RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 KIAA1468Q9P260 1216 aa13.41□□□□□ -0.26
SLIRP-211ENST00000557623 HSFX1Q9UBD0 423 aa13.41□□□□□ -0.26
SLIRP-211ENST00000557623 L1RE1Q9UN81 338 aa13.41□□□□□ -0.26
SLIRP-211ENST00000557623 POLIQ9UNA4 740 aa13.41□□□□□ -0.26
SLIRP-211ENST00000557623 INSL5Q9Y5Q6 135 aa13.41□□□□□ -0.26
SLIRP-211ENST00000557623 DOCK8Q8NF50 2099 aa13.4□□□□□ -0.26
SLIRP-211ENST00000557623 BICDL2A1A5D9 508 aa13.4□□□□□ -0.26
SLIRP-211ENST00000557623 SEC24AO95486 1093 aa13.4□□□□□ -0.26
SLIRP-211ENST00000557623 OR4Q2P0C623 313 aa13.4□□□□□ -0.26
SLIRP-211ENST00000557623 ALADP13716 330 aa13.4□□□□□ -0.26
SLIRP-211ENST00000557623 CCNE1P24864 410 aa13.4□□□□□ -0.26
SLIRP-211ENST00000557623 TNNC1P63316 161 aa13.4□□□□□ -0.26
SLIRP-211ENST00000557623 TDRD10Q5VZ19 366 aaKnown RBP13.4□□□□□ -0.26
SLIRP-211ENST00000557623 ANKRD40Q6AI12 368 aa13.4□□□□□ -0.26
SLIRP-211ENST00000557623 FOXR2Q6PJQ5 311 aa13.4□□□□□ -0.26
SLIRP-211ENST00000557623 RNF135Q8IUD6 432 aa13.4□□□□□ -0.26
SLIRP-211ENST00000557623 ADGRF2Q8IZF7 708 aa13.4□□□□□ -0.26
SLIRP-211ENST00000557623 ZDHHC14Q8IZN3 488 aa13.4□□□□□ -0.26
SLIRP-211ENST00000557623 OR10T2Q8NGX3 314 aa13.4□□□□□ -0.26
SLIRP-211ENST00000557623 PGLYRP2Q96PD5 576 aa13.4□□□□□ -0.26
SLIRP-211ENST00000557623 MMS19Q96T76 1030 aa13.4□□□□□ -0.26
SLIRP-211ENST00000557623 EPAS1Q99814 870 aa13.4□□□□□ -0.26
SLIRP-211ENST00000557623 RTP3Q9BQQ7 232 aa13.4□□□□□ -0.26
SLIRP-211ENST00000557623 ACBD6Q9BR61 282 aa13.4□□□□□ -0.26
SLIRP-211ENST00000557623 KRTAP3-3Q9BYR6 98 aa13.4□□□□□ -0.26
SLIRP-211ENST00000557623 KRTAP3-2Q9BYR7 98 aa13.4□□□□□ -0.26
SLIRP-211ENST00000557623 VRTNQ9H8Y1 702 aa13.4□□□□□ -0.26
SLIRP-211ENST00000557623 PCDHGA10Q9Y5H3 936 aa13.4□□□□□ -0.26
SLIRP-211ENST00000557623 NOTCH4Q99466 2003 aa13.4□□□□□ -0.26
SLIRP-211ENST00000557623 MYO10Q9HD67 2058 aa13.4□□□□□ -0.27
SLIRP-211ENST00000557623 MTMR11A4FU01 709 aa13.39□□□□□ -0.27
SLIRP-211ENST00000557623 C2CD4DB7Z1M9 353 aa13.39□□□□□ -0.27
SLIRP-211ENST00000557623 BIN1O00499 593 aa13.39□□□□□ -0.27
SLIRP-211ENST00000557623 ARHGAP33O14559 1287 aa13.39□□□□□ -0.27
SLIRP-211ENST00000557623 GABRDO14764 452 aa13.39□□□□□ -0.27
SLIRP-211ENST00000557623 SLC16A3O15427 465 aaKnown RBP13.39□□□□□ -0.27
SLIRP-211ENST00000557623 STX10O60499 249 aa13.39□□□□□ -0.27
SLIRP-211ENST00000557623 CLSTN1O94985 981 aa13.39□□□□□ -0.27
SLIRP-211ENST00000557623 PTPN2P17706 415 aa13.39□□□□□ -0.27
SLIRP-211ENST00000557623 WARSP23381 471 aaKnown RBP13.39□□□□□ -0.27
SLIRP-211ENST00000557623 SP100P23497 879 aaPredicted RBP13.39□□□□□ -0.27
SLIRP-211ENST00000557623 FSHRP23945 695 aa13.39□□□□□ -0.27
SLIRP-211ENST00000557623 PCSK1P29120 753 aa13.39□□□□□ -0.27
SLIRP-211ENST00000557623 GTF2H1P32780 548 aa13.39□□□□□ -0.27
SLIRP-211ENST00000557623 ALDH1A3P47895 512 aa13.39□□□□□ -0.27
SLIRP-211ENST00000557623 TUFMP49411 452 aaKnown RBP13.39□□□□□ -0.27
SLIRP-211ENST00000557623 MYL6P60660 151 aa13.39□□□□□ -0.27
SLIRP-211ENST00000557623 DLG4P78352 724 aa13.39□□□□□ -0.27
SLIRP-211ENST00000557623 NCOA4Q13772 614 aa13.39□□□□□ -0.27
SLIRP-211ENST00000557623 CAMK4Q16566 473 aa13.39□□□□□ -0.27
SLIRP-211ENST00000557623 NFE2Q16621 373 aaPredicted RBP13.39□□□□□ -0.27
SLIRP-211ENST00000557623 SOWAHAQ2M3V2 549 aa13.39□□□□□ -0.27
SLIRP-211ENST00000557623 WDR72Q3MJ13 1102 aa13.39□□□□□ -0.27
SLIRP-211ENST00000557623 ZACNQ401N2 412 aa13.39□□□□□ -0.27
SLIRP-211ENST00000557623 SLC39A12Q504Y0 691 aa13.39□□□□□ -0.27
SLIRP-211ENST00000557623 SCARA3Q6AZY7 606 aa13.39□□□□□ -0.27
SLIRP-211ENST00000557623 IQCEQ6IPM2 695 aa13.39□□□□□ -0.27
SLIRP-211ENST00000557623 LIMS2Q7Z4I7 341 aa13.39□□□□□ -0.27
SLIRP-211ENST00000557623 GRASPQ7Z6J2 395 aaPredicted RBP13.39□□□□□ -0.27
SLIRP-211ENST00000557623 ZC3H3Q8IXZ2 948 aaKnown RBP13.39□□□□□ -0.27
SLIRP-211ENST00000557623 FEZF2Q8TBJ5 459 aa13.39□□□□□ -0.27
SLIRP-211ENST00000557623 SPPL2BQ8TCT7 592 aa13.39□□□□□ -0.27
SLIRP-211ENST00000557623 ZNF512Q96ME7 567 aaPredicted RBP13.39□□□□□ -0.27
SLIRP-211ENST00000557623 TMEM209Q96SK2 561 aa13.39□□□□□ -0.27
SLIRP-211ENST00000557623 CLSTN2Q9H4D0 955 aa13.39□□□□□ -0.27
SLIRP-211ENST00000557623 LMBRD1Q9NUN5 540 aa13.39□□□□□ -0.27
SLIRP-211ENST00000557623 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.39□□□□□ -0.27
SLIRP-211ENST00000557623 ZFP37Q9Y6Q3 630 aaPredicted RBP13.39□□□□□ -0.27
SLIRP-211ENST00000557623 TRIM49BA6NDI0 452 aa13.38□□□□□ -0.27
SLIRP-211ENST00000557623 PPP1R3GB7ZBB8 358 aa13.38□□□□□ -0.27
SLIRP-211ENST00000557623 PI4K2BG5E9Z4 385 aa13.38□□□□□ -0.27
SLIRP-211ENST00000557623 TACC1O75410 805 aa13.38□□□□□ -0.27
SLIRP-211ENST00000557623 P4HA1P13674 534 aa13.38□□□□□ -0.27
SLIRP-211ENST00000557623 GBP2P32456 591 aaPredicted RBP13.38□□□□□ -0.27
SLIRP-211ENST00000557623 PMS1P54277 932 aaKnown RBP13.38□□□□□ -0.27
SLIRP-211ENST00000557623 EPHB3P54753 998 aa13.38□□□□□ -0.27
SLIRP-211ENST00000557623 MCCD1P59942 119 aaPredicted RBP13.38□□□□□ -0.27
SLIRP-211ENST00000557623 TWF1Q12792 350 aa13.38□□□□□ -0.27
SLIRP-211ENST00000557623 DUSP4Q13115 394 aa13.38□□□□□ -0.27
SLIRP-211ENST00000557623 SGSM1Q2NKQ1 1148 aa13.38□□□□□ -0.27
SLIRP-211ENST00000557623 ZNF699Q32M78 642 aa13.38□□□□□ -0.27
SLIRP-211ENST00000557623 PABPC1LQ4VXU2 614 aaKnown RBP13.38□□□□□ -0.27
SLIRP-211ENST00000557623 ZNF667Q5HYK9 610 aa13.38□□□□□ -0.27
SLIRP-211ENST00000557623 INTS6LQ5JSJ4 861 aaKnown RBP13.38□□□□□ -0.27
SLIRP-211ENST00000557623 KLHL10Q6JEL2 608 aa13.38□□□□□ -0.27
SLIRP-211ENST00000557623 SV2AQ7L0J3 742 aa13.38□□□□□ -0.27
SLIRP-211ENST00000557623 ATAD1Q8NBU5 361 aa13.38□□□□□ -0.27
SLIRP-211ENST00000557623 LEMD2Q8NC56 503 aa13.38□□□□□ -0.27
SLIRP-211ENST00000557623 NELFBQ8WX92 580 aa13.38□□□□□ -0.27
SLIRP-211ENST00000557623 TAF4BQ92750 862 aa13.38□□□□□ -0.27
SLIRP-211ENST00000557623 CEP63Q96MT8 703 aa13.38□□□□□ -0.27
SLIRP-211ENST00000557623 IMPG2Q9BZV3 1241 aa13.38□□□□□ -0.27
SLIRP-211ENST00000557623 XYLT2Q9H1B5 865 aa13.38□□□□□ -0.27
SLIRP-211ENST00000557623 NUP62CLQ9H1M0 184 aa13.38□□□□□ -0.27
SLIRP-211ENST00000557623 AVENQ9NQS1 362 aaPredicted RBP13.38□□□□□ -0.27
SLIRP-211ENST00000557623 DNMT3BQ9UBC3 853 aaKnown RBP13.38□□□□□ -0.27
SLIRP-211ENST00000557623 YIPF1Q9Y548 306 aa13.38□□□□□ -0.27
SLIRP-211ENST00000557623 PCDHB5Q9Y5E4 795 aa13.38□□□□□ -0.27
SLIRP-211ENST00000557623 NCOR1O75376 2440 aa13.38□□□□□ -0.27
SLIRP-211ENST00000557623 PTPRDP23468 1912 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms