRC32Q14392 662 aa15.73■□□□□ 0.11
SHMT2-235ENST00000557740 E2F4Q16254 413 aa15.73■□□□□ 0.11
SHMT2-235ENST00000557740 INTS6LQ5JSJ4 861 aaKnown RBP15.73■□□□□ 0.11
SHMT2-235ENST00000557740 LMBRD2Q68DH5 695 aaPredicted RBP15.73■□□□□ 0.11
SHMT2-235ENST00000557740 TSSK4Q6SA08 328 aa15.73■□□□□ 0.11
SHMT2-235ENST00000557740 KIAA2013Q8IYS2 634 aa15.73■□□□□ 0.11
SHMT2-235ENST00000557740 ADGRF2Q8IZF7 708 aa15.73■□□□□ 0.11
SHMT2-235ENST00000557740 IQUBQ8NA54 791 aa15.73■□□□□ 0.11
SHMT2-235ENST00000557740 LEO1Q8WVC0 666 aaPredicted RBP15.73■□□□□ 0.11
SHMT2-235ENST00000557740 ACBD6Q9BR61 282 aa15.73■□□□□ 0.11
SHMT2-235ENST00000557740 FAM126AQ9BYI3 521 aaPredicted RBP15.73■□□□□ 0.11
SHMT2-235ENST00000557740 TRIM9Q9C026 710 aa15.73■□□□□ 0.11
SHMT2-235ENST00000557740 LMAN1LQ9HAT1 526 aa15.73■□□□□ 0.11
SHMT2-235ENST00000557740 IL21Q9HBE4 155 aa15.73■□□□□ 0.11
SHMT2-235ENST00000557740 TMLHEQ9NVH6 421 aa15.73■□□□□ 0.11
SHMT2-235ENST00000557740 KBTBD4Q9NVX7 518 aa15.73■□□□□ 0.11
SHMT2-235ENST00000557740 THG1LQ9NWX6 298 aaKnown RBP15.73■□□□□ 0.11
SHMT2-235ENST00000557740 DDX43Q9NXZ2 648 aaKnown RBP15.73■□□□□ 0.11
SHMT2-235ENST00000557740 SNX9Q9Y5X1 595 aa15.73■□□□□ 0.11
SHMT2-235ENST00000557740 COL4A2P08572 1712 aa15.72■□□□□ 0.11
SHMT2-235ENST00000557740 ZNF233A6NK53 670 aa15.72■□□□□ 0.11
SHMT2-235ENST00000557740 EIF3DO15371 548 aaKnown RBP eCLIP15.72■□□□□ 0.11
SHMT2-235ENST00000557740 TNNC2P02585 160 aa15.72■□□□□ 0.11
SHMT2-235ENST00000557740 PCSK1P29120 753 aa15.72■□□□□ 0.11
SHMT2-235ENST00000557740 WEE1P30291 646 aa15.72■□□□□ 0.11
SHMT2-235ENST00000557740 AVPR1AP37288 418 aa15.72■□□□□ 0.11
SHMT2-235ENST00000557740 SOX9P48436 509 aa15.72■□□□□ 0.11
SHMT2-235ENST00000557740 CCR3P51677 355 aa15.72■□□□□ 0.11
SHMT2-235ENST00000557740 RPL10AP62906 217 aaKnown RBP15.72■□□□□ 0.11
SHMT2-235ENST00000557740 SURF1Q15526 300 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms