RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 UNGP13051 313 aaPredicted RBP16.17■□□□□ 0.18
TMEM55B-207ENST00000557041 PDGFRAP16234 1089 aa16.17■□□□□ 0.18
TMEM55B-207ENST00000557041 BRSK2Q8IWQ3 736 aa16.17■□□□□ 0.18
TMEM55B-207ENST00000557041 CCDC63Q8NA47 563 aa16.17■□□□□ 0.18
TMEM55B-207ENST00000557041 ACTL9Q8TC94 416 aa16.17■□□□□ 0.18
TMEM55B-207ENST00000557041 VPS33BQ9H267 617 aa16.17■□□□□ 0.18
TMEM55B-207ENST00000557041 PGAP2Q9UHJ9 254 aa16.17■□□□□ 0.18
TMEM55B-207ENST00000557041 NFS1Q9Y697 457 aa16.17■□□□□ 0.18
TMEM55B-207ENST00000557041 ADORA2BP29275 332 aa16.17■□□□□ 0.18
TMEM55B-207ENST00000557041 PHKA2P46019 1235 aa16.17■□□□□ 0.18
TMEM55B-207ENST00000557041 ZBTB16Q05516 673 aa16.17■□□□□ 0.18
TMEM55B-207ENST00000557041 IFRD2Q12894 506 aaPredicted RBP16.17■□□□□ 0.18
TMEM55B-207ENST00000557041 GPR162Q16538 588 aa16.17■□□□□ 0.18
TMEM55B-207ENST00000557041 C12orf29Q8N999 325 aa16.17■□□□□ 0.18
TMEM55B-207ENST00000557041 JOSD2Q8TAC2 188 aa16.17■□□□□ 0.18
TMEM55B-207ENST00000557041 TGS1Q96RS0 853 aaKnown RBP16.17■□□□□ 0.18
TMEM55B-207ENST00000557041 SMARCAD1Q9H4L7 1026 aa16.17■□□□□ 0.18
TMEM55B-207ENST00000557041 MINDY3Q9H8M7 445 aa16.17■□□□□ 0.18
TMEM55B-207ENST00000557041 SEPT10Q9P0V9 454 aa16.17■□□□□ 0.18
TMEM55B-207ENST00000557041 MAFBQ9Y5Q3 323 aaPredicted RBP16.17■□□□□ 0.18
TMEM55B-207ENST00000557041 TRAPPC3O43617 180 aa16.16■□□□□ 0.18
TMEM55B-207ENST00000557041 PRPSAP2O60256 369 aa16.16■□□□□ 0.18
TMEM55B-207ENST00000557041 AGTP01019 485 aa16.16■□□□□ 0.18
TMEM55B-207ENST00000557041 ADCYAP1R1P41586 468 aa16.16■□□□□ 0.18
TMEM55B-207ENST00000557041 OTUD4Q01804 1114 aaKnown RBP16.16■□□□□ 0.18
TMEM55B-207ENST00000557041 AUHQ13825 339 aaKnown RBP16.16■□□□□ 0.18
TMEM55B-207ENST00000557041 KIF2BQ8N4N8 673 aa16.16■□□□□ 0.18
TMEM55B-207ENST00000557041 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.16■□□□□ 0.181e-8■■■■■ 51.1
TMEM55B-207ENST00000557041 CFAP36Q96G28 342 aa16.16■□□□□ 0.18
TMEM55B-207ENST00000557041 JPH2Q9BR39 696 aaPredicted RBP16.16■□□□□ 0.18
TMEM55B-207ENST00000557041 HESX1Q9UBX0 185 aa16.16■□□□□ 0.18
TMEM55B-207ENST00000557041 TTLL3Q9Y4R7 772 aa16.16■□□□□ 0.18
TMEM55B-207ENST00000557041 KAT6AQ92794 2004 aa16.16■□□□□ 0.18
TMEM55B-207ENST00000557041 LACTBL1A8MY62 500 aa16.16■□□□□ 0.18
TMEM55B-207ENST00000557041 MCF2LO15068 1137 aa16.16■□□□□ 0.18
TMEM55B-207ENST00000557041 ZC3H11AO75152 810 aaKnown RBP eCLIP16.16■□□□□ 0.18
TMEM55B-207ENST00000557041 RPS6KA5O75582 802 aa16.16■□□□□ 0.18
TMEM55B-207ENST00000557041 TTC4O95801 387 aa16.16■□□□□ 0.18
TMEM55B-207ENST00000557041 YWHAEP62258 255 aaKnown RBP16.16■□□□□ 0.18
TMEM55B-207ENST00000557041 FASTKD3Q14CZ7 662 aaKnown RBP16.16■□□□□ 0.18
TMEM55B-207ENST00000557041 MPZL3Q6UWV2 235 aa16.16■□□□□ 0.18
TMEM55B-207ENST00000557041 ZNF677Q86XU0 584 aa16.16■□□□□ 0.18
TMEM55B-207ENST00000557041 ANKRD13AQ8IZ07 590 aa16.16■□□□□ 0.18
TMEM55B-207ENST00000557041 HPDLQ96IR7 371 aa16.16■□□□□ 0.18
TMEM55B-207ENST00000557041 FBXL18Q96ME1 805 aa16.16■□□□□ 0.18
TMEM55B-207ENST00000557041 SMC6Q96SB8 1091 aa16.16■□□□□ 0.18
TMEM55B-207ENST00000557041 KIF9Q9HAQ2 790 aa16.16■□□□□ 0.18
TMEM55B-207ENST00000557041 FZD9O00144 591 aa16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 MAPK13O15264 365 aa16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 DYNC1LI2O43237 492 aaPredicted RBP16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 P4HA1P13674 534 aa16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 PECAM1P16284 738 aaPredicted RBP16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 POU5F1Q01860 360 aaKnown RBP16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 ACOT1Q86TX2 421 aa16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 PCYT2Q99447 389 aa16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 ACO2Q99798 780 aaKnown RBP16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 FSCN2O14926 492 aa16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 ARL2P36404 184 aa16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 CENPCQ03188 943 aa16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 DNAJC3Q13217 504 aa16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 MAP1SQ66K74 1059 aaPredicted RBP16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 JADE1Q6IE81 842 aa16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 PAXIP1Q6ZW49 1069 aaPredicted RBP16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 TEX2Q8IWB9 1127 aa16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 GPC2Q8N158 579 aa16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 PITPNM3Q9BZ71 974 aa16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 NINJ2Q9NZG7 142 aa16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 DCTN4Q9UJW0 460 aa16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 CHMP2BQ9UQN3 213 aa16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 NAALADL1Q9UQQ1 740 aa16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 MRPL42Q9Y6G3 142 aaKnown RBP16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 MED7O43513 233 aa16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 RBP3P10745 1247 aa16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 SSTR1P30872 391 aa16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 EIF3EP60228 445 aaKnown RBP16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 LMNB2Q03252 620 aa16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 C15orf59Q2T9L4 293 aaPredicted RBP16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 ZNF449Q6P9G9 518 aa16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 EXOC3L1Q86VI1 746 aa16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 ERO1BQ86YB8 467 aa16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 RCOR2Q8IZ40 523 aa16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 SPATA18Q8TC71 538 aa16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 CDCA5Q96FF9 252 aa16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 DDX27Q96GQ7 796 aaKnown RBP16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 CFAP57Q96MR6 1250 aa16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 C2orf40Q9H1Z8 148 aa16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 ERAP1Q9NZ08 941 aa16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 COL4A5P29400 1685 aa16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 NFASCO94856 1347 aa16.15■□□□□ 0.18
TMEM55B-207ENST00000557041 MMRN1Q13201 1228 aa16.14■□□□□ 0.17
TMEM55B-207ENST00000557041 TAF5Q15542 800 aa16.14■□□□□ 0.17
TMEM55B-207ENST00000557041 FAM47CQ5HY64 1035 aa16.14■□□□□ 0.17
TMEM55B-207ENST00000557041 C9orf131Q5VYM1 1079 aa16.14■□□□□ 0.17
TMEM55B-207ENST00000557041 SPOCD1Q6ZMY3 1216 aa16.14■□□□□ 0.17
TMEM55B-207ENST00000557041 CENPUQ71F23 418 aa16.14■□□□□ 0.17
TMEM55B-207ENST00000557041 TRMT10CQ7L0Y3 403 aaKnown RBP16.14■□□□□ 0.17
TMEM55B-207ENST00000557041 MON1BQ7L1V2 547 aa16.14■□□□□ 0.17
TMEM55B-207ENST00000557041 CROCCP2Q86T23 111 aa16.14■□□□□ 0.17
TMEM55B-207ENST00000557041 WDR49Q8IV35 697 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms