RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 OR10T2Q8NGX3 314 aa18.59■□□□□ 0.57
TUBB3-211ENST00000556536 SPATA18Q8TC71 538 aa18.59■□□□□ 0.57
TUBB3-211ENST00000556536 MRFAP1L1Q96HT8 127 aa18.59■□□□□ 0.57
TUBB3-211ENST00000556536 TMEM209Q96SK2 561 aa18.59■□□□□ 0.57
TUBB3-211ENST00000556536 TTYH3Q9C0H2 523 aa18.59■□□□□ 0.57
TUBB3-211ENST00000556536 DPEP3Q9H4B8 488 aa18.59■□□□□ 0.57
TUBB3-211ENST00000556536 PRDM12Q9H4Q4 367 aa18.59■□□□□ 0.57
TUBB3-211ENST00000556536 ENTPD7Q9NQZ7 604 aa18.59■□□□□ 0.57
TUBB3-211ENST00000556536 MRPL17Q9NRX2 175 aaKnown RBP18.59■□□□□ 0.57
TUBB3-211ENST00000556536 MTRRQ9UBK8 725 aa18.59■□□□□ 0.57
TUBB3-211ENST00000556536 FBXL5Q9UKA1 691 aa18.59■□□□□ 0.57
TUBB3-211ENST00000556536 BARX2Q9UMQ3 279 aaPredicted RBP18.59■□□□□ 0.57
TUBB3-211ENST00000556536 ITIH6Q6UXX5 1313 aa18.58■□□□□ 0.57
TUBB3-211ENST00000556536 HIDE1A8MVS5 230 aa18.58■□□□□ 0.56
TUBB3-211ENST00000556536 A8MXQ7 604 aa18.58■□□□□ 0.56
TUBB3-211ENST00000556536 RNF225M0QZC1 329 aaPredicted RBP18.58■□□□□ 0.56
TUBB3-211ENST00000556536 CILPO75339 1184 aa18.58■□□□□ 0.56
TUBB3-211ENST00000556536 TRIM21P19474 475 aaKnown RBP18.58■□□□□ 0.56
TUBB3-211ENST00000556536 RFX1P22670 979 aa18.58■□□□□ 0.56
TUBB3-211ENST00000556536 CA8P35219 290 aa18.58■□□□□ 0.56
TUBB3-211ENST00000556536 PLA2G5P39877 138 aa18.58■□□□□ 0.56
TUBB3-211ENST00000556536 DRAP1Q14919 205 aaPredicted RBP18.58■□□□□ 0.56
TUBB3-211ENST00000556536 CCDC142Q17RM4 750 aa18.58■□□□□ 0.56
TUBB3-211ENST00000556536 CTXN3Q4LDR2 81 aa18.58■□□□□ 0.56
TUBB3-211ENST00000556536 SPECC1LQ69YQ0 1117 aa18.58■□□□□ 0.56
TUBB3-211ENST00000556536 ZNF280DQ6N043 979 aa18.58■□□□□ 0.56
TUBB3-211ENST00000556536 THEM5Q8N1Q8 247 aa18.58■□□□□ 0.56
TUBB3-211ENST00000556536 MICAL1Q8TDZ2 1067 aa18.58■□□□□ 0.56
TUBB3-211ENST00000556536 SHC3Q92529 594 aa18.58■□□□□ 0.56
TUBB3-211ENST00000556536 JAKMIP2Q96AA8 810 aa18.58■□□□□ 0.56
TUBB3-211ENST00000556536 FAM81BQ96LP2 452 aa18.58■□□□□ 0.56
TUBB3-211ENST00000556536 LPIN3Q9BQK8 851 aa18.58■□□□□ 0.56
TUBB3-211ENST00000556536 STK33Q9BYT3 514 aa18.58■□□□□ 0.56
TUBB3-211ENST00000556536 ELOVL4Q9GZR5 314 aa18.58■□□□□ 0.56
TUBB3-211ENST00000556536 RAPGEFL1Q9UHV5 662 aa18.58■□□□□ 0.56
TUBB3-211ENST00000556536 PCDHB4Q9Y5E5 795 aa18.58■□□□□ 0.56
TUBB3-211ENST00000556536 BACE2Q9Y5Z0 518 aa18.58■□□□□ 0.56
TUBB3-211ENST00000556536 XIRP2A4UGR9 3374 aa18.58■□□□□ 0.56
TUBB3-211ENST00000556536 NLRC5Q86WI3 1866 aa18.57■□□□□ 0.56
TUBB3-211ENST00000556536 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.57■□□□□ 0.56
TUBB3-211ENST00000556536 H7C4K7 107 aa18.57■□□□□ 0.56
TUBB3-211ENST00000556536 FOXN3O00409 490 aaPredicted RBP18.57■□□□□ 0.56
TUBB3-211ENST00000556536 ATP2C2O75185 946 aa18.57■□□□□ 0.56
TUBB3-211ENST00000556536 OR4Q2P0C623 313 aa18.57■□□□□ 0.56
TUBB3-211ENST00000556536 YWHAEP62258 255 aaKnown RBP18.57■□□□□ 0.56
TUBB3-211ENST00000556536 SMC1AQ14683 1233 aaKnown RBP18.57■□□□□ 0.56
TUBB3-211ENST00000556536 ZNF394Q53GI3 561 aa18.57■□□□□ 0.56
TUBB3-211ENST00000556536 TMEM270Q6UE05 265 aa18.57■□□□□ 0.56
TUBB3-211ENST00000556536 TMC6Q7Z403 805 aa18.57■□□□□ 0.56
TUBB3-211ENST00000556536 GPR65Q8IYL9 337 aa18.57■□□□□ 0.56
TUBB3-211ENST00000556536 MRPL43Q8N983 215 aaKnown RBP18.57■□□□□ 0.56
TUBB3-211ENST00000556536 UHRF1Q96T88 793 aaPredicted RBP18.57■□□□□ 0.56
TUBB3-211ENST00000556536 CLSTN3Q9BQT9 956 aa18.57■□□□□ 0.56
TUBB3-211ENST00000556536 LMAN2LQ9H0V9 348 aa18.57■□□□□ 0.56
TUBB3-211ENST00000556536 RXFP1Q9HBX9 757 aa18.57■□□□□ 0.56
TUBB3-211ENST00000556536 NGRNQ9NPE2 291 aaKnown RBP18.57■□□□□ 0.56
TUBB3-211ENST00000556536 CEP72Q9P209 647 aa18.57■□□□□ 0.56
TUBB3-211ENST00000556536 CNTN6Q9UQ52 1028 aa18.57■□□□□ 0.56
TUBB3-211ENST00000556536 PLXNA4Q9HCM2 1894 aa18.56■□□□□ 0.56
TUBB3-211ENST00000556536 C2orf71A6NGG8 1288 aa18.56■□□□□ 0.56
TUBB3-211ENST00000556536 F8VZ95 297 aa18.56■□□□□ 0.56
TUBB3-211ENST00000556536 CALCAP01258 141 aa18.56■□□□□ 0.56
TUBB3-211ENST00000556536 GYPCP04921 128 aa18.56■□□□□ 0.56
TUBB3-211ENST00000556536 CNPP09543 421 aaKnown RBP18.56■□□□□ 0.56
TUBB3-211ENST00000556536 KRT5P13647 590 aa18.56■□□□□ 0.56
TUBB3-211ENST00000556536 MRE11P49959 708 aa18.56■□□□□ 0.56
TUBB3-211ENST00000556536 CDR1P51861 262 aa18.56■□□□□ 0.56
TUBB3-211ENST00000556536 RAD23BP54727 409 aa18.56■□□□□ 0.56
TUBB3-211ENST00000556536 JAM2P57087 298 aa18.56■□□□□ 0.56
TUBB3-211ENST00000556536 PSMC1P62191 440 aaKnown RBP18.56■□□□□ 0.56
TUBB3-211ENST00000556536 FIGNQ5HY92 759 aa18.56■□□□□ 0.56
TUBB3-211ENST00000556536 PDXDC1Q6P996 788 aa18.56■□□□□ 0.56
TUBB3-211ENST00000556536 ACOT1Q86TX2 421 aa18.56■□□□□ 0.56
TUBB3-211ENST00000556536 LRRTM3Q86VH5 581 aa18.56■□□□□ 0.56
TUBB3-211ENST00000556536 UNC93AQ86WB7 457 aa18.56■□□□□ 0.56
TUBB3-211ENST00000556536 GPIHBP1Q8IV16 184 aa18.56■□□□□ 0.56
TUBB3-211ENST00000556536 GLYCTKQ8IVS8 523 aa18.56■□□□□ 0.56
TUBB3-211ENST00000556536 TTC39CQ8N584 583 aa18.56■□□□□ 0.56
TUBB3-211ENST00000556536 SLC4A11Q8NBS3 891 aa18.56■□□□□ 0.56
TUBB3-211ENST00000556536 RBBP8NLQ8NC74 664 aaPredicted RBP18.56■□□□□ 0.56
TUBB3-211ENST00000556536 CPLX3Q8WVH0 158 aa18.56■□□□□ 0.56
TUBB3-211ENST00000556536 BAP1Q92560 729 aa18.56■□□□□ 0.56
TUBB3-211ENST00000556536 SYT15Q9BQS2 421 aa18.56■□□□□ 0.56
TUBB3-211ENST00000556536 ACBD6Q9BR61 282 aa18.56■□□□□ 0.56
TUBB3-211ENST00000556536 NUP58Q9BVL2 599 aa18.56■□□□□ 0.56
TUBB3-211ENST00000556536 FAM124BQ9H5Z6 455 aaPredicted RBP18.56■□□□□ 0.56
TUBB3-211ENST00000556536 SSX2IPQ9Y2D8 614 aa18.56■□□□□ 0.56
TUBB3-211ENST00000556536 DAAM1Q9Y4D1 1078 aa18.56■□□□□ 0.56
TUBB3-211ENST00000556536 IRAK3Q9Y616 596 aa18.56■□□□□ 0.56
TUBB3-211ENST00000556536 CDY1Q9Y6F8 540 aa18.56■□□□□ 0.56
TUBB3-211ENST00000556536 OR6C75A6NL08 312 aa18.55■□□□□ 0.56
TUBB3-211ENST00000556536 TEX28O15482 410 aa18.55■□□□□ 0.56
TUBB3-211ENST00000556536 PTPN1P18031 435 aaKnown RBP18.55■□□□□ 0.56
TUBB3-211ENST00000556536 PCSK1P29120 753 aa18.55■□□□□ 0.56
TUBB3-211ENST00000556536 OR1D2P34982 312 aa18.55■□□□□ 0.56
TUBB3-211ENST00000556536 USP8P40818 1118 aa18.55■□□□□ 0.56
TUBB3-211ENST00000556536 ZNF132P52740 706 aa18.55■□□□□ 0.56
TUBB3-211ENST00000556536 ARPP19P56211 112 aa18.55■□□□□ 0.56
TUBB3-211ENST00000556536 SLC8B1Q6J4K2 584 aa18.55■□□□□ 0.56
TUBB3-211ENST00000556536 CACNA2D4Q7Z3S7 1137 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms