RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 UPP1Q16831 310 aa6.42□□□□□ -1.38
VPS33B-207ENST00000557470 WDR44Q5JSH3 913 aa6.42□□□□□ -1.38
VPS33B-207ENST00000557470 HEATR6Q6AI08 1181 aaKnown RBP6.42□□□□□ -1.38
VPS33B-207ENST00000557470 Q6ZS52 159 aa6.42□□□□□ -1.38
VPS33B-207ENST00000557470 PDZD4Q76G19 769 aaPredicted RBP6.42□□□□□ -1.38
VPS33B-207ENST00000557470 RUFY3Q7L099 469 aa6.42□□□□□ -1.38
VPS33B-207ENST00000557470 TCEAL8Q8IYN2 117 aa6.42□□□□□ -1.38
VPS33B-207ENST00000557470 SPEM1Q8N4L4 309 aa6.42□□□□□ -1.38
VPS33B-207ENST00000557470 SMARCD2Q92925 531 aa6.42□□□□□ -1.38
VPS33B-207ENST00000557470 ZNF274Q96GC6 653 aaPredicted RBP6.42□□□□□ -1.38
VPS33B-207ENST00000557470 ADPGKQ9BRR6 497 aa6.42□□□□□ -1.38
VPS33B-207ENST00000557470 KIFC3Q9BVG8 833 aa6.42□□□□□ -1.38
VPS33B-207ENST00000557470 CYP4F11Q9HBI6 524 aa6.42□□□□□ -1.38
VPS33B-207ENST00000557470 TRPV5Q9NQA5 729 aa6.42□□□□□ -1.38
VPS33B-207ENST00000557470 C2orf42Q9NWW7 574 aa6.42□□□□□ -1.38
VPS33B-207ENST00000557470 PCDHA12Q9UN75 941 aa6.42□□□□□ -1.38
VPS33B-207ENST00000557470 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.42□□□□□ -1.38
VPS33B-207ENST00000557470 INSL5Q9Y5Q6 135 aa6.42□□□□□ -1.38
VPS33B-207ENST00000557470 IGF2RP11717 2491 aa6.42□□□□□ -1.38
VPS33B-207ENST00000557470 TICRRQ7Z2Z1 1910 aa6.42□□□□□ -1.38
VPS33B-207ENST00000557470 SMIM28A0A1B0GU29 152 aa6.41□□□□□ -1.38
VPS33B-207ENST00000557470 SLC38A8A6NNN8 435 aa6.41□□□□□ -1.38
VPS33B-207ENST00000557470 HEPACAM2A8MVW5 462 aa6.41□□□□□ -1.38
VPS33B-207ENST00000557470 ACKR2O00590 384 aa6.41□□□□□ -1.38
VPS33B-207ENST00000557470 ZNF197O14709 1029 aa6.41□□□□□ -1.38
VPS33B-207ENST00000557470 ZNF263O14978 683 aa6.41□□□□□ -1.38
VPS33B-207ENST00000557470 SPINT1O43278 529 aa6.41□□□□□ -1.38
VPS33B-207ENST00000557470 TRAPPC3O43617 180 aa6.41□□□□□ -1.38
VPS33B-207ENST00000557470 LILRA1O75019 489 aa6.41□□□□□ -1.38
VPS33B-207ENST00000557470 PAPSS2O95340 614 aaPredicted RBP6.41□□□□□ -1.38
VPS33B-207ENST00000557470 FBXO45P0C2W1 286 aa6.41□□□□□ -1.38
VPS33B-207ENST00000557470 SPATA31C1P0DKV0 1188 aa6.41□□□□□ -1.38
VPS33B-207ENST00000557470 MYL4P12829 197 aa6.41□□□□□ -1.38
VPS33B-207ENST00000557470 ATF2P15336 505 aa6.41□□□□□ -1.38
VPS33B-207ENST00000557470 CNR2P34972 360 aa6.41□□□□□ -1.38
VPS33B-207ENST00000557470 CTSOP43234 321 aaPredicted RBP6.41□□□□□ -1.38
VPS33B-207ENST00000557470 SOX9P48436 509 aa6.41□□□□□ -1.38
VPS33B-207ENST00000557470 SHC2P98077 582 aa6.41□□□□□ -1.38
VPS33B-207ENST00000557470 SCRN1Q12765 414 aa6.41□□□□□ -1.38
VPS33B-207ENST00000557470 SF3A2Q15428 464 aaKnown RBP6.41□□□□□ -1.38
VPS33B-207ENST00000557470 CCDC6Q16204 474 aa6.41□□□□□ -1.38
VPS33B-207ENST00000557470 DCAF4L1Q3SXM0 396 aa6.41□□□□□ -1.38
VPS33B-207ENST00000557470 AASDHQ4L235 1098 aaPredicted RBP6.41□□□□□ -1.38
VPS33B-207ENST00000557470 N4BP2L1Q5TBK1 243 aaPredicted RBP6.41□□□□□ -1.38
VPS33B-207ENST00000557470 CYP4A22Q5TCH4 519 aa6.41□□□□□ -1.38
VPS33B-207ENST00000557470 NT5DC1Q5TFE4 455 aa6.41□□□□□ -1.38
VPS33B-207ENST00000557470 IL31Q6EBC2 164 aa6.41□□□□□ -1.38
VPS33B-207ENST00000557470 TXNDC11Q6PKC3 985 aa6.41□□□□□ -1.38
VPS33B-207ENST00000557470 CPLX2Q6PUV4 134 aaKnown RBP6.41□□□□□ -1.38
VPS33B-207ENST00000557470 JAZF1Q86VZ6 243 aa6.41□□□□□ -1.38
VPS33B-207ENST00000557470 LONP2Q86WA8 852 aa6.41□□□□□ -1.38
VPS33B-207ENST00000557470 MCPH1Q8NEM0 835 aa6.41□□□□□ -1.38
VPS33B-207ENST00000557470 DEPTORQ8TB45 409 aa6.41□□□□□ -1.38
VPS33B-207ENST00000557470 ZSCAN18Q8TBC5 510 aaPredicted RBP6.41□□□□□ -1.38
VPS33B-207ENST00000557470 DEPDC1BQ8WUY9 529 aa6.41□□□□□ -1.38
VPS33B-207ENST00000557470 DDX1Q92499 740 aaKnown RBP6.41□□□□□ -1.38
VPS33B-207ENST00000557470 TNFRSF25Q93038 417 aa6.41□□□□□ -1.38
VPS33B-207ENST00000557470 RSPRY1Q96DX4 576 aa6.41□□□□□ -1.38
VPS33B-207ENST00000557470 UROC1Q96N76 676 aa6.41□□□□□ -1.38
VPS33B-207ENST00000557470 C2orf40Q9H1Z8 148 aa6.41□□□□□ -1.38
VPS33B-207ENST00000557470 TTC12Q9H892 705 aaPredicted RBP6.41□□□□□ -1.38
VPS33B-207ENST00000557470 ZNF395Q9H8N7 513 aaPredicted RBP6.41□□□□□ -1.38
VPS33B-207ENST00000557470 TRPV4Q9HBA0 871 aa6.41□□□□□ -1.38
VPS33B-207ENST00000557470 RXFP3Q9NSD7 469 aa6.41□□□□□ -1.38
VPS33B-207ENST00000557470 CEP72Q9P209 647 aa6.41□□□□□ -1.38
VPS33B-207ENST00000557470 STK17AQ9UEE5 414 aa6.41□□□□□ -1.38
VPS33B-207ENST00000557470 FBXL5Q9UKA1 691 aa6.41□□□□□ -1.38
VPS33B-207ENST00000557470 STK36Q9NRP7 1315 aa6.41□□□□□ -1.38
VPS33B-207ENST00000557470 SDK1Q7Z5N4 2213 aa6.41□□□□□ -1.38
VPS33B-207ENST00000557470 ASPMQ8IZT6 3477 aa6.4□□□□□ -1.38
VPS33B-207ENST00000557470 ESPNB1AK53 854 aa6.4□□□□□ -1.38
VPS33B-207ENST00000557470 H7C4K7 107 aa6.4□□□□□ -1.38
VPS33B-207ENST00000557470 PODXLO00592 558 aa6.4□□□□□ -1.38
VPS33B-207ENST00000557470 TM4SF5O14894 197 aa6.4□□□□□ -1.38
VPS33B-207ENST00000557470 SYN3O14994 580 aa6.4□□□□□ -1.38
VPS33B-207ENST00000557470 NEMFO60524 1076 aa6.4□□□□□ -1.38
VPS33B-207ENST00000557470 FOXD2O60548 495 aaPredicted RBP6.4□□□□□ -1.38
VPS33B-207ENST00000557470 MED24O75448 989 aa6.4□□□□□ -1.38
VPS33B-207ENST00000557470 CDKL5O76039 1030 aa6.4□□□□□ -1.38
VPS33B-207ENST00000557470 VSIG8P0DPA2 414 aa6.4□□□□□ -1.38
VPS33B-207ENST00000557470 XRCC6P12956 609 aaKnown RBP eCLIP6.4□□□□□ -1.38
VPS33B-207ENST00000557470 XBP1P17861 261 aa6.4□□□□□ -1.38
VPS33B-207ENST00000557470 KRT2P35908 639 aa6.4□□□□□ -1.38
VPS33B-207ENST00000557470 TXKP42681 527 aa6.4□□□□□ -1.38
VPS33B-207ENST00000557470 NAMPTP43490 491 aa6.4□□□□□ -1.38
VPS33B-207ENST00000557470 LIMK1P53667 647 aa6.4□□□□□ -1.38
VPS33B-207ENST00000557470 EPHA5P54756 1037 aa6.4□□□□□ -1.38
VPS33B-207ENST00000557470 TWF1Q12792 350 aa6.4□□□□□ -1.38
VPS33B-207ENST00000557470 LRRC32Q14392 662 aa6.4□□□□□ -1.38
VPS33B-207ENST00000557470 TEAD2Q15562 447 aa6.4□□□□□ -1.38
VPS33B-207ENST00000557470 CTXN3Q4LDR2 81 aa6.4□□□□□ -1.38
VPS33B-207ENST00000557470 ATF7IP2Q5U623 682 aa6.4□□□□□ -1.38
VPS33B-207ENST00000557470 TPGS2Q68CL5 300 aa6.4□□□□□ -1.38
VPS33B-207ENST00000557470 IQCEQ6IPM2 695 aa6.4□□□□□ -1.38
VPS33B-207ENST00000557470 ALKAL1Q6UXT8 129 aa6.4□□□□□ -1.38
VPS33B-207ENST00000557470 CEP68Q76N32 757 aa6.4□□□□□ -1.38
VPS33B-207ENST00000557470 WDR5BQ86VZ2 330 aa6.4□□□□□ -1.38
VPS33B-207ENST00000557470 CATSPER3Q86XQ3 398 aa6.4□□□□□ -1.38
VPS33B-207ENST00000557470 MFSD6LQ8IWD5 586 aa6.4□□□□□ -1.38
VPS33B-207ENST00000557470 ELMOD1Q8N336 334 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms