RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-231	ENST00000557336	CCNE1	P24864	410 aa		12.09	□□□□□ -0.47
HNRNPC-231	ENST00000557336	DDIT3	P35638	169 aa		12.09	□□□□□ -0.47
HNRNPC-231	ENST00000557336	EPHB3	P54753	998 aa		12.09	□□□□□ -0.47
HNRNPC-231	ENST00000557336	MLLT6	P55198	1093 aa	Predicted RBP	12.09	□□□□□ -0.47
HNRNPC-231	ENST00000557336	DMWD	Q09019	674 aa		12.09	□□□□□ -0.47
HNRNPC-231	ENST00000557336	ZNF720	Q7Z2F6	126 aa		12.09	□□□□□ -0.47
HNRNPC-231	ENST00000557336	USP37	Q86T82	979 aa		12.09	□□□□□ -0.47
HNRNPC-231	ENST00000557336	TMEM150A	Q86TG1	271 aa		12.09	□□□□□ -0.47
HNRNPC-231	ENST00000557336	CD302	Q8IX05	232 aa		12.09	□□□□□ -0.47
HNRNPC-231	ENST00000557336	EFCAB13	Q8IY85	973 aa		12.09	□□□□□ -0.47
HNRNPC-231	ENST00000557336	TTC13	Q8NBP0	860 aa		12.09	□□□□□ -0.47
HNRNPC-231	ENST00000557336	CXorf38	Q8TB03	319 aa		12.09	□□□□□ -0.47
HNRNPC-231	ENST00000557336	ATRIP	Q8WXE1	791 aa		12.09	□□□□□ -0.47
HNRNPC-231	ENST00000557336	LARP4B	Q92615	738 aa	Known RBP	12.09	□□□□□ -0.47
HNRNPC-231	ENST00000557336	DNAJC19	Q96DA6	116 aa		12.09	□□□□□ -0.47
HNRNPC-231	ENST00000557336	CALML4	Q96GE6	196 aa		12.09	□□□□□ -0.47
HNRNPC-231	ENST00000557336	ZFYVE19	Q96K21	471 aa		12.09	□□□□□ -0.47
HNRNPC-231	ENST00000557336	FAM84A	Q96KN4	292 aa		12.09	□□□□□ -0.47
HNRNPC-231	ENST00000557336	GPR88	Q9GZN0	384 aa		12.09	□□□□□ -0.47
HNRNPC-231	ENST00000557336	ZCWPW1	Q9H0M4	648 aa		12.09	□□□□□ -0.47
HNRNPC-231	ENST00000557336	PARD6A	Q9NPB6	346 aa		12.09	□□□□□ -0.47
HNRNPC-231	ENST00000557336	RBM12	Q9NTZ6	932 aa	Known RBP	12.09	□□□□□ -0.47
HNRNPC-231	ENST00000557336	SMG5	Q9UPR3	1016 aa	Known RBP	12.09	□□□□□ -0.47
HNRNPC-231	ENST00000557336	DERA	Q9Y315	318 aa		12.09	□□□□□ -0.47
HNRNPC-231	ENST00000557336	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	12.09	□□□□□ -0.47
HNRNPC-231	ENST00000557336	CLIC4	Q9Y696	253 aa		12.09	□□□□□ -0.47
HNRNPC-231	ENST00000557336	TICRR	Q7Z2Z1	1910 aa		12.09	□□□□□ -0.47
HNRNPC-231	ENST00000557336	MYMK	A6NI61	221 aa		12.08	□□□□□ -0.48
HNRNPC-231	ENST00000557336	SLC38A8	A6NNN8	435 aa		12.08	□□□□□ -0.48
HNRNPC-231	ENST00000557336	CHAD	O15335	359 aa		12.08	□□□□□ -0.48
HNRNPC-231	ENST00000557336	ODC1	P11926	461 aa		12.08	□□□□□ -0.48
HNRNPC-231	ENST00000557336	SATB1	Q01826	763 aa		12.08	□□□□□ -0.48
HNRNPC-231	ENST00000557336	CUL4A	Q13619	759 aa		12.08	□□□□□ -0.48
HNRNPC-231	ENST00000557336	TMEM132D	Q14C87	1099 aa		12.08	□□□□□ -0.48
HNRNPC-231	ENST00000557336	ADAL	Q6DHV7	355 aa		12.08	□□□□□ -0.48
HNRNPC-231	ENST00000557336	SMYD5	Q6GMV2	418 aa		12.08	□□□□□ -0.48
HNRNPC-231	ENST00000557336	FAM173B	Q6P4H8	233 aa		12.08	□□□□□ -0.48
HNRNPC-231	ENST00000557336	BRAP	Q7Z569	592 aa		12.08	□□□□□ -0.48
HNRNPC-231	ENST00000557336	SFR1	Q86XK3	245 aa		12.08	□□□□□ -0.48
HNRNPC-231	ENST00000557336	CHFR	Q96EP1	664 aa		12.08	□□□□□ -0.48
HNRNPC-231	ENST00000557336	LPIN3	Q9BQK8	851 aa		12.08	□□□□□ -0.48
HNRNPC-231	ENST00000557336	ZHX3	Q9H4I2	956 aa		12.08	□□□□□ -0.48
HNRNPC-231	ENST00000557336	SLITRK6	Q9H5Y7	841 aa		12.08	□□□□□ -0.48
HNRNPC-231	ENST00000557336	ASB7	Q9H672	318 aa		12.08	□□□□□ -0.48
HNRNPC-231	ENST00000557336	TMLHE	Q9NVH6	421 aa		12.08	□□□□□ -0.48
HNRNPC-231	ENST00000557336	HSFX1	Q9UBD0	423 aa		12.08	□□□□□ -0.48
HNRNPC-231	ENST00000557336	FBXO2	Q9UK22	296 aa	Predicted RBP	12.08	□□□□□ -0.48
HNRNPC-231	ENST00000557336	C2CD2	Q9Y426	696 aa		12.08	□□□□□ -0.48
HNRNPC-231	ENST00000557336	ASB3	Q9Y575	518 aa		12.08	□□□□□ -0.48
HNRNPC-231	ENST00000557336	TSC2	P49815	1807 aa		12.08	□□□□□ -0.48
HNRNPC-231	ENST00000557336	MYBPHL	A2RUH7	354 aa		12.07	□□□□□ -0.48
HNRNPC-231	ENST00000557336		K7ESF4	209 aa		12.07	□□□□□ -0.48
HNRNPC-231	ENST00000557336	CYB561D2	O14569	222 aa		12.07	□□□□□ -0.48
HNRNPC-231	ENST00000557336	XPOT	O43592	962 aa	Known RBP	12.07	□□□□□ -0.48
HNRNPC-231	ENST00000557336	ANK1	P16157	1881 aa		12.07	□□□□□ -0.48
HNRNPC-231	ENST00000557336	HMGA1	P17096	107 aa	Known RBP	12.07	□□□□□ -0.48
HNRNPC-231	ENST00000557336	GABRR2	P28476	465 aa		12.07	□□□□□ -0.48
HNRNPC-231	ENST00000557336	WEE1	P30291	646 aa		12.07	□□□□□ -0.48
HNRNPC-231	ENST00000557336	ALDH1A3	P47895	512 aa		12.07	□□□□□ -0.48
HNRNPC-231	ENST00000557336	CYP4F8	P98187	520 aa		12.07	□□□□□ -0.48
HNRNPC-231	ENST00000557336	PLD1	Q13393	1074 aa		12.07	□□□□□ -0.48
HNRNPC-231	ENST00000557336	PUM1	Q14671	1186 aa	Known RBP eCLIP	12.07	□□□□□ -0.48
HNRNPC-231	ENST00000557336	RSPO4	Q2I0M5	234 aa	Predicted RBP	12.07	□□□□□ -0.48
HNRNPC-231	ENST00000557336	SLC39A12	Q504Y0	691 aa		12.07	□□□□□ -0.48
HNRNPC-231	ENST00000557336	WSCD1	Q658N2	575 aa		12.07	□□□□□ -0.48
HNRNPC-231	ENST00000557336		Q6ZS52	159 aa		12.07	□□□□□ -0.48
HNRNPC-231	ENST00000557336	DYM	Q7RTS9	669 aa		12.07	□□□□□ -0.48
HNRNPC-231	ENST00000557336	TTC8	Q8TAM2	541 aa		12.07	□□□□□ -0.48
HNRNPC-231	ENST00000557336	RIN3	Q8TB24	985 aa		12.07	□□□□□ -0.48
HNRNPC-231	ENST00000557336	RNF166	Q96A37	237 aa	Predicted RBP	12.07	□□□□□ -0.48
HNRNPC-231	ENST00000557336	E2F7	Q96AV8	911 aa		12.07	□□□□□ -0.48
HNRNPC-231	ENST00000557336	CLIC6	Q96NY7	704 aa		12.07	□□□□□ -0.48
HNRNPC-231	ENST00000557336	HINFP	Q9BQA5	517 aa		12.07	□□□□□ -0.48
HNRNPC-231	ENST00000557336	SLC46A2	Q9BY10	475 aa		12.07	□□□□□ -0.48
HNRNPC-231	ENST00000557336	FAM126A	Q9BYI3	521 aa	Predicted RBP	12.07	□□□□□ -0.48
HNRNPC-231	ENST00000557336	FGFBP2	Q9BYJ0	223 aa		12.07	□□□□□ -0.48
HNRNPC-231	ENST00000557336	SMG9	Q9H0W8	520 aa	Known RBP	12.07	□□□□□ -0.48
HNRNPC-231	ENST00000557336	DPP3	Q9NY33	737 aa		12.07	□□□□□ -0.48
HNRNPC-231	ENST00000557336	GTSE1	Q9NYZ3	720 aa		12.07	□□□□□ -0.48
HNRNPC-231	ENST00000557336	AGO2	Q9UKV8	859 aa	Known RBP	12.07	□□□□□ -0.48
HNRNPC-231	ENST00000557336		A0A087X0B3	334 aa		12.06	□□□□□ -0.48
HNRNPC-231	ENST00000557336	OTOL1	A6NHN0	477 aa	Predicted RBP	12.06	□□□□□ -0.48
HNRNPC-231	ENST00000557336	SPECC1L-ADORA2A	F8WAN1	911 aa		12.06	□□□□□ -0.48
HNRNPC-231	ENST00000557336	TBCA	O75347	108 aa	Known RBP	12.06	□□□□□ -0.48
HNRNPC-231	ENST00000557336	BMP15	O95972	392 aa		12.06	□□□□□ -0.48
HNRNPC-231	ENST00000557336	KRT18	P05783	430 aa	Known RBP	12.06	□□□□□ -0.48
HNRNPC-231	ENST00000557336	PAX3	P23760	479 aa		12.06	□□□□□ -0.48
HNRNPC-231	ENST00000557336	CTH	P32929	405 aa		12.06	□□□□□ -0.48
HNRNPC-231	ENST00000557336	MCM2	P49736	904 aa		12.06	□□□□□ -0.48
HNRNPC-231	ENST00000557336	CASP5	P51878	434 aa		12.06	□□□□□ -0.48
HNRNPC-231	ENST00000557336	POU5F1	Q01860	360 aa	Known RBP	12.06	□□□□□ -0.48
HNRNPC-231	ENST00000557336	TNK2	Q07912	1038 aa		12.06	□□□□□ -0.48
HNRNPC-231	ENST00000557336	REST	Q13127	1097 aa		12.06	□□□□□ -0.48
HNRNPC-231	ENST00000557336	CCDC142	Q17RM4	750 aa		12.06	□□□□□ -0.48
HNRNPC-231	ENST00000557336	GPR158	Q5T848	1215 aa		12.06	□□□□□ -0.48
HNRNPC-231	ENST00000557336	ARMCX5	Q6P1M9	558 aa		12.06	□□□□□ -0.48
HNRNPC-231	ENST00000557336	DGLUCY	Q7Z3D6	616 aa		12.06	□□□□□ -0.48
HNRNPC-231	ENST00000557336	GIPC2	Q8TF65	315 aa		12.06	□□□□□ -0.48
HNRNPC-231	ENST00000557336	PYM1	Q9BRP8	204 aa	Known RBP	12.06	□□□□□ -0.48
HNRNPC-231	ENST00000557336	ATXN3L	Q9H3M9	355 aa		12.06	□□□□□ -0.48

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