RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 LRRN4CLQ8ND94 238 aa5.48□□□□□ -1.53
ATXN3-247ENST00000557311 TRAPPC12Q8WVT3 735 aa5.48□□□□□ -1.53
ATXN3-247ENST00000557311 RIN2Q8WYP3 895 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-247ENST00000557311 TMEM169Q96HH4 297 aa5.48□□□□□ -1.53
ATXN3-247ENST00000557311 PAIP2Q9BPZ3 127 aaKnown RBP5.48□□□□□ -1.53
ATXN3-247ENST00000557311 SLC9A2Q9UBY0 812 aa5.48□□□□□ -1.53
ATXN3-247ENST00000557311 DUSP13Q9UII6 198 aa5.48□□□□□ -1.53
ATXN3-247ENST00000557311 ADAMTS6Q9UKP5 1117 aa5.48□□□□□ -1.53
ATXN3-247ENST00000557311 SIT1Q9Y3P8 196 aa5.48□□□□□ -1.53
ATXN3-247ENST00000557311 ST14Q9Y5Y6 855 aa5.48□□□□□ -1.53
ATXN3-247ENST00000557311 UBIAD1Q9Y5Z9 338 aa5.48□□□□□ -1.53
ATXN3-247ENST00000557311 GVINP1Q7Z2Y8 2422 aa5.48□□□□□ -1.53
ATXN3-247ENST00000557311 TTC3P53804 2025 aa5.48□□□□□ -1.53
ATXN3-247ENST00000557311 C5orf42Q9H799 3197 aa5.48□□□□□ -1.53
ATXN3-247ENST00000557311 SALL3Q9BXA9 1300 aa5.48□□□□□ -1.53
ATXN3-247ENST00000557311 KMT2EQ8IZD2 1858 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 TRIOO75962 3097 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-247ENST00000557311 WASH4PA8MWX3 477 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 NT5C1B-RDH14C9J2C7 533 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 RGS13O14921 159 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 NARSO43776 548 aaKnown RBP5.47□□□□□ -1.53
ATXN3-247ENST00000557311 CLEC3AO75596 197 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 DCNP07585 359 aaKnown RBP5.47□□□□□ -1.53
ATXN3-247ENST00000557311 CTSAP10619 480 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 SDSP20132 328 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 SMARCA1P28370 1054 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 PBX3P40426 434 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 BCAR1P56945 870 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 ACTR2P61160 394 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 TROAPQ12815 778 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 ZNF528Q3MIS6 628 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 ZNF484Q5JVG2 852 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 SPECC1Q5M775 1068 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 CYP26C1Q6V0L0 522 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 C15orf39Q6ZRI6 1047 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 NLRC3Q7RTR2 1065 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 DDX53Q86TM3 631 aaKnown RBP5.47□□□□□ -1.53
ATXN3-247ENST00000557311 FAM228AQ86W67 206 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 ECHDC2Q86YB7 292 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 REXO1Q8N1G1 1221 aaKnown RBP5.47□□□□□ -1.53
ATXN3-247ENST00000557311 ZNF513Q8N8E2 541 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-247ENST00000557311 CPLX3Q8WVH0 158 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 TMEM40Q8WWA1 233 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 ATRIPQ8WXE1 791 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 RSPH1Q8WYR4 309 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 STAMQ92783 540 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 SHDQ96IW2 340 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 CHAMP1Q96JM3 812 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 MYCBPQ99417 103 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-247ENST00000557311 SDF4Q9BRK5 362 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 RTKNQ9BST9 563 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 ASPNQ9BXN1 380 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 MRPL9Q9BYD2 267 aaKnown RBP5.47□□□□□ -1.53
ATXN3-247ENST00000557311 KRTAP4-9Q9BYQ8 210 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 MKRN2Q9H000 416 aaKnown RBP5.47□□□□□ -1.53
ATXN3-247ENST00000557311 ZBP1Q9H171 429 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 CCSER2Q9H7U1 834 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 PSTPIP2Q9H939 334 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 SFXN1Q9H9B4 322 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 TBC1D17Q9HA65 648 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 SEMA3GQ9NS98 782 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 DLGAP2Q9P1A6 1054 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 NCDNQ9UBB6 729 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 STK39Q9UEW8 545 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 RCAN3Q9UKA8 241 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 CA14Q9ULX7 337 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 MYO15AQ9UKN7 3530 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 EP300Q09472 2414 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-247ENST00000557311 CACNA1BQ00975 2339 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 DCHS1Q96JQ0 3298 aa5.47□□□□□ -1.53
ATXN3-247ENST00000557311 RALGAPA2Q2PPJ7 1873 aa5.46□□□□□ -1.54
ATXN3-247ENST00000557311 IGKV6D-21A0A0A0MT36 114 aa5.46□□□□□ -1.54
ATXN3-247ENST00000557311 A0A0U1RQF3 1178 aa5.46□□□□□ -1.54
ATXN3-247ENST00000557311 ERICH2A1L162 156 aa5.46□□□□□ -1.54
ATXN3-247ENST00000557311 CCDC66A2RUB6 948 aa5.46□□□□□ -1.54
ATXN3-247ENST00000557311 IFIT3O14879 490 aaKnown RBP5.46□□□□□ -1.54
ATXN3-247ENST00000557311 GPR32O75388 356 aa5.46□□□□□ -1.54
ATXN3-247ENST00000557311 ATE1O95260 518 aa5.46□□□□□ -1.54
ATXN3-247ENST00000557311 ADRB1P08588 477 aa5.46□□□□□ -1.54
ATXN3-247ENST00000557311 SRFP11831 508 aa5.46□□□□□ -1.54
ATXN3-247ENST00000557311 JUNBP17275 347 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-247ENST00000557311 VAMP1P23763 118 aa5.46□□□□□ -1.54
ATXN3-247ENST00000557311 KLRC2P26717 231 aa5.46□□□□□ -1.54
ATXN3-247ENST00000557311 METAP2P50579 478 aaKnown RBP eCLIP5.46□□□□□ -1.54
ATXN3-247ENST00000557311 HK2P52789 917 aa5.46□□□□□ -1.54
ATXN3-247ENST00000557311 EGR3Q06889 387 aa5.46□□□□□ -1.54
ATXN3-247ENST00000557311 RAD51AP2Q09MP3 1159 aa5.46□□□□□ -1.54
ATXN3-247ENST00000557311 TRDNQ13061 729 aa5.46□□□□□ -1.54
ATXN3-247ENST00000557311 PTPN14Q15678 1187 aa5.46□□□□□ -1.54
ATXN3-247ENST00000557311 KIZQ2M2Z5 673 aa5.46□□□□□ -1.54
ATXN3-247ENST00000557311 CLLU1OSQ5K130 101 aa5.46□□□□□ -1.54
ATXN3-247ENST00000557311 FAM160B1Q5W0V3 765 aa5.46□□□□□ -1.54
ATXN3-247ENST00000557311 DCLRE1AQ6PJP8 1040 aa5.46□□□□□ -1.54
ATXN3-247ENST00000557311 TMPRSS7Q7RTY8 843 aa5.46□□□□□ -1.54
ATXN3-247ENST00000557311 CATIPQ7Z7H3 387 aa5.46□□□□□ -1.54
ATXN3-247ENST00000557311 SLITRK4Q8IW52 837 aa5.46□□□□□ -1.54
ATXN3-247ENST00000557311 POU5F2Q8N7G0 328 aa5.46□□□□□ -1.54
ATXN3-247ENST00000557311 RNF169Q8NCN4 708 aa5.46□□□□□ -1.54
ATXN3-247ENST00000557311 CMASQ8NFW8 434 aaPredicted RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms