RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 MFSD6LQ8IWD5 586 aa17.97■□□□□ 0.47
NEK9-211ENST00000557673 YAF2Q8IY57 180 aa17.97■□□□□ 0.47
NEK9-211ENST00000557673 KIAA0895Q8NCT3 520 aa17.97■□□□□ 0.47
NEK9-211ENST00000557673 ZSCAN18Q8TBC5 510 aaPredicted RBP17.97■□□□□ 0.47
NEK9-211ENST00000557673 MSTO1Q9BUK6 570 aa17.97■□□□□ 0.47
NEK9-211ENST00000557673 IKZF4Q9H2S9 585 aa17.97■□□□□ 0.47
NEK9-211ENST00000557673 SLITRK6Q9H5Y7 841 aa17.97■□□□□ 0.47
NEK9-211ENST00000557673 HOOK1Q9UJC3 728 aaKnown RBP17.97■□□□□ 0.47
NEK9-211ENST00000557673 PCDHB8Q9UN66 801 aa17.97■□□□□ 0.47
NEK9-211ENST00000557673 A0A0B4J269 797 aa17.96■□□□□ 0.47
NEK9-211ENST00000557673 LRP3O75074 770 aa17.96■□□□□ 0.47
NEK9-211ENST00000557673 RHOBTB3O94955 611 aa17.96■□□□□ 0.47
NEK9-211ENST00000557673 CXCL12P48061 93 aa17.96■□□□□ 0.47
NEK9-211ENST00000557673 PPP2R3AQ06190 1150 aa17.96■□□□□ 0.47
NEK9-211ENST00000557673 LRRC32Q14392 662 aa17.96■□□□□ 0.47
NEK9-211ENST00000557673 KCNB1Q14721 858 aa17.96■□□□□ 0.47
NEK9-211ENST00000557673 STXBP4Q6ZWJ1 553 aa17.96■□□□□ 0.47
NEK9-211ENST00000557673 SPATA20Q8TB22 786 aa17.96■□□□□ 0.47
NEK9-211ENST00000557673 CSGALNACT1Q8TDX6 532 aa17.96■□□□□ 0.47
NEK9-211ENST00000557673 KIF12Q96FN5 646 aa17.96■□□□□ 0.47
NEK9-211ENST00000557673 ZSWIM3Q96MP5 696 aa17.96■□□□□ 0.47
NEK9-211ENST00000557673 ACCSQ96QU6 501 aa17.96■□□□□ 0.47
NEK9-211ENST00000557673 PLEKHA5Q9HAU0 1116 aa17.96■□□□□ 0.47
NEK9-211ENST00000557673 CEP72Q9P209 647 aa17.96■□□□□ 0.47
NEK9-211ENST00000557673 PCDHB13Q9Y5F0 798 aa17.96■□□□□ 0.47
NEK9-211ENST00000557673 LACTBL1A8MY62 500 aa17.95■□□□□ 0.46
NEK9-211ENST00000557673 PRPF6O94906 941 aaKnown RBP17.95■□□□□ 0.46
NEK9-211ENST00000557673 TDGF1P13385 188 aa17.95■□□□□ 0.46
NEK9-211ENST00000557673 VIPR2P41587 438 aa17.95■□□□□ 0.46
NEK9-211ENST00000557673 EPHB3P54753 998 aa17.95■□□□□ 0.46
NEK9-211ENST00000557673 YWHAHQ04917 246 aaPredicted RBP17.95■□□□□ 0.46
NEK9-211ENST00000557673 KYAT1Q16773 422 aa17.95■□□□□ 0.46
NEK9-211ENST00000557673 BMT2Q1RMZ1 405 aa17.95■□□□□ 0.46
NEK9-211ENST00000557673 USP37Q86T82 979 aa17.95■□□□□ 0.46
NEK9-211ENST00000557673 HS6ST3Q8IZP7 471 aa17.95■□□□□ 0.46
NEK9-211ENST00000557673 SCFD1Q8WVM8 642 aa17.95■□□□□ 0.46
NEK9-211ENST00000557673 CCDC47Q96A33 483 aaKnown RBP17.95■□□□□ 0.46
NEK9-211ENST00000557673 C8orf33Q9H7E9 229 aaPredicted RBP17.95■□□□□ 0.46
NEK9-211ENST00000557673 RPF1Q9H9Y2 349 aaKnown RBP17.95■□□□□ 0.46
NEK9-211ENST00000557673 SLC39A2Q9NP94 309 aa17.95■□□□□ 0.46
NEK9-211ENST00000557673 EXOC7Q9UPT5 735 aa17.95■□□□□ 0.46
NEK9-211ENST00000557673 TPRP12270 2363 aaKnown RBP17.94■□□□□ 0.46
NEK9-211ENST00000557673 HEPACAM2A8MVW5 462 aa17.94■□□□□ 0.46
NEK9-211ENST00000557673 CHADO15335 359 aa17.94■□□□□ 0.46
NEK9-211ENST00000557673 FOXD2O60548 495 aaPredicted RBP17.94■□□□□ 0.46
NEK9-211ENST00000557673 OAZ2O95190 189 aa17.94■□□□□ 0.46
NEK9-211ENST00000557673 RETP07949 1114 aa17.94■□□□□ 0.46
NEK9-211ENST00000557673 TGM1P22735 817 aa17.94■□□□□ 0.46
NEK9-211ENST00000557673 CCNE1P24864 410 aa17.94■□□□□ 0.46
NEK9-211ENST00000557673 CNR2P34972 360 aa17.94■□□□□ 0.46
NEK9-211ENST00000557673 GUCY2FP51841 1108 aa17.94■□□□□ 0.46
NEK9-211ENST00000557673 STK4Q13043 487 aa17.94■□□□□ 0.46
NEK9-211ENST00000557673 PSMD2Q13200 908 aa17.94■□□□□ 0.46
NEK9-211ENST00000557673 RNF19BQ6ZMZ0 732 aa17.94■□□□□ 0.46
NEK9-211ENST00000557673 SPEM1Q8N4L4 309 aa17.94■□□□□ 0.46
NEK9-211ENST00000557673 BEST2Q8NFU1 509 aa17.94■□□□□ 0.46
NEK9-211ENST00000557673 GPT2Q8TD30 523 aa17.94■□□□□ 0.46
NEK9-211ENST00000557673 ERCC4Q92889 916 aaPredicted RBP17.94■□□□□ 0.46
NEK9-211ENST00000557673 FAM212AQ96EL1 285 aa17.94■□□□□ 0.46
NEK9-211ENST00000557673 CPSF3Q9UKF6 684 aaKnown RBP17.94■□□□□ 0.46
NEK9-211ENST00000557673 UBQLN1Q9UMX0 589 aaKnown RBP17.94■□□□□ 0.46
NEK9-211ENST00000557673 OR6C75A6NL08 312 aa17.93■□□□□ 0.46
NEK9-211ENST00000557673 M0QZQ0 153 aa17.93■□□□□ 0.46
NEK9-211ENST00000557673 XPOTO43592 962 aaKnown RBP17.93■□□□□ 0.46
NEK9-211ENST00000557673 MOSPD3O75425 235 aa17.93■□□□□ 0.46
NEK9-211ENST00000557673 SMC2O95347 1197 aa17.93■□□□□ 0.46
NEK9-211ENST00000557673 FGF19O95750 216 aa17.93■□□□□ 0.46
NEK9-211ENST00000557673 CHRNB1P11230 501 aa17.93■□□□□ 0.46
NEK9-211ENST00000557673 HOXD13P35453 343 aa17.93■□□□□ 0.46
NEK9-211ENST00000557673 ALDH1A3P47895 512 aa17.93■□□□□ 0.46
NEK9-211ENST00000557673 ACOT2P49753 483 aa17.93■□□□□ 0.46
NEK9-211ENST00000557673 KPNA1P52294 538 aaPredicted RBP17.93■□□□□ 0.46
NEK9-211ENST00000557673 TEAD2Q15562 447 aa17.93■□□□□ 0.46
NEK9-211ENST00000557673 ZBTB6Q15916 424 aa17.93■□□□□ 0.46
NEK9-211ENST00000557673 PRR23BQ6ZRT6 265 aa17.93■□□□□ 0.46
NEK9-211ENST00000557673 ZNF507Q8TCN5 953 aa17.93■□□□□ 0.46
NEK9-211ENST00000557673 FAM200AQ8TCP9 573 aa17.93■□□□□ 0.46
NEK9-211ENST00000557673 NETO1Q8TDF5 533 aa17.93■□□□□ 0.46
NEK9-211ENST00000557673 SMARCE1Q969G3 411 aa17.93■□□□□ 0.46
NEK9-211ENST00000557673 CNTNAP3BQ96NU0 1288 aa17.93■□□□□ 0.46
NEK9-211ENST00000557673 GSDMAQ96QA5 445 aa17.93■□□□□ 0.46
NEK9-211ENST00000557673 TSPAN18Q96SJ8 248 aa17.93■□□□□ 0.46
NEK9-211ENST00000557673 CNTNAP3Q9BZ76 1288 aa17.93■□□□□ 0.46
NEK9-211ENST00000557673 CLSTN2Q9H4D0 955 aa17.93■□□□□ 0.46
NEK9-211ENST00000557673 TMEM206Q9H813 350 aa17.93■□□□□ 0.46
NEK9-211ENST00000557673 RMND1Q9NWS8 449 aa17.93■□□□□ 0.46
NEK9-211ENST00000557673 YIPF1Q9Y548 306 aa17.93■□□□□ 0.46
NEK9-211ENST00000557673 ASB3Q9Y575 518 aa17.93■□□□□ 0.46
NEK9-211ENST00000557673 PCDHA5Q9Y5H7 936 aa17.93■□□□□ 0.46
NEK9-211ENST00000557673 STYXL1Q9Y6J8 313 aa17.93■□□□□ 0.46
NEK9-211ENST00000557673 EPG5Q9HCE0 2579 aa17.92■□□□□ 0.46
NEK9-211ENST00000557673 CACNA1BQ00975 2339 aa17.92■□□□□ 0.46
NEK9-211ENST00000557673 ADRB2P07550 413 aa17.92■□□□□ 0.46
NEK9-211ENST00000557673 NFICP08651 508 aa17.92■□□□□ 0.46
NEK9-211ENST00000557673 GJA1P17302 382 aa17.92■□□□□ 0.46
NEK9-211ENST00000557673 CYP3A5P20815 502 aa17.92■□□□□ 0.46
NEK9-211ENST00000557673 LRPAP1P30533 357 aa17.92■□□□□ 0.46
NEK9-211ENST00000557673 FCHO2Q0JRZ9 810 aa17.92■□□□□ 0.46
NEK9-211ENST00000557673 SPEM2Q0P670 501 aa17.92■□□□□ 0.46
NEK9-211ENST00000557673 GPR17Q13304 367 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms