RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 GPC5P78333 572 aa11.1□□□□□ -0.63
SHMT2-224ENST00000556737 RBP5P82980 135 aa11.1□□□□□ -0.63
SHMT2-224ENST00000556737 PSMD2Q13200 908 aa11.1□□□□□ -0.63
SHMT2-224ENST00000556737 SOWAHAQ2M3V2 549 aa11.1□□□□□ -0.63
SHMT2-224ENST00000556737 INTS6LQ5JSJ4 861 aaKnown RBP11.1□□□□□ -0.63
SHMT2-224ENST00000556737 FAM78AQ5JUQ0 283 aa11.1□□□□□ -0.63
SHMT2-224ENST00000556737 IQCEQ6IPM2 695 aa11.1□□□□□ -0.63
SHMT2-224ENST00000556737 KRBA2Q6ZNG9 492 aa11.1□□□□□ -0.63
SHMT2-224ENST00000556737 GAREM2Q75VX8 874 aa11.1□□□□□ -0.63
SHMT2-224ENST00000556737 TRAPPC11Q7Z392 1133 aa11.1□□□□□ -0.63
SHMT2-224ENST00000556737 ADGRF2Q8IZF7 708 aa11.1□□□□□ -0.63
SHMT2-224ENST00000556737 TMEM86AQ8N2M4 240 aa11.1□□□□□ -0.63
SHMT2-224ENST00000556737 TOP6BLQ8N6T0 577 aa11.1□□□□□ -0.63
SHMT2-224ENST00000556737 RDH13Q8NBN7 331 aa11.1□□□□□ -0.63
SHMT2-224ENST00000556737 LEMD2Q8NC56 503 aa11.1□□□□□ -0.63
SHMT2-224ENST00000556737 SPATA18Q8TC71 538 aa11.1□□□□□ -0.63
SHMT2-224ENST00000556737 SPPL2BQ8TCT7 592 aa11.1□□□□□ -0.63
SHMT2-224ENST00000556737 KBTBD7Q8WVZ9 684 aa11.1□□□□□ -0.63
SHMT2-224ENST00000556737 ZNF516Q92618 1163 aa11.1□□□□□ -0.63
SHMT2-224ENST00000556737 PSMG2Q969U7 264 aa11.1□□□□□ -0.63
SHMT2-224ENST00000556737 ZNF512Q96ME7 567 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-224ENST00000556737 ZSWIM3Q96MP5 696 aa11.1□□□□□ -0.63
SHMT2-224ENST00000556737 ASB16Q96NS5 453 aa11.1□□□□□ -0.63
SHMT2-224ENST00000556737 LPIN3Q9BQK8 851 aa11.1□□□□□ -0.63
SHMT2-224ENST00000556737 MKNK1Q9BUB5 465 aa11.1□□□□□ -0.63
SHMT2-224ENST00000556737 PLA2G2FQ9BZM2 168 aa11.1□□□□□ -0.63
SHMT2-224ENST00000556737 MFSD1Q9H3U5 465 aa11.1□□□□□ -0.63
SHMT2-224ENST00000556737 ARHGEF3Q9NR81 526 aa11.1□□□□□ -0.63
SHMT2-224ENST00000556737 DMAC2Q9NW81 257 aa11.1□□□□□ -0.63
SHMT2-224ENST00000556737 SNX9Q9Y5X1 595 aa11.1□□□□□ -0.63
SHMT2-224ENST00000556737 A0A1W2PRU2 124 aa11.09□□□□□ -0.63
SHMT2-224ENST00000556737 GOLGA6L4A6NEF3 574 aa11.09□□□□□ -0.63
SHMT2-224ENST00000556737 TULP1O00294 542 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-224ENST00000556737 ZNF197O14709 1029 aa11.09□□□□□ -0.63
SHMT2-224ENST00000556737 PI15O43692 258 aa11.09□□□□□ -0.63
SHMT2-224ENST00000556737 HUS1O60921 280 aa11.09□□□□□ -0.63
SHMT2-224ENST00000556737 PRPF40AO75400 957 aaKnown RBP11.09□□□□□ -0.63
SHMT2-224ENST00000556737 DLATP10515 647 aaKnown RBP11.09□□□□□ -0.63
SHMT2-224ENST00000556737 HAPLN1P10915 354 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-224ENST00000556737 ACAT1P24752 427 aaKnown RBP11.09□□□□□ -0.63
SHMT2-224ENST00000556737 ALDH1A3P47895 512 aa11.09□□□□□ -0.63
SHMT2-224ENST00000556737 CASP4P49662 377 aa11.09□□□□□ -0.63
SHMT2-224ENST00000556737 GPR15P49685 360 aa11.09□□□□□ -0.63
SHMT2-224ENST00000556737 EPHB3P54753 998 aa11.09□□□□□ -0.63
SHMT2-224ENST00000556737 SMARCB1Q12824 385 aa11.09□□□□□ -0.63
SHMT2-224ENST00000556737 TEAD2Q15562 447 aa11.09□□□□□ -0.63
SHMT2-224ENST00000556737 DUOXA2Q1HG44 320 aa11.09□□□□□ -0.63
SHMT2-224ENST00000556737 STXBP5Q5T5C0 1151 aa11.09□□□□□ -0.63
SHMT2-224ENST00000556737 CYP4A22Q5TCH4 519 aa11.09□□□□□ -0.63
SHMT2-224ENST00000556737 TANGO2Q6ICL3 276 aa11.09□□□□□ -0.63
SHMT2-224ENST00000556737 SLC9A9Q8IVB4 645 aa11.09□□□□□ -0.63
SHMT2-224ENST00000556737 THEM5Q8N1Q8 247 aa11.09□□□□□ -0.63
SHMT2-224ENST00000556737 FLCNQ8NFG4 579 aa11.09□□□□□ -0.63
SHMT2-224ENST00000556737 GOLGA5Q8TBA6 731 aa11.09□□□□□ -0.63
SHMT2-224ENST00000556737 C2orf15Q8WU43 125 aaKnown RBP11.09□□□□□ -0.63
SHMT2-224ENST00000556737 ELSPBP1Q96BH3 223 aa11.09□□□□□ -0.63
SHMT2-224ENST00000556737 CCDC127Q96BQ5 260 aa11.09□□□□□ -0.63
SHMT2-224ENST00000556737 HPDLQ96IR7 371 aa11.09□□□□□ -0.63
SHMT2-224ENST00000556737 SEPT5Q99719 369 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-224ENST00000556737 ACBD6Q9BR61 282 aa11.09□□□□□ -0.63
SHMT2-224ENST00000556737 TBC1D17Q9HA65 648 aa11.09□□□□□ -0.63
SHMT2-224ENST00000556737 TRPV4Q9HBA0 871 aa11.09□□□□□ -0.63
SHMT2-224ENST00000556737 IL21Q9HBE4 155 aa11.09□□□□□ -0.63
SHMT2-224ENST00000556737 DDX43Q9NXZ2 648 aaKnown RBP11.09□□□□□ -0.63
SHMT2-224ENST00000556737 ABI2Q9NYB9 513 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-224ENST00000556737 ASB3Q9Y575 518 aa11.09□□□□□ -0.63
SHMT2-224ENST00000556737 NME7Q9Y5B8 376 aa11.09□□□□□ -0.63
SHMT2-224ENST00000556737 MIA3Q5JRA6 1907 aa11.09□□□□□ -0.63
SHMT2-224ENST00000556737 USP34Q70CQ2 3546 aa11.08□□□□□ -0.64
SHMT2-224ENST00000556737 GREB1Q4ZG55 1949 aa11.08□□□□□ -0.64
SHMT2-224ENST00000556737 SHISA7A6NL88 538 aa11.08□□□□□ -0.64
SHMT2-224ENST00000556737 LRRIQ3A6PVS8 624 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-224ENST00000556737 PDXKO00764 312 aa11.08□□□□□ -0.64
SHMT2-224ENST00000556737 GALR2O43603 387 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-224ENST00000556737 ZNF202O95125 648 aa11.08□□□□□ -0.64
SHMT2-224ENST00000556737 CST3P01034 146 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-224ENST00000556737 NR3C1P04150 777 aa11.08□□□□□ -0.64
SHMT2-224ENST00000556737 HOXD11P31277 338 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-224ENST00000556737 NUBP1P53384 320 aa11.08□□□□□ -0.64
SHMT2-224ENST00000556737 PTPN5P54829 565 aa11.08□□□□□ -0.64
SHMT2-224ENST00000556737 CLDN10P78369 228 aa11.08□□□□□ -0.64
SHMT2-224ENST00000556737 TSPY1Q01534 308 aa11.08□□□□□ -0.64
SHMT2-224ENST00000556737 MYO1EQ12965 1108 aa11.08□□□□□ -0.64
SHMT2-224ENST00000556737 MGAT5BQ3V5L5 792 aa11.08□□□□□ -0.64
SHMT2-224ENST00000556737 ZCWPW2Q504Y3 356 aa11.08□□□□□ -0.64
SHMT2-224ENST00000556737 TDRD10Q5VZ19 366 aaKnown RBP11.08□□□□□ -0.64
SHMT2-224ENST00000556737 DPH6Q7L8W6 267 aa11.08□□□□□ -0.64
SHMT2-224ENST00000556737 DNAJB7Q7Z6W7 309 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-224ENST00000556737 DCP1BQ8IZD4 617 aaKnown RBP11.08□□□□□ -0.64
SHMT2-224ENST00000556737 FMR1NBQ8N0W7 255 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-224ENST00000556737 STKLD1Q8NE28 680 aa11.08□□□□□ -0.64
SHMT2-224ENST00000556737 SMARCD2Q92925 531 aa11.08□□□□□ -0.64
SHMT2-224ENST00000556737 RSPRY1Q96DX4 576 aa11.08□□□□□ -0.64
SHMT2-224ENST00000556737 FNBP1Q96RU3 617 aa11.08□□□□□ -0.64
SHMT2-224ENST00000556737 PRRX2Q99811 253 aa11.08□□□□□ -0.64
SHMT2-224ENST00000556737 DDX23Q9BUQ8 820 aaKnown RBP11.08□□□□□ -0.64
SHMT2-224ENST00000556737 XYLT2Q9H1B5 865 aa11.08□□□□□ -0.64
SHMT2-224ENST00000556737 DLGAP2Q9P1A6 1054 aa11.08□□□□□ -0.64
SHMT2-224ENST00000556737 TRAF3IP3Q9Y228 551 aa11.08□□□□□ -0.64
SHMT2-224ENST00000556737 PCDHB5Q9Y5E4 795 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms