RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 ZSWIM2Q8NEG5 633 aa8.95□□□□□ -0.98
PSEN1-223ENST00000557511 SLC7A14Q8TBB6 771 aa8.95□□□□□ -0.98
PSEN1-223ENST00000557511 SPATA18Q8TC71 538 aa8.95□□□□□ -0.98
PSEN1-223ENST00000557511 SYAP1Q96A49 352 aaPredicted RBP8.95□□□□□ -0.98
PSEN1-223ENST00000557511 DHTKD1Q96HY7 919 aaPredicted RBP8.95□□□□□ -0.98
PSEN1-223ENST00000557511 MFSD14AQ96MC6 490 aa8.95□□□□□ -0.98
PSEN1-223ENST00000557511 MMS19Q96T76 1030 aa8.95□□□□□ -0.98
PSEN1-223ENST00000557511 S1PR5Q9H228 398 aa8.95□□□□□ -0.98
PSEN1-223ENST00000557511 CYP4F11Q9HBI6 524 aa8.95□□□□□ -0.98
PSEN1-223ENST00000557511 AFF4Q9UHB7 1163 aaKnown RBP8.95□□□□□ -0.98
PSEN1-223ENST00000557511 SNX9Q9Y5X1 595 aa8.95□□□□□ -0.98
PSEN1-223ENST00000557511 CDH23Q9H251 3354 aa8.95□□□□□ -0.98
PSEN1-223ENST00000557511 CITO14578 2027 aa8.94□□□□□ -0.98
PSEN1-223ENST00000557511 TRANK1O15050 2925 aa8.94□□□□□ -0.98
PSEN1-223ENST00000557511 PPEF2O14830 753 aa8.94□□□□□ -0.98
PSEN1-223ENST00000557511 CYP11A1P05108 521 aa8.94□□□□□ -0.98
PSEN1-223ENST00000557511 WEE2P0C1S8 567 aa8.94□□□□□ -0.98
PSEN1-223ENST00000557511 ALADP13716 330 aa8.94□□□□□ -0.98
PSEN1-223ENST00000557511 ATF2P15336 505 aa8.94□□□□□ -0.98
PSEN1-223ENST00000557511 HOXA9P31269 272 aa8.94□□□□□ -0.98
PSEN1-223ENST00000557511 GBP2P32456 591 aaPredicted RBP8.94□□□□□ -0.98
PSEN1-223ENST00000557511 PRCPP42785 496 aa8.94□□□□□ -0.98
PSEN1-223ENST00000557511 ALDH1A3P47895 512 aa8.94□□□□□ -0.98
PSEN1-223ENST00000557511 VAMP7P51809 220 aa8.94□□□□□ -0.98
PSEN1-223ENST00000557511 ZP2Q05996 745 aa8.94□□□□□ -0.98
PSEN1-223ENST00000557511 ADCY1Q08828 1119 aa8.94□□□□□ -0.98
PSEN1-223ENST00000557511 MRPL58Q14197 206 aaKnown RBP8.94□□□□□ -0.98
PSEN1-223ENST00000557511 CAMK4Q16566 473 aa8.94□□□□□ -0.98
PSEN1-223ENST00000557511 COBLL1Q53SF7 1204 aa8.94□□□□□ -0.98
PSEN1-223ENST00000557511 ISM2Q6H9L7 571 aa8.94□□□□□ -0.98
PSEN1-223ENST00000557511 KLHL10Q6JEL2 608 aa8.94□□□□□ -0.98
PSEN1-223ENST00000557511 SMYD4Q8IYR2 804 aaPredicted RBP8.94□□□□□ -0.98
PSEN1-223ENST00000557511 TOP6BLQ8N6T0 577 aa8.94□□□□□ -0.98
PSEN1-223ENST00000557511 OR5B17Q8NGF7 314 aa8.94□□□□□ -0.98
PSEN1-223ENST00000557511 C2orf15Q8WU43 125 aaKnown RBP8.94□□□□□ -0.98
PSEN1-223ENST00000557511 TMEM174Q8WUU8 243 aa8.94□□□□□ -0.98
PSEN1-223ENST00000557511 SUSD6Q92537 303 aa8.94□□□□□ -0.98
PSEN1-223ENST00000557511 ERCC4Q92889 916 aaPredicted RBP8.94□□□□□ -0.98
PSEN1-223ENST00000557511 ZNF512Q96ME7 567 aaPredicted RBP8.94□□□□□ -0.98
PSEN1-223ENST00000557511 MKNK1Q9BUB5 465 aa8.94□□□□□ -0.98
PSEN1-223ENST00000557511 RHOBTB2Q9BYZ6 727 aa8.94□□□□□ -0.98
PSEN1-223ENST00000557511 SNX25Q9H3E2 840 aa8.94□□□□□ -0.98
PSEN1-223ENST00000557511 DMAC2Q9NW81 257 aa8.94□□□□□ -0.98
PSEN1-223ENST00000557511 DACH1Q9UI36 760 aa8.94□□□□□ -0.98
PSEN1-223ENST00000557511 MAN1B1Q9UKM7 699 aa8.94□□□□□ -0.98
PSEN1-223ENST00000557511 WDR27A2RRH5 827 aa8.93□□□□□ -0.98
PSEN1-223ENST00000557511 BIN1O00499 593 aa8.93□□□□□ -0.98
PSEN1-223ENST00000557511 ZNF197O14709 1029 aa8.93□□□□□ -0.98
PSEN1-223ENST00000557511 IKBKBO14920 756 aa8.93□□□□□ -0.98
PSEN1-223ENST00000557511 SLC16A3O15427 465 aaKnown RBP8.93□□□□□ -0.98
PSEN1-223ENST00000557511 CCL16O15467 120 aa8.93□□□□□ -0.98
PSEN1-223ENST00000557511 RFPL2O75678 378 aa8.93□□□□□ -0.98
PSEN1-223ENST00000557511 ABLIM3O94929 683 aa8.93□□□□□ -0.98
PSEN1-223ENST00000557511 IGFBP6P24592 240 aaPredicted RBP8.93□□□□□ -0.98
PSEN1-223ENST00000557511 CCNE1P24864 410 aa8.93□□□□□ -0.98
PSEN1-223ENST00000557511 PIK3CAP42336 1068 aa8.93□□□□□ -0.98
PSEN1-223ENST00000557511 TUFMP49411 452 aaKnown RBP8.93□□□□□ -0.98
PSEN1-223ENST00000557511 EPHB3P54753 998 aa8.93□□□□□ -0.98
PSEN1-223ENST00000557511 ENPEPQ07075 957 aa8.93□□□□□ -0.98
PSEN1-223ENST00000557511 CETN1Q12798 172 aa8.93□□□□□ -0.98
PSEN1-223ENST00000557511 GPR17Q13304 367 aa8.93□□□□□ -0.98
PSEN1-223ENST00000557511 VEPH1Q14D04 833 aa8.93□□□□□ -0.98
PSEN1-223ENST00000557511 MAPRE1Q15691 268 aaKnown RBP8.93□□□□□ -0.98
PSEN1-223ENST00000557511 NFE2Q16621 373 aaPredicted RBP8.93□□□□□ -0.98
PSEN1-223ENST00000557511 TPD52L1Q16890 204 aaPredicted RBP8.93□□□□□ -0.98
PSEN1-223ENST00000557511 ZNF699Q32M78 642 aa8.93□□□□□ -0.98
PSEN1-223ENST00000557511 WDR72Q3MJ13 1102 aa8.93□□□□□ -0.98
PSEN1-223ENST00000557511 CCDC40Q4G0X9 1142 aa8.93□□□□□ -0.98
PSEN1-223ENST00000557511 ZNF667Q5HYK9 610 aa8.93□□□□□ -0.98
PSEN1-223ENST00000557511 CYP4A22Q5TCH4 519 aa8.93□□□□□ -0.98
PSEN1-223ENST00000557511 TCERG1LQ5VWI1 586 aa8.93□□□□□ -0.98
PSEN1-223ENST00000557511 WSCD1Q658N2 575 aa8.93□□□□□ -0.98
PSEN1-223ENST00000557511 TCEAL8Q8IYN2 117 aa8.93□□□□□ -0.98
PSEN1-223ENST00000557511 ADGRF2Q8IZF7 708 aa8.93□□□□□ -0.98
PSEN1-223ENST00000557511 ADSSL1Q8N142 457 aa8.93□□□□□ -0.98
PSEN1-223ENST00000557511 LEMD2Q8NC56 503 aa8.93□□□□□ -0.98
PSEN1-223ENST00000557511 SPATA20Q8TB22 786 aa8.93□□□□□ -0.98
PSEN1-223ENST00000557511 FAM200AQ8TCP9 573 aa8.93□□□□□ -0.98
PSEN1-223ENST00000557511 SPPL2BQ8TCT7 592 aa8.93□□□□□ -0.98
PSEN1-223ENST00000557511 PARD3BQ8TEW8 1205 aa8.93□□□□□ -0.98
PSEN1-223ENST00000557511 NECAB3Q96P71 396 aaPredicted RBP8.93□□□□□ -0.98
PSEN1-223ENST00000557511 PGLYRP2Q96PD5 576 aa8.93□□□□□ -0.98
PSEN1-223ENST00000557511 NUP62CLQ9H1M0 184 aa8.93□□□□□ -0.98
PSEN1-223ENST00000557511 POMKQ9H5K3 350 aa8.93□□□□□ -0.98
PSEN1-223ENST00000557511 MMRN2Q9H8L6 949 aa8.93□□□□□ -0.98
PSEN1-223ENST00000557511 METTL14Q9HCE5 456 aaKnown RBP8.93□□□□□ -0.98
PSEN1-223ENST00000557511 WDR6Q9NNW5 1121 aaKnown RBP8.93□□□□□ -0.98
PSEN1-223ENST00000557511 GDAP2Q9NXN4 497 aa8.93□□□□□ -0.98
PSEN1-223ENST00000557511 DDX43Q9NXZ2 648 aaKnown RBP8.93□□□□□ -0.98
PSEN1-223ENST00000557511 USTQ9Y2C2 406 aa8.93□□□□□ -0.98
PSEN1-223ENST00000557511 CLUHO75153 1309 aa8.93□□□□□ -0.98
PSEN1-223ENST00000557511 TCHHQ07283 1943 aa8.92□□□□□ -0.98
PSEN1-223ENST00000557511 LRRIQ3A6PVS8 624 aaPredicted RBP8.92□□□□□ -0.98
PSEN1-223ENST00000557511 ADAM12O43184 909 aa8.92□□□□□ -0.98
PSEN1-223ENST00000557511 TBC1D4O60343 1298 aa8.92□□□□□ -0.98
PSEN1-223ENST00000557511 AKAP3O75969 853 aa8.92□□□□□ -0.98
PSEN1-223ENST00000557511 GNA14O95837 355 aa8.92□□□□□ -0.98
PSEN1-223ENST00000557511 MBD3O95983 291 aa8.92□□□□□ -0.98
PSEN1-223ENST00000557511 POU2F2P09086 479 aa8.92□□□□□ -0.98
PSEN1-223ENST00000557511 FAM163BP0C2L3 166 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms