RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 LMNB2Q03252 620 aa9.46□□□□□ -0.9
VRK1-206ENST00000557222 SOX4Q06945 474 aaPredicted RBP9.46□□□□□ -0.9
VRK1-206ENST00000557222 ECM1Q16610 540 aa9.46□□□□□ -0.9
VRK1-206ENST00000557222 SLC5A9Q2M3M2 681 aa9.46□□□□□ -0.9
VRK1-206ENST00000557222 ZNF568Q3ZCX4 644 aa9.46□□□□□ -0.9
VRK1-206ENST00000557222 GLRA4Q5JXX5 417 aa9.46□□□□□ -0.9
VRK1-206ENST00000557222 IQCEQ6IPM2 695 aa9.46□□□□□ -0.9
VRK1-206ENST00000557222 MPZL3Q6UWV2 235 aa9.46□□□□□ -0.9
VRK1-206ENST00000557222 PDZD4Q76G19 769 aaPredicted RBP9.46□□□□□ -0.9
VRK1-206ENST00000557222 MAP4K3Q8IVH8 894 aa9.46□□□□□ -0.9
VRK1-206ENST00000557222 DEPDC4Q8N2C3 294 aa9.46□□□□□ -0.9
VRK1-206ENST00000557222 DCLK2Q8N568 766 aa9.46□□□□□ -0.9
VRK1-206ENST00000557222 C3orf58Q8NDZ4 430 aa9.46□□□□□ -0.9
VRK1-206ENST00000557222 ING5Q8WYH8 240 aa9.46□□□□□ -0.9
VRK1-206ENST00000557222 SMARCD2Q92925 531 aa9.46□□□□□ -0.9
VRK1-206ENST00000557222 KCNN1Q92952 543 aa9.46□□□□□ -0.9
VRK1-206ENST00000557222 ZNF512Q96ME7 567 aaPredicted RBP9.46□□□□□ -0.9
VRK1-206ENST00000557222 ASB16Q96NS5 453 aa9.46□□□□□ -0.9
VRK1-206ENST00000557222 TSPAN18Q96SJ8 248 aa9.46□□□□□ -0.9
VRK1-206ENST00000557222 KIFC3Q9BVG8 833 aa9.46□□□□□ -0.9
VRK1-206ENST00000557222 TRMT61BQ9BVS5 477 aaKnown RBP9.46□□□□□ -0.9
VRK1-206ENST00000557222 PLA2G2FQ9BZM2 168 aa9.46□□□□□ -0.9
VRK1-206ENST00000557222 CHRDQ9H2X0 955 aa9.46□□□□□ -0.9
VRK1-206ENST00000557222 RUBCNLQ9H714 662 aa9.46□□□□□ -0.9
VRK1-206ENST00000557222 BRD9Q9H8M2 597 aa9.46□□□□□ -0.9
VRK1-206ENST00000557222 PLEKHA5Q9HAU0 1116 aa9.46□□□□□ -0.9
VRK1-206ENST00000557222 DDX19AQ9NUU7 478 aaKnown RBP9.46□□□□□ -0.9
VRK1-206ENST00000557222 NCDNQ9UBB6 729 aa9.46□□□□□ -0.9
VRK1-206ENST00000557222 FBXL5Q9UKA1 691 aa9.46□□□□□ -0.9
VRK1-206ENST00000557222 USP20Q9Y2K6 914 aa9.46□□□□□ -0.9
VRK1-206ENST00000557222 NUB1Q9Y5A7 615 aa9.46□□□□□ -0.9
VRK1-206ENST00000557222 INSL5Q9Y5Q6 135 aa9.46□□□□□ -0.9
VRK1-206ENST00000557222 PATJQ8NI35 1801 aa9.45□□□□□ -0.9
VRK1-206ENST00000557222 SHISA7A6NL88 538 aa9.45□□□□□ -0.9
VRK1-206ENST00000557222 CCDC169A6NNP5 214 aa9.45□□□□□ -0.9
VRK1-206ENST00000557222 ABLIM1O14639 778 aa9.45□□□□□ -0.9
VRK1-206ENST00000557222 TOM1L1O75674 476 aa9.45□□□□□ -0.9
VRK1-206ENST00000557222 OAZ2O95190 189 aa9.45□□□□□ -0.9
VRK1-206ENST00000557222 CEBPBP17676 345 aa9.45□□□□□ -0.9
VRK1-206ENST00000557222 PSMC3P17980 439 aa9.45□□□□□ -0.9
VRK1-206ENST00000557222 CD72P21854 359 aa9.45□□□□□ -0.9
VRK1-206ENST00000557222 FCARP24071 287 aa9.45□□□□□ -0.9
VRK1-206ENST00000557222 IGFBP6P24592 240 aaPredicted RBP9.45□□□□□ -0.9
VRK1-206ENST00000557222 GUCY2CP25092 1073 aa9.45□□□□□ -0.9
VRK1-206ENST00000557222 U2AF2P26368 475 aaKnown RBP eCLIP9.45□□□□□ -0.9
VRK1-206ENST00000557222 PRPHP41219 470 aa9.45□□□□□ -0.9
VRK1-206ENST00000557222 PLA2G4AP47712 749 aa9.45□□□□□ -0.9
VRK1-206ENST00000557222 GUCY1B3Q02153 619 aa9.45□□□□□ -0.9
VRK1-206ENST00000557222 ST3GAL1Q11201 340 aa9.45□□□□□ -0.9
VRK1-206ENST00000557222 KYAT1Q16773 422 aa9.45□□□□□ -0.9
VRK1-206ENST00000557222 RSPO4Q2I0M5 234 aaPredicted RBP9.45□□□□□ -0.9
VRK1-206ENST00000557222 FAM78AQ5JUQ0 283 aa9.45□□□□□ -0.9
VRK1-206ENST00000557222 KRT79Q5XKE5 535 aa9.45□□□□□ -0.9
VRK1-206ENST00000557222 ZNF280DQ6N043 979 aa9.45□□□□□ -0.9
VRK1-206ENST00000557222 ZPBP2Q6X784 338 aa9.45□□□□□ -0.9
VRK1-206ENST00000557222 C1orf186Q6ZWK4 172 aa9.45□□□□□ -0.9
VRK1-206ENST00000557222 MFSD6LQ8IWD5 586 aa9.45□□□□□ -0.9
VRK1-206ENST00000557222 DAW1Q8N136 415 aa9.45□□□□□ -0.9
VRK1-206ENST00000557222 CELF5Q8N6W0 485 aaKnown RBP9.45□□□□□ -0.9
VRK1-206ENST00000557222 ST13P5Q8NFI4 369 aaPredicted RBP9.45□□□□□ -0.9
VRK1-206ENST00000557222 BEST2Q8NFU1 509 aa9.45□□□□□ -0.9
VRK1-206ENST00000557222 ZSCAN31Q96LW9 406 aaPredicted RBP9.45□□□□□ -0.9
VRK1-206ENST00000557222 ZMAT2Q96NC0 199 aaKnown RBP9.45□□□□□ -0.9
VRK1-206ENST00000557222 CORO1BQ9BR76 489 aa9.45□□□□□ -0.9
VRK1-206ENST00000557222 TCHPQ9BT92 498 aa9.45□□□□□ -0.9
VRK1-206ENST00000557222 TARS2Q9BW92 718 aaKnown RBP9.45□□□□□ -0.9
VRK1-206ENST00000557222 CYP4F11Q9HBI6 524 aa9.45□□□□□ -0.9
VRK1-206ENST00000557222 GOLGA2P5Q9HBQ8 144 aa9.45□□□□□ -0.9
VRK1-206ENST00000557222 ZNF334Q9HCZ1 680 aaPredicted RBP9.45□□□□□ -0.9
VRK1-206ENST00000557222 KMT5AQ9NQR1 393 aa9.45□□□□□ -0.9
VRK1-206ENST00000557222 HEBP1Q9NRV9 189 aa9.45□□□□□ -0.9
VRK1-206ENST00000557222 KCND2Q9NZV8 630 aa9.45□□□□□ -0.9
VRK1-206ENST00000557222 SMG5Q9UPR3 1016 aaKnown RBP9.45□□□□□ -0.9
VRK1-206ENST00000557222 CITO14578 2027 aa9.44□□□□□ -0.9
VRK1-206ENST00000557222 MED19A0JLT2 244 aaPredicted RBP9.44□□□□□ -0.9
VRK1-206ENST00000557222 A6NJY4 79 aa9.44□□□□□ -0.9
VRK1-206ENST00000557222 H0YCG3 227 aa9.44□□□□□ -0.9
VRK1-206ENST00000557222 I3L4J1 428 aa9.44□□□□□ -0.9
VRK1-206ENST00000557222 M0QZQ0 153 aa9.44□□□□□ -0.9
VRK1-206ENST00000557222 FOXD2O60548 495 aaPredicted RBP9.44□□□□□ -0.9
VRK1-206ENST00000557222 LRP3O75074 770 aa9.44□□□□□ -0.9
VRK1-206ENST00000557222 HIP1RO75146 1068 aa9.44□□□□□ -0.9
VRK1-206ENST00000557222 PAPSS2O95340 614 aaPredicted RBP9.44□□□□□ -0.9
VRK1-206ENST00000557222 SEC24AO95486 1093 aa9.44□□□□□ -0.9
VRK1-206ENST00000557222 CELA2BP08218 269 aaPredicted RBP9.44□□□□□ -0.9
VRK1-206ENST00000557222 TDGF1P13385 188 aa9.44□□□□□ -0.9
VRK1-206ENST00000557222 CYP3A5P20815 502 aa9.44□□□□□ -0.9
VRK1-206ENST00000557222 MARCKSP29966 332 aaPredicted RBP9.44□□□□□ -0.9
VRK1-206ENST00000557222 LRPAP1P30533 357 aa9.44□□□□□ -0.9
VRK1-206ENST00000557222 CNR2P34972 360 aa9.44□□□□□ -0.9
VRK1-206ENST00000557222 CCR3P51677 355 aa9.44□□□□□ -0.9
VRK1-206ENST00000557222 STRN3Q13033 797 aa9.44□□□□□ -0.9
VRK1-206ENST00000557222 MTAPQ13126 283 aa9.44□□□□□ -0.9
VRK1-206ENST00000557222 PLD1Q13393 1074 aa9.44□□□□□ -0.9
VRK1-206ENST00000557222 GNL2Q13823 731 aaKnown RBP9.44□□□□□ -0.9
VRK1-206ENST00000557222 UBAP2LQ14157 1087 aaKnown RBP9.44□□□□□ -0.9
VRK1-206ENST00000557222 LBRQ14739 615 aaKnown RBP9.44□□□□□ -0.9
VRK1-206ENST00000557222 CTXN3Q4LDR2 81 aa9.44□□□□□ -0.9
VRK1-206ENST00000557222 RINT1Q6NUQ1 792 aa9.44□□□□□ -0.9
VRK1-206ENST00000557222 PGBD3Q8N328 593 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms