RNA–Protein interactions for RNA: ENST00000557554.5

ABCD4-227, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 523 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-227ENST00000557554 MGAQ8IWI9 3026 aa10.95□□□□□ -0.66
ABCD4-227ENST00000557554 A0A087WWV3 80 aa10.95□□□□□ -0.66
ABCD4-227ENST00000557554 M0QZQ0 153 aa10.95□□□□□ -0.66
ABCD4-227ENST00000557554 ARHGAP33O14559 1287 aa10.95□□□□□ -0.66
ABCD4-227ENST00000557554 SOAT2O75908 522 aa10.95□□□□□ -0.66
ABCD4-227ENST00000557554 CFIP05156 583 aa10.95□□□□□ -0.66
ABCD4-227ENST00000557554 XRCC6P12956 609 aaKnown RBP eCLIP10.95□□□□□ -0.66
ABCD4-227ENST00000557554 INF2Q27J81 1249 aa10.95□□□□□ -0.66
ABCD4-227ENST00000557554 DCAF4L1Q3SXM0 396 aa10.95□□□□□ -0.66
ABCD4-227ENST00000557554 TSGA10IPQ3SY00 556 aa10.95□□□□□ -0.66
ABCD4-227ENST00000557554 LYSMD4Q5XG99 296 aa10.95□□□□□ -0.66
ABCD4-227ENST00000557554 PCSK4Q6UW60 755 aa10.95□□□□□ -0.66
ABCD4-227ENST00000557554 MARCH9Q86YJ5 346 aa10.95□□□□□ -0.66
ABCD4-227ENST00000557554 BLIDQ8IZY5 108 aa10.95□□□□□ -0.66
ABCD4-227ENST00000557554 CEP120Q8N960 986 aa10.95□□□□□ -0.66
ABCD4-227ENST00000557554 BRF1Q92994 677 aa10.95□□□□□ -0.66
ABCD4-227ENST00000557554 C18orf25Q96B23 403 aaPredicted RBP10.95□□□□□ -0.66
ABCD4-227ENST00000557554 HNRNPABQ99729 332 aaKnown RBP10.95□□□□□ -0.66
ABCD4-227ENST00000557554 EIF2AK1Q9BQI3 630 aaKnown RBP10.95□□□□□ -0.66
ABCD4-227ENST00000557554 OXCT2Q9BYC2 517 aaPredicted RBP10.95□□□□□ -0.66
ABCD4-227ENST00000557554 HSFX1Q9UBD0 423 aa10.95□□□□□ -0.66
ABCD4-227ENST00000557554 MMP17Q9ULZ9 603 aa10.95□□□□□ -0.66
ABCD4-227ENST00000557554 PCDHB8Q9UN66 801 aa10.95□□□□□ -0.66
ABCD4-227ENST00000557554 NUB1Q9Y5A7 615 aa10.95□□□□□ -0.66
ABCD4-227ENST00000557554 ATMQ13315 3056 aa10.95□□□□□ -0.66
ABCD4-227ENST00000557554 PIEZO2Q9H5I5 2752 aa10.94□□□□□ -0.66
ABCD4-227ENST00000557554 ATXN2Q99700 1313 aaKnown RBP10.94□□□□□ -0.66
ABCD4-227ENST00000557554 MAP3K13O43283 966 aa10.94□□□□□ -0.66
ABCD4-227ENST00000557554 IFNAR1P17181 557 aa10.94□□□□□ -0.66
ABCD4-227ENST00000557554 ITPKBP27987 946 aa10.94□□□□□ -0.66
ABCD4-227ENST00000557554 GRM5P41594 1212 aa10.94□□□□□ -0.66
ABCD4-227ENST00000557554 ATXN3P54252 364 aaPredicted RBP10.94□□□□□ -0.66
ABCD4-227ENST00000557554 AKAP17AQ02040 695 aaKnown RBP10.94□□□□□ -0.66
ABCD4-227ENST00000557554 SRSF1Q07955 248 aaKnown RBP eCLIP10.94□□□□□ -0.66
ABCD4-227ENST00000557554 PSMD2Q13200 908 aa10.94□□□□□ -0.66
ABCD4-227ENST00000557554 PDGFRLQ15198 375 aa10.94□□□□□ -0.66
ABCD4-227ENST00000557554 C2orf27AQ580R0 203 aa10.94□□□□□ -0.66
ABCD4-227ENST00000557554 NCAPH2Q6IBW4 605 aa10.94□□□□□ -0.66
ABCD4-227ENST00000557554 Q6ZUG5 572 aa10.94□□□□□ -0.66
ABCD4-227ENST00000557554 MAEAQ7L5Y9 396 aa10.94□□□□□ -0.66
ABCD4-227ENST00000557554 SKAP1Q86WV1 359 aa10.94□□□□□ -0.66
ABCD4-227ENST00000557554 ZBTB8OSQ8IWT0 167 aa10.94□□□□□ -0.66
ABCD4-227ENST00000557554 PIGOQ8TEQ8 1089 aa10.94□□□□□ -0.66
ABCD4-227ENST00000557554 SLC26A6Q9BXS9 759 aa10.94□□□□□ -0.66
ABCD4-227ENST00000557554 PTPRHQ9HD43 1115 aa10.94□□□□□ -0.66
ABCD4-227ENST00000557554 TDP1Q9NUW8 608 aa10.94□□□□□ -0.66
ABCD4-227ENST00000557554 TOR4AQ9NXH8 423 aa10.94□□□□□ -0.66
ABCD4-227ENST00000557554 ZMYM5Q9UJ78 669 aa10.94□□□□□ -0.66
ABCD4-227ENST00000557554 APOBEC2Q9Y235 224 aaKnown RBP10.94□□□□□ -0.66
ABCD4-227ENST00000557554 COL6A6A6NMZ7 2263 aa10.94□□□□□ -0.66
ABCD4-227ENST00000557554 MTMR11A4FU01 709 aa10.93□□□□□ -0.66
ABCD4-227ENST00000557554 ARHGAP6O43182 974 aa10.93□□□□□ -0.66
ABCD4-227ENST00000557554 F11P03951 625 aa10.93□□□□□ -0.66
ABCD4-227ENST00000557554 CDC25CP30307 473 aa10.93□□□□□ -0.66
ABCD4-227ENST00000557554 YWHAHQ04917 246 aaPredicted RBP10.93□□□□□ -0.66
ABCD4-227ENST00000557554 ATF7IP2Q5U623 682 aa10.93□□□□□ -0.66
ABCD4-227ENST00000557554 ITIH5Q86UX2 942 aa10.93□□□□□ -0.66
ABCD4-227ENST00000557554 NAXDQ8IW45 347 aa10.93□□□□□ -0.66
ABCD4-227ENST00000557554 CCDC33Q8N5R6 958 aa10.93□□□□□ -0.66
ABCD4-227ENST00000557554 CCDC26Q8TAB7 109 aa10.93□□□□□ -0.66
ABCD4-227ENST00000557554 EXOC4Q96A65 974 aa10.93□□□□□ -0.66
ABCD4-227ENST00000557554 LPIN3Q9BQK8 851 aa10.93□□□□□ -0.66
ABCD4-227ENST00000557554 C2orf40Q9H1Z8 148 aa10.93□□□□□ -0.66
ABCD4-227ENST00000557554 NCOA5Q9HCD5 579 aaKnown RBP10.93□□□□□ -0.66
ABCD4-227ENST00000557554 CNTN3Q9P232 1028 aa10.93□□□□□ -0.66
ABCD4-227ENST00000557554 TNFSF13BQ9Y275 285 aa10.93□□□□□ -0.66
ABCD4-227ENST00000557554 PCDHB9Q9Y5E1 797 aa10.93□□□□□ -0.66
ABCD4-227ENST00000557554 TIMM13Q9Y5L4 95 aaPredicted RBP10.93□□□□□ -0.66
ABCD4-227ENST00000557554 USP9XQ93008 2570 aaPredicted RBP10.93□□□□□ -0.66
ABCD4-227ENST00000557554 MYO18AQ92614 2054 aaKnown RBP10.93□□□□□ -0.66
ABCD4-227ENST00000557554 OBSL1O75147 1896 aa10.92□□□□□ -0.66
ABCD4-227ENST00000557554 OR6C75A6NL08 312 aa10.92□□□□□ -0.66
ABCD4-227ENST00000557554 MARCH6O60337 910 aa10.92□□□□□ -0.66
ABCD4-227ENST00000557554 LARGE1O95461 756 aa10.92□□□□□ -0.66
ABCD4-227ENST00000557554 HMGB1P09429 215 aaKnown RBP10.92□□□□□ -0.66
ABCD4-227ENST00000557554 ATF6P18850 670 aa10.92□□□□□ -0.66
ABCD4-227ENST00000557554 MARCKSP29966 332 aaPredicted RBP10.92□□□□□ -0.66
ABCD4-227ENST00000557554 MCM4P33991 863 aa10.92□□□□□ -0.66
ABCD4-227ENST00000557554 OPRD1P41143 372 aa10.92□□□□□ -0.66
ABCD4-227ENST00000557554 ABCG1P45844 678 aa10.92□□□□□ -0.66
ABCD4-227ENST00000557554 AARSP49588 968 aaKnown RBP eCLIP10.92□□□□□ -0.66
ABCD4-227ENST00000557554 CCT2P78371 535 aaKnown RBP10.92□□□□□ -0.66
ABCD4-227ENST00000557554 KRT32Q14532 448 aa10.92□□□□□ -0.66
ABCD4-227ENST00000557554 GAB4Q2WGN9 574 aa10.92□□□□□ -0.66
ABCD4-227ENST00000557554 TMEM130Q8N3G9 435 aa10.92□□□□□ -0.66
ABCD4-227ENST00000557554 MAB21L3Q8N8X9 362 aa10.92□□□□□ -0.66
ABCD4-227ENST00000557554 PIP4K2CQ8TBX8 421 aa10.92□□□□□ -0.66
ABCD4-227ENST00000557554 OSCP1Q8WVF1 389 aa10.92□□□□□ -0.66
ABCD4-227ENST00000557554 KIF9Q9HAQ2 790 aa10.92□□□□□ -0.66
ABCD4-227ENST00000557554 TOPORSQ9NS56 1045 aaPredicted RBP10.92□□□□□ -0.66
ABCD4-227ENST00000557554 PCOLCE2Q9UKZ9 415 aa10.92□□□□□ -0.66
ABCD4-227ENST00000557554 CITO14578 2027 aa10.92□□□□□ -0.66
ABCD4-227ENST00000557554 A0A0A0MRY4 1105 aa10.91□□□□□ -0.66
ABCD4-227ENST00000557554 ABLIM1O14639 778 aa10.91□□□□□ -0.66
ABCD4-227ENST00000557554 USO1O60763 962 aaKnown RBP10.91□□□□□ -0.66
ABCD4-227ENST00000557554 SPATA31C1P0DKV0 1188 aa10.91□□□□□ -0.66
ABCD4-227ENST00000557554 GCFC2P16383 781 aaKnown RBP10.91□□□□□ -0.66
ABCD4-227ENST00000557554 HMGA1P17096 107 aaKnown RBP10.91□□□□□ -0.66
ABCD4-227ENST00000557554 NMT1P30419 496 aaKnown RBP10.91□□□□□ -0.66
ABCD4-227ENST00000557554 AVPR1AP37288 418 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms