RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 FSHRP23945 695 aa17.03■□□□□ 0.32
TUBB3-214ENST00000557490 GBP2P32456 591 aaPredicted RBP17.03■□□□□ 0.32
TUBB3-214ENST00000557490 PPP1R2P41236 205 aa17.03■□□□□ 0.32
TUBB3-214ENST00000557490 CLDN10P78369 228 aa17.03■□□□□ 0.32
TUBB3-214ENST00000557490 MYL7Q01449 175 aa17.03■□□□□ 0.32
TUBB3-214ENST00000557490 TSPY1Q01534 308 aa17.03■□□□□ 0.32
TUBB3-214ENST00000557490 ISM2Q6H9L7 571 aa17.03■□□□□ 0.32
TUBB3-214ENST00000557490 INTS8Q75QN2 995 aaKnown RBP17.03■□□□□ 0.32
TUBB3-214ENST00000557490 DPH6Q7L8W6 267 aa17.03■□□□□ 0.32
TUBB3-214ENST00000557490 DCP1BQ8IZD4 617 aaKnown RBP17.03■□□□□ 0.32
TUBB3-214ENST00000557490 ADGRF2Q8IZF7 708 aa17.03■□□□□ 0.32
TUBB3-214ENST00000557490 ADSSL1Q8N142 457 aa17.03■□□□□ 0.32
TUBB3-214ENST00000557490 TMEM209Q96SK2 561 aa17.03■□□□□ 0.32
TUBB3-214ENST00000557490 RTP3Q9BQQ7 232 aa17.03■□□□□ 0.32
TUBB3-214ENST00000557490 DDX43Q9NXZ2 648 aaKnown RBP17.03■□□□□ 0.32
TUBB3-214ENST00000557490 ZFHX4Q86UP3 3567 aa17.03■□□□□ 0.32
TUBB3-214ENST00000557490 SCN1AP35498 2009 aa17.03■□□□□ 0.32
TUBB3-214ENST00000557490 MTMR11A4FU01 709 aa17.02■□□□□ 0.32
TUBB3-214ENST00000557490 PSMA7O14818 248 aa17.02■□□□□ 0.32
TUBB3-214ENST00000557490 IKBKBO14920 756 aa17.02■□□□□ 0.32
TUBB3-214ENST00000557490 AKAP3O75969 853 aa17.02■□□□□ 0.32
TUBB3-214ENST00000557490 CST3P01034 146 aaPredicted RBP17.02■□□□□ 0.32
TUBB3-214ENST00000557490 ATICP31939 592 aa17.02■□□□□ 0.32
TUBB3-214ENST00000557490 LHX1P48742 406 aa17.02■□□□□ 0.32
TUBB3-214ENST00000557490 VAMP7P51809 220 aa17.02■□□□□ 0.32
TUBB3-214ENST00000557490 TNNC1P63316 161 aa17.02■□□□□ 0.32
TUBB3-214ENST00000557490 TWF1Q12792 350 aa17.02■□□□□ 0.32
TUBB3-214ENST00000557490 SMARCB1Q12824 385 aa17.02■□□□□ 0.32
TUBB3-214ENST00000557490 DUSP4Q13115 394 aa17.02■□□□□ 0.32
TUBB3-214ENST00000557490 PLD1Q13393 1074 aa17.02■□□□□ 0.32
TUBB3-214ENST00000557490 PABPC1LQ4VXU2 614 aaKnown RBP17.02■□□□□ 0.32
TUBB3-214ENST00000557490 SLC39A12Q504Y0 691 aa17.02■□□□□ 0.32
TUBB3-214ENST00000557490 CENPPQ6IPU0 288 aa17.02■□□□□ 0.32
TUBB3-214ENST00000557490 CLEC17AQ6ZS10 378 aa17.02■□□□□ 0.32
TUBB3-214ENST00000557490 GET4Q7L5D6 327 aaPredicted RBP17.02■□□□□ 0.32
TUBB3-214ENST00000557490 SYAP1Q96A49 352 aaPredicted RBP17.02■□□□□ 0.32
TUBB3-214ENST00000557490 DHTKD1Q96HY7 919 aaPredicted RBP17.02■□□□□ 0.32
TUBB3-214ENST00000557490 GBP4Q96PP9 640 aa17.02■□□□□ 0.32
TUBB3-214ENST00000557490 MMS19Q96T76 1030 aa17.02■□□□□ 0.32
TUBB3-214ENST00000557490 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.02■□□□□ 0.323e-7■■■□□ 15.4
TUBB3-214ENST00000557490 LIMD1Q9UGP4 676 aa17.02■□□□□ 0.32
TUBB3-214ENST00000557490 MTCL1Q9Y4B5 1905 aaKnown RBP17.02■□□□□ 0.31
TUBB3-214ENST00000557490 SPTBN2O15020 2390 aa17.01■□□□□ 0.31
TUBB3-214ENST00000557490 BIN1O00499 593 aa17.01■□□□□ 0.31
TUBB3-214ENST00000557490 C4BPAP04003 597 aaKnown RBP17.01■□□□□ 0.31
TUBB3-214ENST00000557490 EPB41P11171 864 aaKnown RBP17.01■□□□□ 0.31
TUBB3-214ENST00000557490 PTPN2P17706 415 aa17.01■□□□□ 0.31
TUBB3-214ENST00000557490 PCSK1P29120 753 aa17.01■□□□□ 0.31
TUBB3-214ENST00000557490 ALDH1A3P47895 512 aa17.01■□□□□ 0.31
TUBB3-214ENST00000557490 MYL6P60660 151 aa17.01■□□□□ 0.31
TUBB3-214ENST00000557490 DLG4P78352 724 aa17.01■□□□□ 0.31
TUBB3-214ENST00000557490 NTHL1P78549 312 aa17.01■□□□□ 0.31
TUBB3-214ENST00000557490 LRRC63Q05C16 580 aa17.01■□□□□ 0.31
TUBB3-214ENST00000557490 ENPEPQ07075 957 aa17.01■□□□□ 0.31
TUBB3-214ENST00000557490 NCOA4Q13772 614 aa17.01■□□□□ 0.31
TUBB3-214ENST00000557490 SOWAHAQ2M3V2 549 aa17.01■□□□□ 0.31
TUBB3-214ENST00000557490 TDRD10Q5VZ19 366 aaKnown RBP17.01■□□□□ 0.31
TUBB3-214ENST00000557490 IQCEQ6IPM2 695 aa17.01■□□□□ 0.31
TUBB3-214ENST00000557490 FRMD5Q7Z6J6 570 aa17.01■□□□□ 0.31
TUBB3-214ENST00000557490 ATAD1Q8NBU5 361 aa17.01■□□□□ 0.31
TUBB3-214ENST00000557490 C2orf15Q8WU43 125 aaKnown RBP17.01■□□□□ 0.31
TUBB3-214ENST00000557490 NKD2Q969F2 451 aaPredicted RBP17.01■□□□□ 0.31
TUBB3-214ENST00000557490 ZNF512Q96ME7 567 aaPredicted RBP17.01■□□□□ 0.31
TUBB3-214ENST00000557490 ACBD6Q9BR61 282 aa17.01■□□□□ 0.31
TUBB3-214ENST00000557490 MKNK1Q9BUB5 465 aa17.01■□□□□ 0.31
TUBB3-214ENST00000557490 HCFC1R1Q9NWW0 138 aa17.01■□□□□ 0.31
TUBB3-214ENST00000557490 DNMT3BQ9UBC3 853 aaKnown RBP17.01■□□□□ 0.31
TUBB3-214ENST00000557490 HSFX1Q9UBD0 423 aa17.01■□□□□ 0.31
TUBB3-214ENST00000557490 YIPF1Q9Y548 306 aa17.01■□□□□ 0.31
TUBB3-214ENST00000557490 CHD8Q9HCK8 2581 aa17.01■□□□□ 0.31
TUBB3-214ENST00000557490 VNN2O95498 520 aa17■□□□□ 0.31
TUBB3-214ENST00000557490 STAU1O95793 577 aaKnown RBP17■□□□□ 0.31
TUBB3-214ENST00000557490 RHOP08100 348 aa17■□□□□ 0.31
TUBB3-214ENST00000557490 CCNE1P24864 410 aa17■□□□□ 0.31
TUBB3-214ENST00000557490 TUFMP49411 452 aaKnown RBP17■□□□□ 0.31
TUBB3-214ENST00000557490 EPHB3P54753 998 aa17■□□□□ 0.31
TUBB3-214ENST00000557490 FKBP3Q00688 224 aaKnown RBP17■□□□□ 0.31
TUBB3-214ENST00000557490 MORC3Q14149 939 aa17■□□□□ 0.31
TUBB3-214ENST00000557490 CAMK4Q16566 473 aa17■□□□□ 0.31
TUBB3-214ENST00000557490 NFE2Q16621 373 aaPredicted RBP17■□□□□ 0.31
TUBB3-214ENST00000557490 WDR72Q3MJ13 1102 aa17■□□□□ 0.31
TUBB3-214ENST00000557490 ANKRD40Q6AI12 368 aa17■□□□□ 0.31
TUBB3-214ENST00000557490 OSTM1Q86WC4 334 aa17■□□□□ 0.31
TUBB3-214ENST00000557490 MYADMQ96S97 322 aa17■□□□□ 0.31
TUBB3-214ENST00000557490 CORO1BQ9BR76 489 aa17■□□□□ 0.31
TUBB3-214ENST00000557490 NXF1Q9UBU9 619 aaKnown RBP17■□□□□ 0.31
TUBB3-214ENST00000557490 SLC27A5Q9Y2P5 690 aa17■□□□□ 0.31
TUBB3-214ENST00000557490 MRPS23Q9Y3D9 190 aaKnown RBP17■□□□□ 0.31
TUBB3-214ENST00000557490 ZFP37Q9Y6Q3 630 aaPredicted RBP17■□□□□ 0.31
TUBB3-214ENST00000557490 CFAP47Q6ZTR5 3102 aa16.99■□□□□ 0.31
TUBB3-214ENST00000557490 GABRDO14764 452 aa16.99■□□□□ 0.31
TUBB3-214ENST00000557490 FAM163BP0C2L3 166 aa16.99■□□□□ 0.31
TUBB3-214ENST00000557490 WARSP23381 471 aaKnown RBP16.99■□□□□ 0.31
TUBB3-214ENST00000557490 ACAT1P24752 427 aaKnown RBP16.99■□□□□ 0.31
TUBB3-214ENST00000557490 PTPN21Q16825 1174 aa16.99■□□□□ 0.31
TUBB3-214ENST00000557490 ZNF699Q32M78 642 aa16.99■□□□□ 0.31
TUBB3-214ENST00000557490 MGAT5BQ3V5L5 792 aa16.99■□□□□ 0.31
TUBB3-214ENST00000557490 ZACNQ401N2 412 aa16.99■□□□□ 0.31
TUBB3-214ENST00000557490 ZNF667Q5HYK9 610 aa16.99■□□□□ 0.31
TUBB3-214ENST00000557490 INTS6LQ5JSJ4 861 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms