RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 PPEF2O14830 753 aa12.87□□□□□ -0.35
ACTN1-221ENST00000556571 OGTO15294 1046 aa12.87□□□□□ -0.35
ACTN1-221ENST00000556571 CYP11A1P05108 521 aa12.87□□□□□ -0.35
ACTN1-221ENST00000556571 ATF6P18850 670 aa12.87□□□□□ -0.35
ACTN1-221ENST00000556571 SCP2P22307 547 aa12.87□□□□□ -0.35
ACTN1-221ENST00000556571 AVPR1AP37288 418 aa12.87□□□□□ -0.35
ACTN1-221ENST00000556571 MPLP40238 635 aa12.87□□□□□ -0.35
ACTN1-221ENST00000556571 LIG4P49917 911 aa12.87□□□□□ -0.35
ACTN1-221ENST00000556571 NCKAP1LP55160 1127 aa12.87□□□□□ -0.35
ACTN1-221ENST00000556571 PLK5Q496M5 336 aa12.87□□□□□ -0.35
ACTN1-221ENST00000556571 HYIQ5T013 277 aa12.87□□□□□ -0.35
ACTN1-221ENST00000556571 THEM5Q8N1Q8 247 aa12.87□□□□□ -0.35
ACTN1-221ENST00000556571 OR10T2Q8NGX3 314 aa12.87□□□□□ -0.35
ACTN1-221ENST00000556571 C2orf15Q8WU43 125 aaKnown RBP12.87□□□□□ -0.35
ACTN1-221ENST00000556571 EXOC4Q96A65 974 aa12.87□□□□□ -0.35
ACTN1-221ENST00000556571 ZCWPW1Q9H0M4 648 aa12.87□□□□□ -0.35
ACTN1-221ENST00000556571 HPS4Q9NQG7 708 aa12.87□□□□□ -0.35
ACTN1-221ENST00000556571 SOBPA7XYQ1 873 aa12.86□□□□□ -0.35
ACTN1-221ENST00000556571 PIRO00625 290 aa12.86□□□□□ -0.35
ACTN1-221ENST00000556571 HNRNPDLO14979 420 aaKnown RBP12.86□□□□□ -0.35
ACTN1-221ENST00000556571 FAM189A1O60320 539 aa12.86□□□□□ -0.35
ACTN1-221ENST00000556571 RNF40O75150 1001 aa12.86□□□□□ -0.35
ACTN1-221ENST00000556571 PIGRP01833 764 aa12.86□□□□□ -0.35
ACTN1-221ENST00000556571 PROS1P07225 676 aa12.86□□□□□ -0.35
ACTN1-221ENST00000556571 DRD1P21728 446 aa12.86□□□□□ -0.35
ACTN1-221ENST00000556571 DDX6P26196 483 aaKnown RBP eCLIP12.86□□□□□ -0.35
ACTN1-221ENST00000556571 SLC12A3P55017 1021 aa12.86□□□□□ -0.35
ACTN1-221ENST00000556571 BFSP1Q12934 665 aa12.86□□□□□ -0.35
ACTN1-221ENST00000556571 FBXO43Q4G163 708 aa12.86□□□□□ -0.35
ACTN1-221ENST00000556571 C9orf57Q5W0N0 161 aa12.86□□□□□ -0.35
ACTN1-221ENST00000556571 RNF43Q68DV7 783 aa12.86□□□□□ -0.35
ACTN1-221ENST00000556571 JADE1Q6IE81 842 aa12.86□□□□□ -0.35
ACTN1-221ENST00000556571 CC2D1AQ6P1N0 951 aaPredicted RBP12.86□□□□□ -0.35
ACTN1-221ENST00000556571 METTL23Q86XA0 190 aa12.86□□□□□ -0.35
ACTN1-221ENST00000556571 SPPL2BQ8TCT7 592 aa12.86□□□□□ -0.35
ACTN1-221ENST00000556571 GIPC2Q8TF65 315 aa12.86□□□□□ -0.35
ACTN1-221ENST00000556571 USP13Q92995 863 aaPredicted RBP12.86□□□□□ -0.35
ACTN1-221ENST00000556571 FAM212AQ96EL1 285 aa12.86□□□□□ -0.35
ACTN1-221ENST00000556571 SMOC1Q9H4F8 434 aa12.86□□□□□ -0.35
ACTN1-221ENST00000556571 EBF3Q9H4W6 596 aa12.86□□□□□ -0.35
ACTN1-221ENST00000556571 KIF9Q9HAQ2 790 aa12.86□□□□□ -0.35
ACTN1-221ENST00000556571 TDP1Q9NUW8 608 aa12.86□□□□□ -0.35
ACTN1-221ENST00000556571 DERAQ9Y315 318 aa12.86□□□□□ -0.35
ACTN1-221ENST00000556571 PDCD11Q14690 1871 aaKnown RBP12.86□□□□□ -0.35
ACTN1-221ENST00000556571 GREB1Q4ZG55 1949 aa12.86□□□□□ -0.35
ACTN1-221ENST00000556571 A0A0B4J269 797 aa12.85□□□□□ -0.35
ACTN1-221ENST00000556571 ANO9A1A5B4 782 aa12.85□□□□□ -0.35
ACTN1-221ENST00000556571 OTOL1A6NHN0 477 aaPredicted RBP12.85□□□□□ -0.35
ACTN1-221ENST00000556571 RHOBTB1O94844 696 aa12.85□□□□□ -0.35
ACTN1-221ENST00000556571 EGFP01133 1207 aa12.85□□□□□ -0.35
ACTN1-221ENST00000556571 PLA2G4BP0C869 781 aa12.85□□□□□ -0.35
ACTN1-221ENST00000556571 HAPLN1P10915 354 aaPredicted RBP12.85□□□□□ -0.35
ACTN1-221ENST00000556571 GALK1P51570 392 aa12.85□□□□□ -0.35
ACTN1-221ENST00000556571 TMEM132DQ14C87 1099 aa12.85□□□□□ -0.35
ACTN1-221ENST00000556571 PDGFRLQ15198 375 aa12.85□□□□□ -0.35
ACTN1-221ENST00000556571 ELF2Q15723 593 aa12.85□□□□□ -0.35
ACTN1-221ENST00000556571 TRIM68Q6AZZ1 485 aa12.85□□□□□ -0.35
ACTN1-221ENST00000556571 MAB21L3Q8N8X9 362 aa12.85□□□□□ -0.35
ACTN1-221ENST00000556571 CHFRQ96EP1 664 aa12.85□□□□□ -0.35
ACTN1-221ENST00000556571 CDK5RAP3Q96JB5 506 aa12.85□□□□□ -0.35
ACTN1-221ENST00000556571 ZSCAN31Q96LW9 406 aaPredicted RBP12.85□□□□□ -0.35
ACTN1-221ENST00000556571 PNMA5Q96PV4 448 aa12.85□□□□□ -0.35
ACTN1-221ENST00000556571 P2RY13Q9BPV8 354 aa12.85□□□□□ -0.35
ACTN1-221ENST00000556571 MSTO1Q9BUK6 570 aa12.85□□□□□ -0.35
ACTN1-221ENST00000556571 DUSP15Q9H1R2 295 aaPredicted RBP12.85□□□□□ -0.35
ACTN1-221ENST00000556571 ASB7Q9H672 318 aa12.85□□□□□ -0.35
ACTN1-221ENST00000556571 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.85□□□□□ -0.35
ACTN1-221ENST00000556571 CPSF3Q9UKF6 684 aaKnown RBP12.85□□□□□ -0.35
ACTN1-221ENST00000556571 ODF2LQ9ULJ1 636 aa12.85□□□□□ -0.35
ACTN1-221ENST00000556571 TBX20Q9UMR3 447 aa12.85□□□□□ -0.35
ACTN1-221ENST00000556571 CCL26Q9Y258 94 aa12.85□□□□□ -0.35
ACTN1-221ENST00000556571 IGF2RP11717 2491 aa12.84□□□□□ -0.35
ACTN1-221ENST00000556571 ZFYVE26Q68DK2 2539 aa12.84□□□□□ -0.35
ACTN1-221ENST00000556571 NPHP3-ACAD11A0A0J9YXS1 232 aa12.84□□□□□ -0.35
ACTN1-221ENST00000556571 CYB561D2O14569 222 aa12.84□□□□□ -0.35
ACTN1-221ENST00000556571 F11P03951 625 aa12.84□□□□□ -0.35
ACTN1-221ENST00000556571 NLRP12P59046 1061 aa12.84□□□□□ -0.35
ACTN1-221ENST00000556571 ZNF268Q14587 947 aaPredicted RBP12.84□□□□□ -0.35
ACTN1-221ENST00000556571 KARSQ15046 597 aaKnown RBP12.84□□□□□ -0.35
ACTN1-221ENST00000556571 ARSHQ5FYA8 562 aa12.84□□□□□ -0.35
ACTN1-221ENST00000556571 PSAPL1Q6NUJ1 521 aa12.84□□□□□ -0.35
ACTN1-221ENST00000556571 SYT13Q7L8C5 426 aa12.84□□□□□ -0.35
ACTN1-221ENST00000556571 TMEM150AQ86TG1 271 aa12.84□□□□□ -0.35
ACTN1-221ENST00000556571 LRRTM3Q86VH5 581 aa12.84□□□□□ -0.35
ACTN1-221ENST00000556571 MON1AQ86VX9 555 aa12.84□□□□□ -0.35
ACTN1-221ENST00000556571 DCP1BQ8IZD4 617 aaKnown RBP12.84□□□□□ -0.35
ACTN1-221ENST00000556571 MRPS31Q92665 395 aaKnown RBP12.84□□□□□ -0.35
ACTN1-221ENST00000556571 HHIPQ96QV1 700 aa12.84□□□□□ -0.35
ACTN1-221ENST00000556571 PLIN2Q99541 437 aa12.84□□□□□ -0.35
ACTN1-221ENST00000556571 PYM1Q9BRP8 204 aaKnown RBP12.84□□□□□ -0.35
ACTN1-221ENST00000556571 EDEM2Q9BV94 578 aa12.84□□□□□ -0.35
ACTN1-221ENST00000556571 FBRSL1Q9HCM7 1045 aaKnown RBP12.84□□□□□ -0.35
ACTN1-221ENST00000556571 EBF1Q9UH73 591 aa12.84□□□□□ -0.35
ACTN1-221ENST00000556571 NUP210Q8TEM1 1887 aaPredicted RBP12.83□□□□□ -0.36
ACTN1-221ENST00000556571 BCLAF3A2AJT9 711 aaKnown RBP12.83□□□□□ -0.36
ACTN1-221ENST00000556571 APBB3O95704 486 aa12.83□□□□□ -0.36
ACTN1-221ENST00000556571 CAVIN2O95810 425 aa12.83□□□□□ -0.36
ACTN1-221ENST00000556571 NFICP08651 508 aa12.83□□□□□ -0.36
ACTN1-221ENST00000556571 CSH1P0DML2 217 aa12.83□□□□□ -0.36
ACTN1-221ENST00000556571 CSH2P0DML3 217 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms