RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 CCDC47Q96A33 483 aaKnown RBP24.34■■□□□ 1.49
PABPN1-207ENST00000556821 FNBP1Q96RU3 617 aa24.34■■□□□ 1.49
PABPN1-207ENST00000556821 CORO1BQ9BR76 489 aa24.34■■□□□ 1.49
PABPN1-207ENST00000556821 DNAJC25Q9H1X3 360 aa24.34■■□□□ 1.49
PABPN1-207ENST00000556821 MAPK8IP1Q9UQF2 711 aa24.34■■□□□ 1.49
PABPN1-207ENST00000556821 TRAF3IP3Q9Y228 551 aa24.34■■□□□ 1.49
PABPN1-207ENST00000556821 SNX9Q9Y5X1 595 aa24.34■■□□□ 1.49
PABPN1-207ENST00000556821 VPS13AQ96RL7 3174 aa24.34■■□□□ 1.49
PABPN1-207ENST00000556821 KIF26AQ9ULI4 1882 aaPredicted RBP24.33■■□□□ 1.49
PABPN1-207ENST00000556821 CCR2P41597 374 aa24.33■■□□□ 1.49
PABPN1-207ENST00000556821 CDR1P51861 262 aa24.33■■□□□ 1.49
PABPN1-207ENST00000556821 SLC39A12Q504Y0 691 aa24.33■■□□□ 1.49
PABPN1-207ENST00000556821 OSTM1Q86WC4 334 aa24.33■■□□□ 1.49
PABPN1-207ENST00000556821 HS6ST3Q8IZP7 471 aa24.33■■□□□ 1.49
PABPN1-207ENST00000556821 THEM5Q8N1Q8 247 aa24.33■■□□□ 1.49
PABPN1-207ENST00000556821 HPDLQ96IR7 371 aa24.33■■□□□ 1.49
PABPN1-207ENST00000556821 DUSP12Q9UNI6 340 aa24.33■■□□□ 1.49
PABPN1-207ENST00000556821 SLC27A5Q9Y2P5 690 aa24.33■■□□□ 1.49
PABPN1-207ENST00000556821 MRPS23Q9Y3D9 190 aaKnown RBP24.33■■□□□ 1.49
PABPN1-207ENST00000556821 PI15O43692 258 aa24.32■■□□□ 1.48
PABPN1-207ENST00000556821 NARSO43776 548 aaKnown RBP24.32■■□□□ 1.48
PABPN1-207ENST00000556821 HUS1O60921 280 aa24.32■■□□□ 1.48
PABPN1-207ENST00000556821 PRPF40AO75400 957 aaKnown RBP24.32■■□□□ 1.48
PABPN1-207ENST00000556821 CEBPBP17676 345 aa24.32■■□□□ 1.48
PABPN1-207ENST00000556821 EPHA5P54756 1037 aa24.32■■□□□ 1.48
PABPN1-207ENST00000556821 SOWAHAQ2M3V2 549 aa24.32■■□□□ 1.48
PABPN1-207ENST00000556821 LIMS2Q7Z4I7 341 aa24.32■■□□□ 1.48
PABPN1-207ENST00000556821 GUF1Q8N442 669 aaKnown RBP24.32■■□□□ 1.48
PABPN1-207ENST00000556821 TOP6BLQ8N6T0 577 aa24.32■■□□□ 1.48
PABPN1-207ENST00000556821 FGF14Q92915 247 aa24.32■■□□□ 1.48
PABPN1-207ENST00000556821 TCEAL4Q96EI5 215 aa24.32■■□□□ 1.48
PABPN1-207ENST00000556821 TMLHEQ9NVH6 421 aa24.32■■□□□ 1.48
PABPN1-207ENST00000556821 HSFX1Q9UBD0 423 aa24.32■■□□□ 1.48
PABPN1-207ENST00000556821 NUMBLQ9Y6R0 609 aa24.32■■□□□ 1.48
PABPN1-207ENST00000556821 HELZP42694 1942 aaKnown RBP24.31■■□□□ 1.48
PABPN1-207ENST00000556821 COL4A3Q01955 1670 aa24.31■■□□□ 1.48
PABPN1-207ENST00000556821 HCRTO43612 131 aa24.31■■□□□ 1.48
PABPN1-207ENST00000556821 SOAT2O75908 522 aa24.31■■□□□ 1.48
PABPN1-207ENST00000556821 CST3P01034 146 aaPredicted RBP24.31■■□□□ 1.48
PABPN1-207ENST00000556821 CLDN10P78369 228 aa24.31■■□□□ 1.48
PABPN1-207ENST00000556821 MYO1EQ12965 1108 aa24.31■■□□□ 1.48
PABPN1-207ENST00000556821 PARM1Q6UWI2 310 aa24.31■■□□□ 1.48
PABPN1-207ENST00000556821 CCDC105Q8IYK2 499 aa24.31■■□□□ 1.48
PABPN1-207ENST00000556821 SMYD4Q8IYR2 804 aaPredicted RBP24.31■■□□□ 1.48
PABPN1-207ENST00000556821 TMEM86AQ8N2M4 240 aa24.31■■□□□ 1.48
PABPN1-207ENST00000556821 SLC44A3Q8N4M1 653 aa24.31■■□□□ 1.48
PABPN1-207ENST00000556821 PARD3BQ8TEW8 1205 aa24.31■■□□□ 1.48
PABPN1-207ENST00000556821 NXPE3Q969Y0 559 aa24.31■■□□□ 1.48
PABPN1-207ENST00000556821 RPP25Q9BUL9 199 aaKnown RBP24.31■■□□□ 1.48
PABPN1-207ENST00000556821 LRRC3Q9BY71 257 aa24.31■■□□□ 1.48
PABPN1-207ENST00000556821 LRRIQ3A6PVS8 624 aaPredicted RBP24.3■■□□□ 1.48
PABPN1-207ENST00000556821 GABRDO14764 452 aa24.3■■□□□ 1.48
PABPN1-207ENST00000556821 MOSPD3O75425 235 aa24.3■■□□□ 1.48
PABPN1-207ENST00000556821 KRT37O76014 449 aa24.3■■□□□ 1.48
PABPN1-207ENST00000556821 AOC1P19801 751 aa24.3■■□□□ 1.48
PABPN1-207ENST00000556821 ZCWPW2Q504Y3 356 aa24.3■■□□□ 1.48
PABPN1-207ENST00000556821 DGLUCYQ7Z3D6 616 aa24.3■■□□□ 1.48
PABPN1-207ENST00000556821 TMC8Q8IU68 726 aa24.3■■□□□ 1.48
PABPN1-207ENST00000556821 ADGRF2Q8IZF7 708 aa24.3■■□□□ 1.48
PABPN1-207ENST00000556821 ELMOD1Q8N336 334 aa24.3■■□□□ 1.48
PABPN1-207ENST00000556821 SPATA18Q8TC71 538 aa24.3■■□□□ 1.48
PABPN1-207ENST00000556821 KBTBD7Q8WVZ9 684 aa24.3■■□□□ 1.48
PABPN1-207ENST00000556821 ERCC4Q92889 916 aaPredicted RBP24.3■■□□□ 1.48
PABPN1-207ENST00000556821 CCDC34Q96HJ3 373 aa24.3■■□□□ 1.48
PABPN1-207ENST00000556821 ZNF512Q96ME7 567 aaPredicted RBP24.3■■□□□ 1.48
PABPN1-207ENST00000556821 TIGD1Q96MW7 591 aa24.3■■□□□ 1.48
PABPN1-207ENST00000556821 PKMYT1Q99640 499 aa24.3■■□□□ 1.48
PABPN1-207ENST00000556821 DDX43Q9NXZ2 648 aaKnown RBP24.3■■□□□ 1.48
PABPN1-207ENST00000556821 EP300Q09472 2414 aaPredicted RBP24.3■■□□□ 1.48
PABPN1-207ENST00000556821 KIF20AO95235 890 aa24.29■■□□□ 1.48
PABPN1-207ENST00000556821 ATF6P18850 670 aa24.29■■□□□ 1.48
PABPN1-207ENST00000556821 ACAT1P24752 427 aaKnown RBP24.29■■□□□ 1.48
PABPN1-207ENST00000556821 DLG4P78352 724 aa24.29■■□□□ 1.48
PABPN1-207ENST00000556821 PLD1Q13393 1074 aa24.29■■□□□ 1.48
PABPN1-207ENST00000556821 NFIL3Q16649 462 aa24.29■■□□□ 1.48
PABPN1-207ENST00000556821 CCDC142Q17RM4 750 aa24.29■■□□□ 1.48
PABPN1-207ENST00000556821 IQCEQ6IPM2 695 aa24.29■■□□□ 1.48
PABPN1-207ENST00000556821 PDZD4Q76G19 769 aaPredicted RBP24.29■■□□□ 1.48
PABPN1-207ENST00000556821 SPATA20Q8TB22 786 aa24.29■■□□□ 1.48
PABPN1-207ENST00000556821 SEMA4AQ9H3S1 761 aa24.29■■□□□ 1.48
PABPN1-207ENST00000556821 PATJQ8NI35 1801 aa24.28■■□□□ 1.48
PABPN1-207ENST00000556821 CALUO43852 315 aaPredicted RBP24.28■■□□□ 1.48
PABPN1-207ENST00000556821 GADD45BO75293 160 aaPredicted RBP24.28■■□□□ 1.48
PABPN1-207ENST00000556821 ANGPT1Q15389 498 aa24.28■■□□□ 1.48
PABPN1-207ENST00000556821 INTS6LQ5JSJ4 861 aaKnown RBP24.28■■□□□ 1.48
PABPN1-207ENST00000556821 TDRD10Q5VZ19 366 aaKnown RBP24.28■■□□□ 1.48
PABPN1-207ENST00000556821 CEP135Q66GS9 1140 aa24.28■■□□□ 1.48
PABPN1-207ENST00000556821 DPH6Q7L8W6 267 aa24.28■■□□□ 1.48
PABPN1-207ENST00000556821 SPPL2BQ8TCT7 592 aa24.28■■□□□ 1.48
PABPN1-207ENST00000556821 C2orf15Q8WU43 125 aaKnown RBP24.28■■□□□ 1.48
PABPN1-207ENST00000556821 MCRS1Q96EZ8 462 aa24.28■■□□□ 1.48
PABPN1-207ENST00000556821 ACBD6Q9BR61 282 aa24.28■■□□□ 1.48
PABPN1-207ENST00000556821 XYLT2Q9H1B5 865 aa24.28■■□□□ 1.48
PABPN1-207ENST00000556821 MFSD1Q9H3U5 465 aa24.28■■□□□ 1.48
PABPN1-207ENST00000556821 ASAH2Q9NR71 780 aa24.28■■□□□ 1.48
PABPN1-207ENST00000556821 ABI2Q9NYB9 513 aaPredicted RBP24.28■■□□□ 1.48
PABPN1-207ENST00000556821 R3HCC1Q9Y3T6 440 aaKnown RBP24.28■■□□□ 1.48
PABPN1-207ENST00000556821 NME7Q9Y5B8 376 aa24.28■■□□□ 1.48
PABPN1-207ENST00000556821 PCDHA5Q9Y5H7 936 aa24.28■■□□□ 1.48
PABPN1-207ENST00000556821 MICAL2O94851 1124 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms