RNA–Protein interactions for RNA: ENST00000556516.1

PCNX1-212, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-212ENST00000556516 LPXNO60711 386 aa5.7□□□□□ -1.5
PCNX1-212ENST00000556516 ERN1O75460 977 aaKnown RBP5.7□□□□□ -1.5
PCNX1-212ENST00000556516 PIK3CBP42338 1070 aa5.7□□□□□ -1.5
PCNX1-212ENST00000556516 UCP3P55916 312 aa5.7□□□□□ -1.5
PCNX1-212ENST00000556516 BOP1Q14137 746 aaKnown RBP5.7□□□□□ -1.5
PCNX1-212ENST00000556516 HABP2Q14520 560 aaPredicted RBP5.7□□□□□ -1.5
PCNX1-212ENST00000556516 POLD3Q15054 466 aaPredicted RBP5.7□□□□□ -1.5
PCNX1-212ENST00000556516 EMC10Q5UCC4 262 aa5.7□□□□□ -1.5
PCNX1-212ENST00000556516 B3GNTL1Q67FW5 361 aaPredicted RBP5.7□□□□□ -1.5
PCNX1-212ENST00000556516 TAPT1Q6NXT6 567 aa5.7□□□□□ -1.5
PCNX1-212ENST00000556516 RNF207Q6ZRF8 634 aa5.7□□□□□ -1.5
PCNX1-212ENST00000556516 SESTD1Q86VW0 696 aa5.7□□□□□ -1.5
PCNX1-212ENST00000556516 PDSS2Q86YH6 399 aa5.7□□□□□ -1.5
PCNX1-212ENST00000556516 LIX1LQ8IVB5 337 aa5.7□□□□□ -1.5
PCNX1-212ENST00000556516 MPP5Q8N3R9 675 aa5.7□□□□□ -1.5
PCNX1-212ENST00000556516 AOPEPQ8N6M6 819 aa5.7□□□□□ -1.5
PCNX1-212ENST00000556516 SH3RF3Q8TEJ3 882 aaPredicted RBP5.7□□□□□ -1.5
PCNX1-212ENST00000556516 ZNF483Q8TF39 744 aaPredicted RBP5.7□□□□□ -1.5
PCNX1-212ENST00000556516 SCAMP4Q969E2 229 aa5.7□□□□□ -1.5
PCNX1-212ENST00000556516 RNF31Q96EP0 1072 aa5.7□□□□□ -1.5
PCNX1-212ENST00000556516 PLEKHG4BQ96PX9 1271 aa5.7□□□□□ -1.5
PCNX1-212ENST00000556516 TTYH3Q9C0H2 523 aa5.7□□□□□ -1.5
PCNX1-212ENST00000556516 REXO4Q9GZR2 422 aaKnown RBP5.7□□□□□ -1.5
PCNX1-212ENST00000556516 RNPEPQ9H4A4 650 aa5.7□□□□□ -1.5
PCNX1-212ENST00000556516 AKIP1Q9NQ31 210 aa5.7□□□□□ -1.5
PCNX1-212ENST00000556516 CNOT11Q9UKZ1 510 aaKnown RBP5.7□□□□□ -1.5
PCNX1-212ENST00000556516 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.7□□□□□ -1.5
PCNX1-212ENST00000556516 MTO1Q9Y2Z2 717 aaKnown RBP5.7□□□□□ -1.5
PCNX1-212ENST00000556516 TSC22D4Q9Y3Q8 395 aa5.7□□□□□ -1.5
PCNX1-212ENST00000556516 SNX13Q9Y5W8 968 aa5.7□□□□□ -1.5
PCNX1-212ENST00000556516 F8W8V4 182 aa5.69□□□□□ -1.5
PCNX1-212ENST00000556516 POLRMTO00411 1230 aaKnown RBP5.69□□□□□ -1.5
PCNX1-212ENST00000556516 BTN3A1O00481 513 aa5.69□□□□□ -1.5
PCNX1-212ENST00000556516 TRIM24O15164 1050 aa5.69□□□□□ -1.5
PCNX1-212ENST00000556516 RECQL4O94761 1208 aa5.69□□□□□ -1.5
PCNX1-212ENST00000556516 NDUFA10O95299 355 aa5.69□□□□□ -1.5
PCNX1-212ENST00000556516 ABHD16AO95870 558 aa5.69□□□□□ -1.5
PCNX1-212ENST00000556516 GPANK1O95872 356 aa5.69□□□□□ -1.5
PCNX1-212ENST00000556516 GRPP07492 148 aa5.69□□□□□ -1.5
PCNX1-212ENST00000556516 ZKSCAN1P17029 563 aaPredicted RBP5.69□□□□□ -1.5
PCNX1-212ENST00000556516 FMO1Q01740 532 aa5.69□□□□□ -1.5
PCNX1-212ENST00000556516 SLC13A2Q13183 592 aa5.69□□□□□ -1.5
PCNX1-212ENST00000556516 CTBP1Q13363 440 aa5.69□□□□□ -1.5
PCNX1-212ENST00000556516 CNGA2Q16280 664 aa5.69□□□□□ -1.5
PCNX1-212ENST00000556516 LONRF1Q17RB8 773 aa5.69□□□□□ -1.5
PCNX1-212ENST00000556516 SPATS1Q496A3 300 aa5.69□□□□□ -1.5
PCNX1-212ENST00000556516 SKAP1Q86WV1 359 aa5.69□□□□□ -1.5
PCNX1-212ENST00000556516 ZNF276Q8N554 614 aa5.69□□□□□ -1.5
PCNX1-212ENST00000556516 APIPQ96GX9 242 aa5.69□□□□□ -1.5
PCNX1-212ENST00000556516 DCLRE1CQ96SD1 692 aaKnown RBP5.69□□□□□ -1.5
PCNX1-212ENST00000556516 PNKPQ96T60 521 aa5.69□□□□□ -1.5
PCNX1-212ENST00000556516 LRRC27Q9C0I9 530 aa5.69□□□□□ -1.5
PCNX1-212ENST00000556516 SLC2A4RGQ9NR83 387 aa5.69□□□□□ -1.5
PCNX1-212ENST00000556516 RLIMQ9NVW2 624 aa5.69□□□□□ -1.5
PCNX1-212ENST00000556516 CTTNBP2NLQ9P2B4 639 aa5.69□□□□□ -1.5
PCNX1-212ENST00000556516 OGDHLQ9ULD0 1010 aa5.69□□□□□ -1.5
PCNX1-212ENST00000556516 MED16Q9Y2X0 877 aa5.69□□□□□ -1.5
PCNX1-212ENST00000556516 PREX2Q70Z35 1606 aa5.69□□□□□ -1.5
PCNX1-212ENST00000556516 DHX29Q7Z478 1369 aaKnown RBP5.68□□□□□ -1.5
PCNX1-212ENST00000556516 TTC37Q6PGP7 1564 aa5.68□□□□□ -1.5
PCNX1-212ENST00000556516 ERBINQ96RT1 1412 aa5.68□□□□□ -1.5
PCNX1-212ENST00000556516 TRAPPC8Q9Y2L5 1435 aa5.68□□□□□ -1.5
PCNX1-212ENST00000556516 RIMBP3CA6NJZ7 1639 aa5.68□□□□□ -1.5
PCNX1-212ENST00000556516 RIMBP3BA6NNM3 1639 aa5.68□□□□□ -1.5
PCNX1-212ENST00000556516 ABCA9Q8IUA7 1624 aa5.68□□□□□ -1.5
PCNX1-212ENST00000556516 RIMBP3Q9UFD9 1639 aa5.68□□□□□ -1.5
PCNX1-212ENST00000556516 PIM1P11309 404 aaPredicted RBP5.68□□□□□ -1.5
PCNX1-212ENST00000556516 EN2P19622 333 aaPredicted RBP5.68□□□□□ -1.5
PCNX1-212ENST00000556516 SLC11A2P49281 568 aa5.68□□□□□ -1.5
PCNX1-212ENST00000556516 PRIM2P49643 509 aa5.68□□□□□ -1.5
PCNX1-212ENST00000556516 TOB1P50616 345 aaPredicted RBP5.68□□□□□ -1.5
PCNX1-212ENST00000556516 ARFIP2P53365 341 aa5.68□□□□□ -1.5
PCNX1-212ENST00000556516 KRTAP10-2P60368 255 aa5.68□□□□□ -1.5
PCNX1-212ENST00000556516 RPS16P62249 146 aaKnown RBP5.68□□□□□ -1.5
PCNX1-212ENST00000556516 GEN1Q17RS7 908 aa5.68□□□□□ -1.5
PCNX1-212ENST00000556516 CD300EQ496F6 205 aaPredicted RBP5.68□□□□□ -1.5
PCNX1-212ENST00000556516 ZNF783Q6ZMS7 281 aa5.68□□□□□ -1.5
PCNX1-212ENST00000556516 SLC15A4Q8N697 577 aa5.68□□□□□ -1.5
PCNX1-212ENST00000556516 OR6B3Q8NGW1 331 aa5.68□□□□□ -1.5
PCNX1-212ENST00000556516 TMEM125Q96AQ2 219 aa5.68□□□□□ -1.5
PCNX1-212ENST00000556516 NACC2Q96BF6 587 aa5.68□□□□□ -1.5
PCNX1-212ENST00000556516 TRIB1Q96RU8 372 aa5.68□□□□□ -1.5
PCNX1-212ENST00000556516 CDK5RAP1Q96SZ6 601 aaKnown RBP5.68□□□□□ -1.5
PCNX1-212ENST00000556516 SMOQ99835 787 aa5.68□□□□□ -1.5
PCNX1-212ENST00000556516 C1QTNF3Q9BXJ4 246 aa5.68□□□□□ -1.5
PCNX1-212ENST00000556516 KRTAP9-9Q9BYP9 154 aa5.68□□□□□ -1.5
PCNX1-212ENST00000556516 KRTAP9-4Q9BYQ2 154 aa5.68□□□□□ -1.5
PCNX1-212ENST00000556516 SMURF2Q9HAU4 748 aa5.68□□□□□ -1.5
PCNX1-212ENST00000556516 ZNF287Q9HBT7 754 aa5.68□□□□□ -1.5
PCNX1-212ENST00000556516 KIAA1586Q9HCI6 787 aa5.68□□□□□ -1.5
PCNX1-212ENST00000556516 ETAA1Q9NY74 926 aa5.68□□□□□ -1.5
PCNX1-212ENST00000556516 FNIP2Q9P278 1114 aa5.68□□□□□ -1.5
PCNX1-212ENST00000556516 PHTF1Q9UMS5 762 aa5.68□□□□□ -1.5
PCNX1-212ENST00000556516 TESMINQ9Y4I5 508 aa5.68□□□□□ -1.5
PCNX1-212ENST00000556516 FPGT-TNNI3KV9GXZ4 949 aa5.68□□□□□ -1.5
PCNX1-212ENST00000556516 DENND4BO75064 1496 aaPredicted RBP5.68□□□□□ -1.5
PCNX1-212ENST00000556516 ZNF518AQ6AHZ1 1483 aa5.68□□□□□ -1.5
PCNX1-212ENST00000556516 TEX14Q8IWB6 1497 aa5.68□□□□□ -1.5
PCNX1-212ENST00000556516 DUOX2Q9NRD8 1548 aa5.68□□□□□ -1.5
PCNX1-212ENST00000556516 CDC42BPAQ5VT25 1732 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms