RNA–Protein interactions for RNA: ENST00000556864.5

PSEN1-218, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-218ENST00000556864 SLC22A17Q8WUG5 538 aa18.71■□□□□ 0.59
PSEN1-218ENST00000556864 PPM1EQ8WY54 764 aa18.71■□□□□ 0.59
PSEN1-218ENST00000556864 TNIP3Q96KP6 325 aa18.71■□□□□ 0.59
PSEN1-218ENST00000556864 RTP3Q9BQQ7 232 aa18.71■□□□□ 0.59
PSEN1-218ENST00000556864 CRACR2AQ9BSW2 395 aa18.71■□□□□ 0.59
PSEN1-218ENST00000556864 SDCBP2Q9H190 292 aa18.71■□□□□ 0.59
PSEN1-218ENST00000556864 PLEKHA4Q9H4M7 779 aa18.71■□□□□ 0.59
PSEN1-218ENST00000556864 CLDND1Q9NY35 253 aa18.71■□□□□ 0.59
PSEN1-218ENST00000556864 AFF4Q9UHB7 1163 aaKnown RBP18.71■□□□□ 0.59
PSEN1-218ENST00000556864 TGM5O43548 720 aa18.7■□□□□ 0.58
PSEN1-218ENST00000556864 CD58P19256 250 aa18.7■□□□□ 0.58
PSEN1-218ENST00000556864 RFX1P22670 979 aa18.7■□□□□ 0.58
PSEN1-218ENST00000556864 ACAT1P24752 427 aaKnown RBP18.7■□□□□ 0.58
PSEN1-218ENST00000556864 ELF1P32519 619 aa18.7■□□□□ 0.58
PSEN1-218ENST00000556864 GPR17Q13304 367 aa18.7■□□□□ 0.58
PSEN1-218ENST00000556864 CCDC149Q6ZUS6 474 aa18.7■□□□□ 0.58
PSEN1-218ENST00000556864 ZNF461Q8TAF7 563 aa18.7■□□□□ 0.58
PSEN1-218ENST00000556864 LMO3Q8TAP4 145 aa18.7■□□□□ 0.58
PSEN1-218ENST00000556864 ELMO3Q96BJ8 720 aa18.7■□□□□ 0.58
PSEN1-218ENST00000556864 MAN1C1Q9NR34 630 aa18.7■□□□□ 0.58
PSEN1-218ENST00000556864 APEX2Q9UBZ4 518 aa18.7■□□□□ 0.58
PSEN1-218ENST00000556864 BARX2Q9UMQ3 279 aaPredicted RBP18.7■□□□□ 0.58
PSEN1-218ENST00000556864 ATP8B3O60423 1300 aa18.7■□□□□ 0.58
PSEN1-218ENST00000556864 WDR27A2RRH5 827 aa18.69■□□□□ 0.58
PSEN1-218ENST00000556864 LRRN2O75325 713 aa18.69■□□□□ 0.58
PSEN1-218ENST00000556864 WEE2P0C1S8 567 aa18.69■□□□□ 0.58
PSEN1-218ENST00000556864 OR4Q2P0C623 313 aa18.69■□□□□ 0.58
PSEN1-218ENST00000556864 EPCAMP16422 314 aa18.69■□□□□ 0.58
PSEN1-218ENST00000556864 GTF2F1P35269 517 aaKnown RBP eCLIP18.69■□□□□ 0.58
PSEN1-218ENST00000556864 CDH8P55286 799 aa18.69■□□□□ 0.58
PSEN1-218ENST00000556864 SLC39A12Q504Y0 691 aa18.69■□□□□ 0.58
PSEN1-218ENST00000556864 TMEM184AQ6ZMB5 413 aa18.69■□□□□ 0.58
PSEN1-218ENST00000556864 C4orf50Q6ZRC1 276 aa18.69■□□□□ 0.58
PSEN1-218ENST00000556864 EP400NLQ6ZTU2 488 aa18.69■□□□□ 0.58
PSEN1-218ENST00000556864 RTL10Q7L3V2 364 aa18.69■□□□□ 0.58
PSEN1-218ENST00000556864 KREMEN2Q8NCW0 462 aa18.69■□□□□ 0.58
PSEN1-218ENST00000556864 SPPL2BQ8TCT7 592 aa18.69■□□□□ 0.58
PSEN1-218ENST00000556864 TATDN2Q93075 761 aa18.69■□□□□ 0.58
PSEN1-218ENST00000556864 JAKMIP2Q96AA8 810 aa18.69■□□□□ 0.58
PSEN1-218ENST00000556864 SFXN1Q9H9B4 322 aa18.69■□□□□ 0.58
PSEN1-218ENST00000556864 COG5Q9UP83 839 aa18.69■□□□□ 0.58
PSEN1-218ENST00000556864 DAAM1Q9Y4D1 1078 aa18.69■□□□□ 0.58
PSEN1-218ENST00000556864 LRRC10BA6NIK2 292 aa18.68■□□□□ 0.58
PSEN1-218ENST00000556864 PRRG1O14668 218 aa18.68■□□□□ 0.58
PSEN1-218ENST00000556864 CILPO75339 1184 aa18.68■□□□□ 0.58
PSEN1-218ENST00000556864 ABLIM3O94929 683 aa18.68■□□□□ 0.58
PSEN1-218ENST00000556864 GLP2RO95838 553 aa18.68■□□□□ 0.58
PSEN1-218ENST00000556864 ATF2P15336 505 aa18.68■□□□□ 0.58
PSEN1-218ENST00000556864 HOXB8P17481 243 aaPredicted RBP18.68■□□□□ 0.58
PSEN1-218ENST00000556864 PON1P27169 355 aa18.68■□□□□ 0.58
PSEN1-218ENST00000556864 NDST1P52848 882 aa18.68■□□□□ 0.58
PSEN1-218ENST00000556864 MFAP3P55082 362 aa18.68■□□□□ 0.58
PSEN1-218ENST00000556864 PSMC1P62191 440 aaKnown RBP18.68■□□□□ 0.58
PSEN1-218ENST00000556864 UBXN1Q04323 297 aa18.68■□□□□ 0.58
PSEN1-218ENST00000556864 ADAM15Q13444 863 aa18.68■□□□□ 0.58
PSEN1-218ENST00000556864 KCNC3Q14003 757 aa18.68■□□□□ 0.58
PSEN1-218ENST00000556864 CTC1Q2NKJ3 1217 aa18.68■□□□□ 0.58
PSEN1-218ENST00000556864 SMYD5Q6GMV2 418 aa18.68■□□□□ 0.58
PSEN1-218ENST00000556864 LILRA6Q6PI73 481 aa18.68■□□□□ 0.58
PSEN1-218ENST00000556864 ARHGEF19Q8IW93 802 aa18.68■□□□□ 0.58
PSEN1-218ENST00000556864 RNF214Q8ND24 703 aa18.68■□□□□ 0.58
PSEN1-218ENST00000556864 TMEM209Q96SK2 561 aa18.68■□□□□ 0.58
PSEN1-218ENST00000556864 ARID3AQ99856 593 aa18.68■□□□□ 0.58
PSEN1-218ENST00000556864 LSM14BQ9BX40 385 aaKnown RBP18.68■□□□□ 0.58
PSEN1-218ENST00000556864 NT5C1AQ9BXI3 368 aa18.68■□□□□ 0.58
PSEN1-218ENST00000556864 UBE2ZQ9H832 354 aaPredicted RBP18.68■□□□□ 0.58
PSEN1-218ENST00000556864 CISHQ9NSE2 258 aa18.68■□□□□ 0.58
PSEN1-218ENST00000556864 ZDHHC7Q9NXF8 308 aa18.68■□□□□ 0.58
PSEN1-218ENST00000556864 HSFX1Q9UBD0 423 aa18.68■□□□□ 0.58
PSEN1-218ENST00000556864 PCDHB5Q9Y5E4 795 aa18.68■□□□□ 0.58
PSEN1-218ENST00000556864 PLXNA3P51805 1871 aa18.67■□□□□ 0.58
PSEN1-218ENST00000556864 MTMR11A4FU01 709 aa18.67■□□□□ 0.58
PSEN1-218ENST00000556864 LINC01565O15544 149 aa18.67■□□□□ 0.58
PSEN1-218ENST00000556864 TPM3P06753 285 aa18.67■□□□□ 0.58
PSEN1-218ENST00000556864 PDGFRBP09619 1106 aa18.67■□□□□ 0.58
PSEN1-218ENST00000556864 SLC9A1P19634 815 aa18.67■□□□□ 0.58
PSEN1-218ENST00000556864 ADCY1Q08828 1119 aa18.67■□□□□ 0.58
PSEN1-218ENST00000556864 PLD1Q13393 1074 aa18.67■□□□□ 0.58
PSEN1-218ENST00000556864 ANKRD54Q6NXT1 300 aa18.67■□□□□ 0.58
PSEN1-218ENST00000556864 RNF19BQ6ZMZ0 732 aa18.67■□□□□ 0.58
PSEN1-218ENST00000556864 APTXQ7Z2E3 356 aaKnown RBP18.67■□□□□ 0.58
PSEN1-218ENST00000556864 SPATA2LQ8IUW3 424 aaPredicted RBP18.67■□□□□ 0.58
PSEN1-218ENST00000556864 B3GALNT2Q8NCR0 500 aa18.67■□□□□ 0.58
PSEN1-218ENST00000556864 VN1R2Q8NFZ6 395 aa18.67■□□□□ 0.58
PSEN1-218ENST00000556864 HLA-CQ95604 372 aa18.67■□□□□ 0.58
PSEN1-218ENST00000556864 FUBP3Q96I24 572 aaKnown RBP eCLIP18.67■□□□□ 0.58
PSEN1-218ENST00000556864 PCMTD1Q96MG8 357 aaPredicted RBP18.67■□□□□ 0.58
PSEN1-218ENST00000556864 PGLYRP2Q96PD5 576 aa18.67■□□□□ 0.58
PSEN1-218ENST00000556864 ABCB6Q9NP58 842 aa18.67■□□□□ 0.58
PSEN1-218ENST00000556864 PLCB1Q9NQ66 1216 aa18.67■□□□□ 0.58
PSEN1-218ENST00000556864 A0A1B0GTH6 734 aa18.66■□□□□ 0.58
PSEN1-218ENST00000556864 TBX10O75333 385 aa18.66■□□□□ 0.58
PSEN1-218ENST00000556864 C8AP07357 584 aa18.66■□□□□ 0.58
PSEN1-218ENST00000556864 HNRNPA1P09651 372 aaKnown RBP eCLIP18.66■□□□□ 0.58
PSEN1-218ENST00000556864 PTPN1P18031 435 aaKnown RBP18.66■□□□□ 0.58
PSEN1-218ENST00000556864 LMO2P25791 158 aa18.66■□□□□ 0.58
PSEN1-218ENST00000556864 HOXA9P31269 272 aa18.66■□□□□ 0.58
PSEN1-218ENST00000556864 FANCCQ00597 558 aa18.66■□□□□ 0.58
PSEN1-218ENST00000556864 MDH1BQ5I0G3 518 aa18.66■□□□□ 0.58
PSEN1-218ENST00000556864 PPM1LQ5SGD2 360 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms